Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq2265 187 2e-42
seq2787 145 5e-30
seq3933 140 2e-28
seq3932 140 2e-28
seq3927 140 2e-28
seq3917 140 2e-28
seq3914 140 2e-28
seq3913 140 2e-28
seq3888 140 2e-28
seq3886 140 2e-28
seq3879 140 2e-28
seq3877 140 2e-28
seq3854 140 2e-28
seq3826 140 2e-28
seq3813 140 2e-28
seq3102 140 2e-28
seq3079 140 2e-28
seq3064 140 2e-28
seq3015 140 2e-28
seq3026 132 3e-26
seq3424 127 1e-24
seq1305 87.8 1e-12
>seq2265
Length=480565
Score = 187 bits (206), Expect = 2e-42
Identities = 127/143 (89%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221
|||||| || ||||||| || | ||||||||||||||||||||||||||||| ||||||
Sbjct 393022 ATGGGGTCCGTGAACGTGAACAGGAATGTGGCGGACGCGTTCTACCGCTACAAGATGCCG 393081
Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281
||||||||||||||||||||||||||||| ||||| || || |||||||| |||||||||
Sbjct 393082 CGCATCTGCGCCAAGGTCGAGGGTAAGGGGAACGGCATCAAGACCGTCATCGTCAACATG 393141
Query 6282 CCTGAAGTCGCTAAGGCGCTCGG 6304
| || |||||||||||||| ||
Sbjct 393142 CTAGAGGTCGCTAAGGCGCTTGG 393164
Score = 143 bits (158), Expect = 2e-29
Identities = 130/164 (79%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497
||||||||||| || || || |||| || ||||| || || ||||| ||||| || |||
Sbjct 396222 TTTATTCGCAAATTCGTCCTCTGTCCCGAGTGCGACAATCCCGAGACGGAGCTGATAGTG 396281
Query 6498 TCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTG 6557
|| |||||||| ||||||||||| || |||||||| |||||||| ||||| ||| ||
Sbjct 396282 TCCACCAAGAGGAACACCATCTCGCAAGGCTGCAAGGCGTGCGGGTACCACGGCCCCTTG 396341
Query 6558 GATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601
|| || || ||||| || ||||||||||||||||| || ||
Sbjct 396342 GAATTCAACCATAAACTGAATACCTTCATACTGAAGAACCCGCC 396385
Score = 107 bits (118), Expect = 1e-18
Identities = 381/585 (65%), Gaps = 43/585 (7%)
Strand=Plus/Plus
Query 6811 ACCTGACTGAGAGTACCAAGTCTATGACGTTGAACGAAGACATGGaaaaaaaCCAAAAGC 6870
||||||| ||| | ||||| |||||| || ||| |||| || || ||| | ||||
Sbjct 400356 ACCTGACGGAGGGCGCCAAGAGCATGACGCTGTCCGAGGACAGCGAGAAGAACGAGAAGC 400415
Query 6871 AACGTTTGGACCTGTTCTATGTGTACCTCAAGCAGAAGCACACCTCCGGCGATGTCTCGG 6930
| || ||||| ||||||| || ||| |||||| || || | || | | |||
Sbjct 400416 AGCGCATGGACATGTTCTACTCGTTCCTGAAGCAGC-GCGCA-----GACGCGGGCGCGG 400469
Query 6931 AACACAAAGTCGCTGCGGATCTGTTACACGAGGCTGAACGGTTAAAAGTGAAATCAAAGG 6990
||| |||||| || || | |||||||| || | | ||| | || |
Sbjct 400470 T-CAC-----CGCTGCCGACGTGCTGAACGAGGCTACGCGCCTCGACGTGCGCGCCAACG 400523
Query 6991 CGCCGCTGGTGCTTTTTGAGGTGCTGGT-GCGTCCGGCCGCGCTGGCGTGCGATGTGCGC 7049
|||| || || || |||||||| || ||| ||| | |||| || ||| ||||||
Sbjct 400524 CGCCTCTCGTCGCCTTCGAGGTGCTAGTCGCG-CCGCGCACGCTCGCCGCCGACGTGCGC 400582
Query 7050 AAGTACCGCGCGCTGTTGCTGCGCTTTACGCAACATGACCCGCGCGCGCAACGCGCCGTT 7109
||||||| | || ||| | | | || ||||| || | |||||||
Sbjct 400583 CGCCACCGCGCCACCCTCCTCCGCCTCGCCCGCGCCGATCCGCGTGCACCCCGCGCCGCC 400642
Query 7110 CTCACTGCGCTTTGTGTGCTCGACACTGCG---------CTGCTGCCCAAAGTGGCCGGC 7160
|| |||||| || ||||| | | || ||||| ||||| || ||| |
Sbjct 400643 CTTCATGCGCTCACTGCGCTCGCCGCCGCCGAACCCGCTCTGCTCCCCAAGCTGCCCGCC 400702
Query 7161 GCGCTTAAACTGCTGTACGACCTAGACATAGTACAAGAGAAAACGATCATGGAGTGGTTC 7220
|| || || ||||| |||||||| ||||| || | ||| | || |||| ||| |
Sbjct 400703 GCCCTCAAGCTGCTCTACGACCTGGACATCGTGGACGAGCGCGCCGTCTTGGATTGGGCC 400762
Query 7221 CACAAGCCGTCGTGCAAG-ACTCTCAGCAAAGAAGTGATGGCTGACGTGCACCGCCGCGC 7279
|||||| || ||||| || | | ||| || ||| |||| ||||||| || || ||
Sbjct 400763 GCCAAGCCCTCACGCAAGTACGCGCC-CAAGGAGGTGGTGGCCGACGTGCTGCGGCGTGC 400821
Query 7280 GCAGCCCTTCCTGAACTGGCTGCAGCAAGC---CGAGGATGAT-------AGCA--GCGA 7327
|||||||||||| | ||||||||||| || |||||| || || | ||||
Sbjct 400822 GCAGCCCTTCCTAGAGTGGCTGCAGCAGGCTGACGAGGAGGACTCGGACGAGGATGGCGA 400881
Query 7328 CAG---CGCCGAGGA--AC-TGGAGATCGAGTACTCGGACCGCGC 7366
| | |||||| || || | |||||||||||| ||||||||
Sbjct 400882 CGGTGACGCCGACGACGACATCGAGATCGAGTACGACGACCGCGC 400926
Score = 89.7 bits (98), Expect = 3e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380
|| || ||||| ||||| || || || ||||| || |||||||| || ||| ||||||
Sbjct 395232 CCCACTAAATACTTCGGATGTGAGCTCGGCGCCCAAACGCAGTTCGACTTCAAGAACGAG 395291
Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424
||||||||||| ||||| ||| |||| |||||| |||||||
Sbjct 395292 CGCTTCATCGTCAACGGCAGCCATGACTCCGCCAAGTTGCAGGA 395335
>seq2787
Length=76071
Score = 145 bits (160), Expect = 5e-30
Identities = 174/235 (74%), Gaps = 1/235 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | | |||||| ||||| |||||||| || ||||||||||| || |
Sbjct 39737 CATT-CCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGT 39679
