Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 179 3e-40
seq2787 120 2e-22
seq325 87.8 1e-12
>seq3463
Length=282612
Score = 179 bits (198), Expect = 3e-40
Identities = 768/1196 (64%), Gaps = 37/1196 (3%)
Strand=Plus/Plus
Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888
|| ||||||||||| || || || || || |||||||| | |||||| ||||| | |||
Sbjct 181832 ATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCAAAGAGACCA 181891
Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948
|||| |||||| | | |||||| ||| || | ||||| || | || |||||||
Sbjct 181892 CCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCATTATCATAG 181951
Query 95949 GAAATTAAATCGCCT-TTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCA-A 96006
| | | ||| || ||| | | | || | |||| | ||||| || || ||||| |
Sbjct 181952 GTTACAAGATCTCCAGTTGATGGTCTGAAGA-CGTAAGGGGCTTGGGCGACATTGTCGTA 182010
Query 96007 ATTTAACAATATATTTGTTT-----ATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061
|| ||| || || ||||| || || | | ||| ||||| || ||
Sbjct 182011 ATGGAACTCCCACTTGCCTTGAGCGATTTCATTCGCAATCTCCCTATAGTCAACCACTCC 182070
Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121
|||| |||||| || || || || || | || || | | || ||
Sbjct 182071 GTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTT 182130
Query 96122 GTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGC 96180
||||| ||| || |||||||| || ||||| ||||| || || || || | ||| ||
Sbjct 182131 GTAATCATGA-ACGCCAGTCCAACCACGACCATACATAGCAACACCTACTACAATCTTCT 182189
Query 96181 GCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGCT 96237
|| | ||| || || | ||||| ||| || | ||| | |||| |
Sbjct 182190 TAGGATTCACTCCCTGC---GCCAGCAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTT 182246
Query 96238 CGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAA---TCAATGTTTG 96294
| || || ||||| |||||||||| || ||||| | ||| | | ||| ||||
Sbjct 182247 CCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAGTGTCA---TTTG 182303
Query 96295 ACCACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAA 96354
|||| || || || || ||||| ||||| | || || | || | | ||||| ||
Sbjct 182304 ACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCT 182363
Query 96355 CGTCGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGT 96414
| | || | ||| || ||||| || || || || || ||| || || ||||
Sbjct 182364 TGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATTCGT 182423
Query 96415 ACGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAATAGA 96473
| | || || | | || || | |||||| | |||| | || ||||| || | | |
Sbjct 182424 ATTTCTTACCATTCTT-AGCTGAGAGCTCGTCGAGCATCTCACGTAATTCTTTCATCAAA 182482
Query 96474 ATGTTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTACC 96532
| || ||| | || ||| | | ||||| ||| ||||| || ||||| ||
Sbjct 182483 CTTACATAACAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACCTTTGCC 182538
Query 96533 GCCCGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTC 96592
|| || || ||||| ||||| || || || ||||| |||||||| | | ||| ||
Sbjct 182539 ACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAAACTC 182598
Query 96593 TCTGACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATA----GAACG 96648
| || || | ||||| || | | | | | || || ||| | ||| |
Sbjct 182599 CTTTACTGACTGCACAAAT---CGTGTTCTCTTAGATTTGT-CAACTAAAAAGAAGAAAG 182654
Query 96649 GGTCGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTT 96708
| |||| || ||||| || || ||||| || ||||| || | | || || |||
Sbjct 182655 GATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTT 182714
Query 96709 TGGCCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCT 96768
| | ||| || || ||||||||||||||||| ||||||||||| | ||||| || |
Sbjct 182715 TTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAATCCTT 182774
Query 96769 TTTGCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGC 96828
|||| |||||||||| ||| ||||| || ||||| || | ||||| || || |||||
Sbjct 182775 TTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGC 182834
Query 96829 CCTGGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATCGTTAA 96888
| || || || || || |||| ||||| || || ||| | ||| || |
Sbjct 182835 CGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGA 182894
Query 96889 GGCCGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATGTGACAAGTTGGGCAGCG 96948
|||||| ||||| ||||| || ||||| ||||| | |||||| | | || || | |
Sbjct 182895 TGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAG 182954
Query 96949 GCACTTTGTCCACCGGAAAGTTACGACCATACACGCCCCATTCCACAAAATACGCA 97004
| | ||||| || || || | | ||| || |||||||| || || || |||
Sbjct 182955 GTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCA 183010
>seq2787
Length=76071
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| ||||| || | |||||| | ||| || || |||||||| || ||||||||||| | |
Sbjct 40417 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 40358
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | || |||||||| || || ||| | ||||| ||||| || || ||
Sbjct 40357 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 40298
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| |||||||||||| || || ||| || || | | | ||| || ||| |||
Sbjct 40297 ATGCCCTCTTTGTCTTGGATTTTAGCT--TTTACATTTTCAATAGTATCAGAGGGTTCCA 40240
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||| ||||| ||||| || || ||||| ||||||||||||||
Sbjct 40239 CTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191
Score = 98.7 bits (108), Expect = 8e-16
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| || || |||| || ||| | ||| || || || |||||||| || || || || |
Sbjct 39961 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 39902
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| || | | || || | |||||| || ||| ||||||||| |||||| || ||
Sbjct 39901 AATGTACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGA 39842
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| ||||||||||| || ||||| |||||| | | | ||||||| |||||
Sbjct 39841 ATACCCTCTTTGTCTTGGATCTTTGC--CTTCACATTTTCGATAGTGTCGGACGGCTCTA 39784
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| | |||||||||||||| || || || || ||||| |||||||||
Sbjct 39783 CCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767
||| || || || | ||||| | ||||| || || || ||||| ||||| ||||| |
Sbjct 41558 CCCACCACGAAGACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGA 41499
Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827
|| || | | ||||| || ||||| || ||| | || || ||||||||||| ||
Sbjct 41498 CAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGG 41439
Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885
| |||||| || || || || || ||| || | | | ||||||| ||||||
Sbjct 41438 AATGCCCTCCTTATCTTGGATCTTAGC--CTTAACATTTTCGATAGTGTCGGATGGCTCC 41381
Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| |||||||| || || || || || || ||||| ||||||||
Sbjct 41380 ACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 41331
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|||||||| || | ||||||| || || || ||||| || || || |||||||| | |
Sbjct 41101 CCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGAC 41042
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | || |||| |||||| || || | ||||| || ||||| || |||
Sbjct 41041 AGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 40982
Query 16829 ACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886
| || || || || ||| | ||| || || | | | ||||| |||||
Sbjct 40981 ATTCCTTCCTTATCTTGAATCTTAGCT--TTAACATTTTCAATGGTGTCTGATGGCTCAA 40924
Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
||||| || || |||||||| || || ||||||||||| || ||||||
Sbjct 40923 CTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/214 (69%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
||||| | |||| || || || ||||| ||||||||||| | || || | ||
Sbjct 40174 AGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATCT 40115
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842
|| ||||| ||||||||| ||||||| || ||||| ||| ||| | ||| ||||||||
Sbjct 40114 TCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCT 40055
Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901
|| || ||| ||||| | | | ||||| | || ||| | || || |
Sbjct 40054 TGGATTTTAGCT--TTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTG 39997
Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||||| || || ||||| ||||| || |||||
Sbjct 39996 TTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963
>seq325
Length=86326
Score = 87.8 bits (96), Expect = 1e-12
Identities = 86/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 29344 GGCGGCGTGGGGCTGAATCTAACGGGCGGCAACCACCTCGTTTTGTTGGAGCCGCACTGG 29403
|||||||| ||||||||||| |||| | |||||| | || |||| |||||||||
Sbjct 15391 GGCGGCGTAGGGCTGAATCTGTGCGGCGCTAGCCACCTGCTGCTGCTGGACCCGCACTGG 15332
Query 29404 AACCCGCAGGTGGAGTTGCAGGCGCAGGGCCGCATCCACCGTTTGGGCCAG 29454
||||||||| ||||| |||||| |||| |||| | |||| |||| |||
Sbjct 15331 AACCCGCAGCTGGAGGAGCAGGCACAGGACCGCGTGTACCGCGTGGGGCAG 15281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405066726423910
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