Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3463 325 4e-84 seq3345 170 2e-37 seq3424 125 7e-24 seq4254 111 2e-19 seq2787 104 2e-17 >seq3463 Length=282612 Score = 325 bits (360), Expect = 4e-84 Identities = 812/1221 (67%), Gaps = 38/1221 (3%) Strand=Plus/Minus Query 62039 AAAGTCGTTGCCGCATATTTTGTCGAATGGGGCGTTTATCCTAGAAACTTTCCTGTAGAT 62098 ||||| || | || || || || |||||||| || |||||||| || || || || ||| Sbjct 183021 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 182962 Query 62099 CGAGTGCCTACTCCTAATCTATCGCATGTTCTCTATGGATTTATTCCTATATGCGGCGGC 62158 || | |||| |||||||| | ||| | ||||| || ||||| || || |||||||| Sbjct 182961 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGT 182902 Query 62159 GACGGCATTAACGACAGTCTCAAGACCATAACCGGTAGTTTTGAAGCTCTTCAGCGGTCG 62218 |||||||| || || ||| | || || || ||||| |||| || |||||||| Sbjct 182901 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 182842 Query 62219 TGTTCGGGTCGAGACGACTTTAAAGTGTCGATTCATGACCCGTGGGCTGCCGTCCAGAAA 62278 ||| || || || ||||| ||||| || || || || || ||||| || | || ||| Sbjct 182841 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 182782 Query 62279 CCACAAAAACAAGTAACCGCTTGGAACGAACCATACAAAGGTAATTTTGGTCAATTGATG 62338 ||||||||| | | | | |||||||| || |||||||| || ||||| ||||| ||| Sbjct 182781 CCACAAAAAGGATTGTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAATG 182722 Query 62339 GCAGCCAAACTGGCGAATCCTCACATTAAAGTGT-TACCTTCGATAGGCGGCTGGACATT 62397 || |||| || ||| | ||| ||| | | || || || || || ||||| | Sbjct 182721 TCACTAAAACAAGCCCGCCCTGA-ATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCT 182663 Query 62398 ATCCGATCCGTTCTTTTATTTTCACGATGTGGCCAAACGCAAGATT------TTTGTCGA 62451 ||||||| ||||| | ||| || | |||| |||| ||||| | Sbjct 182662 TGCCGATCCTTTCTTCTTTTTA------GTTGACAAATCTAAGAGAACACGATTTGTGCA 182609 Query 62452 TTCCGTCATAGAATTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGATTGGGA 62511 || || | || ||| | | || |||||||| ||||||||||| || ||||||||||| Sbjct 182608 GTCAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGA 182549 Query 62512 GTTTCCCGGCGGGAAAGGCGCCAATCCCAACGTAGGCGACGTCGAACGCGATCGCGAAAC 62571 ||| || || || ||||| || || || || | || | ||| ||| | || Sbjct 182548 GTTCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTGATTG 182492 Query 62572 GTACACGATTCTGTTGAGAGATTTACGCGAAGCCCTCGACCGTCTCTCAATCGAAACGAA 62631 || | | || ||| ||| ||||| || |||||| |||||| | | ||| Sbjct 182491 TTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGACGAGCTCTCA---GCTAAGAA 182435 Query 62632 TCGAACG---TACGAATTGACTAGCGCGATCAGCGCCGGCGATGACAAAATTGCCGTAGT 62688 | | | | |||||||| ||| || || ||||| || || ||||| || || Sbjct 182434 TGGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGT 182375 Query 62689 CGATTACACTGAAGCGCAAAAATATTTGGATTATAtttttttAATGACATACGATTTCAA 62748 || || | || ||||| ||| ||||| ||||||| || |||| ||||| ||||| Sbjct 182374 AGACTATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAA 182315 Query 62749 AGGAGCTTGGTCGAATAGCGATTTGGGATATCAAACGACTCTGTACGCGCCTTCGTTTAA 62808 ||||| ||||| ||| | | | ||| |||||||| | |||||||||| ||| || Sbjct 182314 GGGAGCCTGGTCAAATGACACTCTTGGACATCAAACGCCATTGTACGCGCCAGCGTGGAA 182255 Query 62809 CCCTAAAGAGCATTATACGACCGATTTTGCCGT-TCGTGCTATGCTCAAGCAAAAAGTCG 62867 || || || ||| || | || || | || | || |||| ||| ||| | Sbjct 182254 TCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACT-TGCTGGCGCAGGGAGT-G 182197 Query 62868 AAAAC-AAAAAGATTATAGTCGGCGTGGCCATGTACGGTCGAGGTTGGACCGGCGTCGGT 62926 || | || |||||| |||| || || || ||||| ||||| |||||||| ||||| | Sbjct 182196 AATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCAT 182137 Query 62927 GACTTTGTCGACGAAAATAATCCATTTTCCGGCACGGCTAAGGGACCGATCAAAGGTACC 62986 || | | | || || | ||| || | |||| |||| ||||| ||||||| || Sbjct 182136 GA---TTACAAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACT 182080 Query 62987 TGGGAGGACGGAGTCGTCGATTATAGAGAGATT----TTTAATTCTTTTGTGGGTAAAGA 63042 ||| | |||||||| || || ||||| |||||| | || || | || ||| Sbjct 182079 TGGCAAGACGGAGTGGTTGACTATAGGGAGATTGCGAATGAAATCGCTCAAGG--CAAGT 182022 Query 63043 CGGCATTAATCGTTACGATTCCATCGCAAAAGCGGCATACGTCTTTAATAACGCGACCGG 63102 || || | |||||| |||| |||| | |||||||| | | || || Sbjct 182021 GGGAGTT--CCATTACGACAATGTCGCCCAAGCCCCTTACGTCTTCAGACCATCAACTGG 181964 Query 63103 CGATCTCATAACCTACGACAGTCCTCAGTCGGTTCTGGATAAAGCAAAATATGTTTTGGA 63162 ||||| ||||||| || | | || |||||| | || || | |||||||| | Sbjct 181963 AGATCTTGTAACCTATGATAATGCTAGATCGGTTATTGAAAAGGGTAAATATGTAAGAAA 181904 Query 63163 CTATAATCTGGGTGGTCTGTTCGCGTGGGAGATCGATGCTGACAACGGATTGCTTCTAAA 63222 | || || |||||||| || || ||||| | || ||||| ||||| || || || Sbjct 181903 TAACAAGCTAGGTGGTCTCTTTGCTTGGGAAGTGGACGCTGATAACGGTGACCTACTGAA 181844 Query 63223 CGCAATGAACAGCGGTCTCGG 63243 || ||||||| |||||||| Sbjct 181843 TGCCATGAACATGGGTCTCGG 181823 >seq3345 Length=207354 Score = 170 bits (188), Expect = 2e-37 Identities = 873/1370 (64%), Gaps = 33/1370 (2%) Strand=Plus/Minus Query 147114 ACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTTT 147173 || || || ||||| | |||||||| ||||| || | || |||||||| || |||||| Sbjct 113380 ACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCTGTTTTT 113321 Query 147174 AAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT-ATAGGTTGGATTGGC 147232 |||||| ||| ||||| | | ||||| || | ||| || |||| | || || || Sbjct 113320 AAACCCATTTTCCAAGCGTGGAAATGAATCGACG-TAAGTTTTCCATAGTTAGGTTTAGC 113262 Query 147233 CACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATGTC 147292 ||| | || | ||||| || || || || ||| ||| | || || ||||| | Sbjct 113261 AACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCCATCTG 113202 Query 147293 CAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAGCGCCTTGATATTGTGTGG 147352 | | ||| || ||| ||||| |||| ||| | | | | || | | || Sbjct 113201 TATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCTTTAGG 113142 Query 147353 AATTTCATCAATATTTTGTACAGATCCGTTGTTTT---TAATAATTTTTATCATGATATC 147409 ||||| ||||| | ||||| |||||| ||||| | |||||| ||| |||| || Sbjct 113141 AATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATATCTTC 113082 Query 147410 TGTCGA-ATATACGTTGGTGTCTACGAGTTTATCGACGAGATGCTGATTGACCACTTGAT 147468 | | | || | | ||| | | | || ||||| || || || || || Sbjct 113081 ATCCCACAAATCAGCCCGAGTCAAATCAGTCA--GA--AGATGATGGTTCACTACAGGAA 113026 Query 147469 ACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGT 147528 | || || || | ||||||| | ||| | ||| ||||| || || || || || Sbjct 113025 ATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGATTCAG 112966 Query 147529 TGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGC 147588 |||| || ||||| |||||||| | || |||||||| ||| ||||||| ||||||| Sbjct 112965 TGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGAGAATTGC 112906 Query 147589 GTAAGCCGTGCATAGCCATTTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATT 147648 | || || || | || || | | || || | |||||| |||||| || | | Sbjct 112905 GCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTGTAGGA- 112847 Query 147649 GGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAG 147708 ||| | | ||||| |||| |||| | | || ||||| || || || | || | Sbjct 112846 -GTTT-TGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATG 112789 Query 147709 AATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTTAGTGCACCATAATAAA 147768 ||||| || | || ||||| ||| ||| || |||||||||||||| Sbjct 112788 TGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAA 112729 Query 147769 TAGTTTCTGAAATCTTTTTATTTAAATCTCTAGCCTCTTGGCTGTCGTAGGGCATATCCA 147828 | ||||| | || | || ||| | | | | || | | || ||||| | || || Sbjct 112728 TTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGAAATTCTCA 112669 Query 147829 AAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCTGAAAT 147888 | | |||| ||| || | || |||| ||| ||||| || |||| ||||| | || Sbjct 112668 TCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATAT 112609 Query 147889 TCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGAGATTAT 147948 | || | || || || | ||||||||||| | || |||| ||| || | ||| | Sbjct 112608 TTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTT 112549 Query 147949 TGGTAACCA-CTCTA-GATACATTGTAGAGCGACTTAAAGTCGAAGCTTTTAAACTGTTT 148006 || || | || | ||| || || ||||| | || || ||| || Sbjct 112548 GAGTTACAATCTTTGTGATTTCTTTTAATTTT--TTAAAATTAAATCTATTA------TT 112497 Query 148007 ATTGGCAAAATTATTTACGGCAATCGAGGCCAAGTTACACACGGCCGTTTC-TCGATTGT 148065 | |||| | || | || || || || | ||| ||||| ||| ||| || || Sbjct 112496 TTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGA 112437 Query 148066 CGCTATATTGAACGATTTCGGCACACAGATTGCTGTTTCGAATCACTCCCTCG-tttttt 148124 | | ||||| || | || | || |||||||| | ||| | | || | |||||| Sbjct 112436 AG-TGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAAT-AGTGCCAAGATTTTTT 112379 Query 148125 tGATTATTTTTATTGTTAACGTGATCTTTAAACATCATGTATGGAGCTCCGGTCTCGACT 148184 |||||| | || ||||| ||| ||| ||| ||||||||| | || ||||| ||| Sbjct 112378 TGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCTACT 112319 Query 148185 TGAGTCTCAATAATTT--TTCTATGAAGATCTAAAGCCGAAATTTGTTTTTTAAACTTGC 148242 || | || |||||| ||| || | ||| ||| | ||||||| |||| Sbjct 112318 TGGGCTTCTATAATTGACTTCCATAAC--TCTTGAGCTCTGACTTGTTTTATAAATCGTT 112261 Query 148243 CTTCGGCCTCGTAATTTTCGTAAAGGTCCTCGAATTCTTGGCCATAGCAATCGTTTAAAC 148302 ||| | || || || | || || || || ||||| | ||| |||| || | | Sbjct 112260 TTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGC 112201 Query 148303 CGGGACACTCGTCGGGGCACATCAATGACCATT-TCCCTCCTGTCTTTACCCTCTTCATA 148361 | ||||| || | || ||||| | ||| | | |||| | | ||| || |||||| Sbjct 112200 CAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTT-TCTACTCTTTTCATA 112142 Query 148362 AACAGATCAGGTGTCCACATGGCAAAAAGAAGATCGCGAGCCTTCATATCCTCGGCACCC 148421 |||||||| ||| |||| | |||| ||| || || | ||| |||| || || |||| Sbjct 112141 AACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCC 112082 Query 148422 ATATTGCGCTTTAGATCCaaaaaagtaaaaaCGTCTGCGTGCCAAGGCTC 148471 | || ||||| |||||| || ||| | |||||| ||||||||||| Sbjct 112081 GTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTC 112032 >seq3424 Length=494560 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | |||||||| ||| | ||||| ||| | ||||| | ||| | ||| | Sbjct 290435 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 290494 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || || ||||||| || || ||||| || ||||| |||||| Sbjct 290495 GATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAA 290554 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 |||||||| |||| || ||| || ||||| ||||||| | || | | | |||||||| Sbjct 290555 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCG-CACATTATCAGACTATAA 290613 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || ||||||||||| | || || || || ||||||||||| || Sbjct 290614 TATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 290661 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||||| ||||| ||| | || ||| | ||| | || | Sbjct 289979 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACCTTGGAAGTGGAGGCTTCT 290038 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || ||||||| ||||| ||||| || ||||| |||||| Sbjct 290039 GACACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 290098 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| || ||| || ||||| ||||||| | | | |||||||| Sbjct 290099 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAAT 290158 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || || || |||||| | ||| | || || | || ||||| |||| Sbjct 290159 ATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGGAA 290207 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| |||||||| ||| | ||||| | ||| | ||| | Sbjct 288611 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 288670 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | || || ||||||| ||||| ||||| || ||||| |||||| Sbjct 288671 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAA 288730 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||||| |||| || ||| || ||| | ||||||| | | || |||||||| Sbjct 288731 CAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTCTCAGACTATAAT 288790 Query 26949 ATTCAAAAAGAATCTACT 26966 || || || ||||||||| Sbjct 288791 ATCCAGAAGGAATCTACT 288808 Score = 107 bits (118), Expect = 2e-18 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | |||||||| ||| | ||||| ||| | ||||| | ||| | || | Sbjct 289066 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTC 289125 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || || | || || ||| ||| ||||||||||| || ||||| || || Sbjct 289126 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 289185 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT-GATAGAAAC-GTCAGCGACTAT 26945 ||| || || |||| | || ||||| || |||||| || | || |||| || ||| Sbjct 289186 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCA--GATTAT 289243 Query 26946 AACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || |||||||| ||||||||| | || |||| ||| | ||||| || |||| Sbjct 289244 AATATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCGCCTTAGGGGTGGAA 289295 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | |||||||| ||| | ||||| ||| | ||||| | || | ||| | Sbjct 290206 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTC 290265 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || || | || || ||||||| || || ||||| || ||||| ||||| Sbjct 290266 TGATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCA 290325 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||||||||| |||| || ||| || ||||| ||||||| | | | |||||||| Sbjct 290326 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAA 290385 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || || || |||||| | ||| | || || | || ||||| || Sbjct 290386 TATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 290433 >seq4254 Length=614577 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 71670 AAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTC 71729 |||| || ||||| ||||||| | ||||| ||| || || ||||| || || | Sbjct 229798 AAACACACGATGACTTATGGAACTCAGCTCAAATACAACTTGTGAAAGAGGGCAAGATGC 229857 Query 71730 ACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGC 71789 | || | |||||||||||||||| ||| |||||| | || ||||| || | ||||| | Sbjct 229858 ATGGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTAGAATGGACCCAGTCGCCCGAAC 229917 Query 71790 AGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 |||| | ||| | ||||||| | || ||| |||||| | ||||| | ||||||| Sbjct 229918 AGGCTTTGAAGTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCTA 229977 Query 71850 ACGGTTATGTCGGT 71863 | |||||||| ||| Sbjct 229978 ATGGTTATGTTGGT 229991 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 66473 AAACACACGACAATATATGGAATAAAGCTCAAGAAGAT-TTGCGAGAAAACGGCAAAATA 66531 |||||||||| | ||||||| ||||||| | | ||| || || | ||||| || Sbjct 229798 AAACACACGATGACTTATGGAACTCAGCTCAAATACAACTTGTGA-AAGAGGGCAAGATG 229856 Query 66532 TATCCATTCATACGCGTATACTGGGCCAAAAAGATTTTGGAGTGGACGTCAACACCGGAA 66591 || ||| ||||| | |||||| ||| |||||||| || ||||| | || ||| Sbjct 229857 CATGGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTAGAATGGACCCAGTCGCCCGAA 229916 Query 66592 GAGGCTTTGAATCGTGCGATTTACTTGAATCAAAAGTATGCTGTCGACGGTTGCGATCCC 66651 |||||||||| ||| |||||||||||| | | || ||| ||||| | ||||| Sbjct 229917 CAGGCTTTGAAGTTTGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCT 229976 Query 66652 AGCGGTTATGTAGG 66665 | |||||||| || Sbjct 229977 AATGGTTATGTTGG 229990 >seq2787 Length=76071 Score = 104 bits (114), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||| | ||||||||| | || || | ||| | ||| | Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || ||| || || ||||||||||| || ||||| |||||| Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTATA 26946 ||| | || |||| | ||||| ||| | ||||||| | | | || ||| ||||| | Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTC--TGACTACA 40140 Query 26947 ACATTCAAAAAGAATCTACT 26966 |||| ||||||||||||||| Sbjct 40141 ACATCCAAAAAGAATCTACT 40160 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | ||||| |||||| | || || ||| | || || | ||| | ||| | Sbjct 39503 CAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACC 39562 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||| || || || | || ||| || ||| ||||| ||||| || ||||| || Sbjct 39563 TTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 39622 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||||||| | | |||| || || || ||| | ||||| | | | | ||||| Sbjct 39623 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 39682 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| |||||||||||||||||| | || |||| || | ||| | || |||| Sbjct 39683 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCGTCTTCGTGGTGGAA 39735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478636618046480