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||| | | ||| |||| || ||||| ||||| || || || | ||||||||||| |
Sbjct 39678 CAGAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTG 39619
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|| | |||||| ||||| |||||| || ||||| | | |||||| | ||
Sbjct 39618 GAGGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTT 39559
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||||||| || ||||| ||||||||||| | |||||||| || |||||||| ||
Sbjct 39558 CAACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504
Score = 120 bits (132), Expect = 2e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||||||||| ||||| | || || || | ||| || ||||| || ||||| ||||
Sbjct 40191 TACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 40132
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || |||||||| || || ||||| || || ||||||||||| | |
Sbjct 40131 ACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAG 40072
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||||||| ||||| |||||||| | | || || | |||||
Sbjct 40071 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAA 40012
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| ||||| ||||| || || | ||||| || || || |||||
Sbjct 40011 CTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963
Score = 118 bits (130), Expect = 7e-22
Identities = 166/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| | | ||| | ||| || || || || ||| || |||||||||||||
Sbjct 40877 CATT-CCACCACGGAGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAAT 40819
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||||||| || | || || ||||| ||||| ||||| || || |||||||| || |
Sbjct 40818 CAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTG 40759
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||||| ||| || || ||| ||||| || ||||||| || || || ||
Sbjct 40758 GGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTT 40699
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| | ||||| || || || ||||| ||||| || ||||| |||||
Sbjct 40698 CTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647
Score = 111 bits (122), Expect = 1e-19
Identities = 162/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
|||| |||| ||||| || || || || | |||| ||| || ||||||||||| ||||
Sbjct 41331 TACCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAG 41272
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | ||| | || || | || || || || || || || ||||||||||| | ||
Sbjct 41271 AAAGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGG 41212
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || |||||||| || || || ||||| | | ||| ||| |||||
Sbjct 41211 GAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAA 41152
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||||||||| |||||||| || |||| || || || || ||||||||
Sbjct 41151 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103
Score = 109 bits (120), Expect = 4e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162
||||| || ||||| || || |||||||||||||| |||||||| || ||| |
Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890
Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222
|| |||| ||||||||| ||||| || || | |||||||| | ||| | || ||||||
Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830
Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282
|| || ||| ||||||||| | || ||| || || || ||||| || ||
Sbjct 39829 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 39770
Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||| || || | || || || || ||||||||
Sbjct 39769 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735
>seq3933
Length=1287
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 353 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 294
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 293 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 259
>seq3932
Length=1132
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 610 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 551
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 550 GGTAATATTTAGCCTTA 534
>seq3927
Length=1014
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 220 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 279
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 280 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 314
>seq3917
Length=1010
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 345 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 404
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 405 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 439
>seq3914
Length=1282
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 573
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 574 GGTAATATTTAGCCTTA 590
>seq3913
Length=1098
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 963 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 1022
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1023 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1057
>seq3888
Length=1183
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 905 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 964
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 965 GGTAATATTTAGCCTTA 981
>seq3886
Length=1119
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 195 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 136
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 135 GGTAATATTTAGCCTTA 119
>seq3879
Length=1240
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 845 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 786
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 785 GGTAATATTTAGCCTTA 769
>seq3877
Length=1357
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 321 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 380
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 381 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 415
>seq3854
Length=1202
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 583 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 524
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 523 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 489
>seq3826
Length=1220
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 352 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 411
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 412 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 446
>seq3813
Length=1215
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 638 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 579
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 578 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 544
>seq3102
Length=1067
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 684 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 625
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 624 GGTAATATTTAGCCTTA 608
>seq3079
Length=1116
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1029 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 970
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 969 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 935
>seq3064
Length=1270
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 486 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 427
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 426 GGTAATATTTAGCCTTA 410
>seq3015
Length=1098
Score = 140 bits (154), Expect = 2e-28
Identities = 77/77 (100%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 384 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 443
Query 20007 GGTAATATTTAGCCTTA 20023
|||||||||||||||||
Sbjct 444 GGTAATATTTAGCCTTA 460
>seq3026
Length=1143
Score = 132 bits (146), Expect = 3e-26
Identities = 84/91 (92%), Gaps = 5/91 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1053 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGCGGGAATCTCGT 1112
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATG 25987
|||||| ||||||||||||||||||||||||
Sbjct 1113 TAATCCATTCATGCGCGTCACTAATTAGATG 1143
>seq3424
Length=494560
Score = 127 bits (140), Expect = 1e-24
Identities = 168/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||| | |||||| || ||||| | ||| |||||| || ||||| || |
Sbjct 290209 CATT-CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGT 290151
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| ||||| ||| | || || | ||| |||||||| || || || | ||||||||| |
Sbjct 290150 CCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTG 290091
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|| | |||||| ||||| ||| ||| ||| ||||| | | || || | |
Sbjct 290090 GAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCT 290031
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| || ||||||||||| || ||||| |||||||| || || |||||
Sbjct 290030 CCACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 122 bits (134), Expect = 6e-23
Identities = 167/232 (72%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| ||||| || | |||| |||||| || | ||| |||||||||||||| ||||
Sbjct 289297 CATT-CCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAAT 289239
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
| |||| |||| | || || | |||||||| ||||| || || | ||||| || |
Sbjct 289238 CTGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAG 289179
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
|| | |||||||||||| ||||||| ||| ||||| | | ||||| | |
Sbjct 289178 GAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCT 289119
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| ||||| |||||||| || |||| || || || ||||| |||||
Sbjct 289118 CCACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067
Score = 113 bits (124), Expect = 3e-20
Identities = 165/232 (71%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||||| |||| |||| ||| | ||| ||||| ||||||||||| |
Sbjct 289753 CATT-CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGT 289695
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||| | ||| | || || | || ||||| ||||| || || | ||| ||||| |
Sbjct 289694 CAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 289635
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | ||| ||||| ||| |||||| ||| ||||| | | ||||| | ||
Sbjct 289634 GGGGAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTT 289575
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| ||||| ||||| || || |||| || || || ||||| |||||
Sbjct 289574 CCACTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289523
Score = 98.7 bits (108), Expect = 7e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
|||||||||| ||| | || ||||| | ||| || || ||||||||||| || ||
Sbjct 289977 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGAT 289918
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| |||| | || || | ||| ||||| ||||| || || | |||||| || | ||
Sbjct 289917 AGTGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 289858
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| |||||| || || |||||| ||| ||||| | || || || ||||||
Sbjct 289857 ATGCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACT 289798
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| | ||| ||||| || || |||| || ||||| ||||| |||||
Sbjct 289797 TCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCACAAATATTTGCAT 289751
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/232 (69%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||||| |||| |||| || | ||| ||||| ||||||||||| |
Sbjct 289525 CATT-CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGT 289467
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||| | ||| | || || | || ||||| ||||| || || | ||| ||||| |
Sbjct 289466 CAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 289407
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | || ||||| ||| |||||| ||| ||||| | | ||||| | ||
Sbjct 289406 GGGGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTT 289347
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
| ||||| || || ||||| || || |||| || || || || || |||||
Sbjct 289346 CCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 289295
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/232 (68%), Gaps = 1/232 (0%)
Strand=Plus/Minus
Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145
|||| |||||||||| || | || | || | ||| || || ||||| |||||||
Sbjct 289069 CATT-CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAAT 289011
Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205
|||| | ||| | || || | || ||||| ||||| || || | ||| ||||| |
Sbjct 289010 CAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 288951
Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265
||| | || ||||| ||| |||||| || ||||| | | ||||| | |
Sbjct 288950 GGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCT 288891
Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
||||||| || || ||||| || || |||| || || ||||| || |||||
Sbjct 288890 CAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839
>seq1305
Length=286731
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186
||||||||||| ||||| |||||||| |||| | || |||| |||||| || |||||
Sbjct 24794 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 24853
Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246
|| | ||||| || || | || | ||||| || || ||||| || |||||
Sbjct 24854 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 24913
Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306
| | |||||| || || || | ||||| ||||||||||| | ||| || |||
Sbjct 24914 TCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 24973
Query 38307 AATATCTGCAT 38317
|| || |||||
Sbjct 24974 AAAATTTGCAT 24984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334929609933779
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |