Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_006879.1 Length=34450 Score E Sequences producing significant alignments: (Bits) Value seq3063 367 3e-97 >seq3063 Length=7092 Score = 367 bits (406), Expect = 3e-97 Identities = 334/421 (79%), Gaps = 0/421 (0%) Strand=Plus/Plus Query 10585 GGTGAGCGCGTACGAGCAGACGGTGAACGAGGAGCGCAACTTCCAAAAGAGCTTTAACAA 10644 ||| | |||||||||||||||||||||| ||||| ||||| ||||| ||||||||||| Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 10645 TCACGTGAGGACCCTGATCGCGAGGGAGGAGGTGACCATCGGGCTGATGCATCTGTGGGA 10704 |||||| | || || | ||| | ||||||||| | || || ||||||||||||||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 10705 CTTCGTGGAGGCCTACGTGCAGAACCCGGCCAGCAAACCTCTGACGGCCCAGCTGTTCCT 10764 ||| || || | ||| ||||| ||||| || || | ||| ||||||||||| Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851 Query 10765 GATCGTGCAGCACAGCCGCGACAACGAGACGTTCCGCGACGCCATGTTGAACATCGCGGA 10824 || |||||||||||| | ||||||||| | ||| | || || || | ||||| | || Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911 Query 10825 GCCCGAGGGTCGCTGGCTCTTGGATCTGATTAACATCCTGCAGAGCATCGTGGTGCAGGA 10884 ||||||||| |||||||| | ||| |||| ||||| ||||||||||| ||||||||||| Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971 Query 10885 GAGGGGCCTCAGCTTAGCGGACAAGGTGGCGGCCATTAACTATTCGATGCAGAGCCTGGG 10944 | | || | ||| | || ||||||||||| |||||||||||||| |||| || ||||| Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031 Query 10945 GAAGTTCTACGCTCGCAAGATCTACAAGAGCCCTTACGTGCCCATAGACAAGGAGGTGAA 11004 ||||| ||||| |||||||| ||| | | ||||||||| ||||||||||||||||| || Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091 Query 11005 G 11005 | Sbjct 7092 G 7092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110112765310296