Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 518 4e-142
seq1351 91.5 2e-13
>seq3345
Length=207354
Score = 518 bits (574), Expect = 4e-142
Identities = 1101/1623 (68%), Gaps = 43/1623 (3%)
Strand=Plus/Minus
Query 61975 TTATTTTATCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGAT 62034
|||||||| | ||||| | || || ||||| | | | ||| ||||| || |||| |
Sbjct 113397 TTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGT 113338
Query 62035 AGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGG 62094
|||||||||| ||||||| ||| | |||| ||| ||||| || ||| |||||
Sbjct 113337 AGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTC 113278
Query 62095 AATAACTCGGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCC 62154
||| | || | || | ||| || || | |||||||||||| || || || ||||| |
Sbjct 113277 CATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTC 113218
Query 62155 TGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACT 62213
| || || ||||| | |||| || || ||| ||| ||||| | ||||| || || |
Sbjct 113217 TATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAAT 113158
Query 62214 CGCTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCCATAATC 62270
| |||| | |||| |||| ||| | |||| | || |||||| | |||||
Sbjct 113157 CTCTTATT-TCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATA 113099
Query 62271 CTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGA 62330
||| || || || |||| ||| || | | || ||| | | || ||||| |
Sbjct 113098 AGATTTTTCATATCTTCATCCCACAAATCAGCCCGAGTCAAATCAGTCAGAAGATGATGG 113039
Query 62331 TTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGT 62390
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 113038 TTCACTACAGGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGT 112979
Query 62391 TCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 62450
|| | || ||| | || || | |||||| ||||| || ||||||||||| || || | |
Sbjct 112978 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATC 112919
Query 62451 AATAAACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCC 62508
|||| | ||| | | ||| ||||| || || || ||||| || | |||| | ||
Sbjct 112918 AATAGAGAATTGCGCAAACC--ATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCC 112861
Query 62509 AAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTAC 62567
|||| || | || || || ||||| | || || | ||
Sbjct 112860 AAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGAC 112801
Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627
||| |||||| ||||| ||||| || ||||||| ||||||||| || ||||||
Sbjct 112800 TC-CCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAAT 112742
Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687
||||| |||||||| ||||| || || | | ||| ||| | ||||| | || ||
Sbjct 112741 GCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCG 112682
Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747
| | | | | | | |||||| || || | || |||||||||||||| ||||||
Sbjct 112681 TAAGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGT 112622
Query 62748 CTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATT 62807
||||||||| |||| || ||| ||||| || | ||||||| |||||| ||| |||| |
Sbjct 112621 CTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACT 112562
Query 62808 TTATTGAGATTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT 62864
|| || | |||| | ||||| ||||| | || || | ||| ||||| ||||
Sbjct 112561 TTGTTTAAATTTTGAGTTACAAT--CTTTGTG-ATTTCTTTTAATTTTTTAAAATTAAAT 112505
Query 62865 CGCCCATCTATTACAAACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCA 62924
| || | ||||||||||| | || | || || || || || || || || |||
Sbjct 112504 CTATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCA 112445
Query 62925 TTAGCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCT 62981
| | || | | ||||| | | ||||||||||||||| ||||| || ||||| ||
Sbjct 112444 T---CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCA 112388
Query 62982 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 63041
| ||||| ||||||||||||| ||||||| ||||||||||| | ||| |||| ||||||
Sbjct 112387 AGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCA 112328
Query 63042 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 63101
|| || | || | ||||||||| | ||||| | || |||| | | | | |||
Sbjct 112327 GTCTCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTT--GTTTTA 112270
Query 63102 TATCTCCTTTCTCTT--TCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 63159
|| || ||| |||| || ||| | ||| | | ||| || || ||||| || ||
Sbjct 112269 TAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCA-AAGCAG 112211
Query 63160 TGTCCAAT-CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC--- 63215
| | | |||||||| |||| |||||||| | ||| || ||||||||
Sbjct 112210 TCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACT---TCATCCTTTTCT 112154
Query 63216 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGT 63275
|||| ||||||||| ||||| || ||||| | || ||| || ||||| | ||| |
Sbjct 112153 ACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATT 112094
Query 63276 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63335
|| || || || || ||||| || | ||| | ||| | | || || | |||||| ||
Sbjct 112093 TCTTCCTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGC 112034
Query 63336 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63395
|| || || || || | | || || ||||||||||| || ||||||| ||||| ||
Sbjct 112033 TCTAAATAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCA 111974
Query 63396 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63455
|| || ||||| |||||||||||||| | | ||| || || | ||||| || || |
Sbjct 111973 GTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCT 111914
Query 63456 ATATAGCTTCCACTG-GCACGAAT---ATTACTAATTGATAGACCTATTCCCCCTGCCAT 63511
|| || || ||| || | || || || || || |||||| || || ||
Sbjct 111913 ATGTAAGAACC-CTGAGCTCTGATGCAATGTGTA--TG-TAAACCTATGCCACCAGCAGA 111858
Query 63512 TTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGAT 63571
|||||| |||||||| ||| ||||||| || ||| | ||||| || |||||||| || |
Sbjct 111857 TTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTT 111798
Query 63572 CAT 63574
|||
Sbjct 111797 CAT 111795
Score = 102 bits (112), Expect = 1e-16
Identities = 89/111 (80%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 63755 CTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63814
||| |||||||| |||||||| || ||| ||||||||||||| ||||||||||| |||||
Sbjct 111270 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTGAAACCAAAATAATTGTA 111211
Query 63815 TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865
| ||| |||| || |||| |||| | |||| | ||| ||||| | |||
Sbjct 111210 TTTAAAATCTCTATCATAAACAATAGCAGAGTCTAATTTGTCCTTGTTTTT 111160
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 63966 TTTTTTGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCC 64025
|| || || || || |||| ||| |||| ||||||||||| || | ||||||||||||
Sbjct 110521 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCG 110462
Query 64026 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTT 64085
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 110461 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 110402
Query 64086 GTTACTCCATTATATATTCC 64105
||||| ||| |||||| ||
Sbjct 110401 GTTACACCAGAATATATGCC 110382
>seq1351
Length=825266
Score = 91.5 bits (100), Expect = 2e-13
Identities = 85/108 (79%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
|| |||| ||||||||||| | |||||||| ||||| || || ||||||||||| | |
Sbjct 602570 TTGGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 602629
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 33897
|| || || ||||||||||||||| |||||||| | | ||||||
Sbjct 602630 CATATATCTGGATATTGGATTGGGAATATAACAAAACGTCTAGGATTT 602677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622913646506440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |