Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2167 84.2 6e-11 >seq2167 Length=747338 Score = 84.2 bits (92), Expect = 6e-11 Identities = 106/143 (74%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 65872 TTACGAATCGTTCCGTCATAATTGCACATAT-TATCTTCACTTGCCTTTACAAGACAACG 65930 ||||| | ||||| ||||||| |||| | || || | ||||||| | || ||| Sbjct 219220 TTACGGACAGTTCCATCATAATGTACCATAACTGACTCCA-TAGCCTTTATTAAACGACG 219278 Query 65931 CTGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGA 65990 ||| ||||||||| | | ||||||||||| |||||||||| |||||||||||| || Sbjct 219279 CTGAATGTAACCAGTTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCC 219338 Query 65991 CATTGCAGAAAAGAAAAACTCAG 66013 ||| || || ||||||||| Sbjct 219339 CATGGCGTGGAAATAAAACTCAG 219361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303281643069638