Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 111 2e-19
>seq1351
Length=825266
Score = 111 bits (122), Expect = 2e-19
Identities = 160/219 (73%), Gaps = 5/219 (2%)
Strand=Plus/Plus
Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536
|| |||||| || | || |||| |||||||| || | ||||||| || || || |
Sbjct 601374 ATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAAGTCAATC 601432
Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595
||||||| | |||| ||||| |||||||||||||| ||||| ||| ||||| || ||
Sbjct 601433 CGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 601491
Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGAT-TCTTTATCCAA 21654
|| |||||||| || ||||| |||| || ||||| || |||||| | |||| | |
Sbjct 601492 ATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGTAGCTGTCTTGCTGC-C 601550
Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACA 21693
||||| | | ||||| | |||||| | |||| |||
Sbjct 601551 GATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACA 601589
Score = 95.1 bits (104), Expect = 1e-14
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 21125 ATTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATT 21184
|||||||| ||||||||||| | ||||||||| || || | ||| | ||||
Sbjct 599399 ATTTAAAATTCAGCATCTAAAGTGAAAACATTGTCCATAGGTTGCGCCATCACTCCCCAC 599458
Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATAT-AGA 21243
|| || || || | |||| | || || || |||||||| || ||||||||||| || |||
Sbjct 599459 TTCTGGTATTCTCCAACTTTCTTCTCAAAGAAATTTGTTTTGCCTTCCAATGAGATGAGA 599518
Query 21244 TTCCATAAAATCAAATGGATT 21264
|| ||||||||| ||||||||
Sbjct 599519 TT-CATAAAATCGAATGGATT 599538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531872150493160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |