Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3463 244 9e-60 seq3424 167 2e-36 seq2787 158 1e-33 seq1305 129 5e-25 seq4254 96.9 3e-15 >seq3463 Length=282612 Score = 244 bits (270), Expect = 9e-60 Identities = 725/1101 (66%), Gaps = 34/1101 (3%) Strand=Plus/Plus Query 57178 ATTTCGCTTGCAATTTGCTTGTAATCAACCACGCCTTCCTCCCACGTGCCGTGCACAGGC 57237 ||||| | ||||| | | | || |||||||| || || | ||| || || | ||||| Sbjct 182036 ATTTCATTCGCAATCTCCCTATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGT 182095 Query 57238 CCACTTCCTTTACCCGTGAACGGATTGTTGTCCGTGTAGTCGTGCACACCCGTCCATCCT 57297 ||| | | || || ||||| ||| ||||||| |||| || || || || ||||| || Sbjct 182096 CCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCA 182155 Query 57298 CGACCGTACATGGCCACGCCAACCACTATTTTGTCAGCGGACACGTTCTGCGCTAACAAA 57357 ||||| ||||| || || || || || || || | || ||| |||||| | ||| Sbjct 182156 CGACCATACATAGCAACACCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAG 182215 Query 57358 GTGCGTACAGCATTGTCTGTGGTATATGGTTCGCTAGGGTTCCACAGAGGCGCATA-AAT 57416 ||| | ||| | || || | ||| | || |||||| ||||| || ||| Sbjct 182216 TATTTTACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAAT 182275 Query 57417 GTTGGTTTGATAGCCCAAATTTGTG-TTACTCCAGGCACCTTTAAAATCGTACGACATTA 57475 | | |||||| | |||| ||| || |||||| || || || ||||| ||| | Sbjct 182276 GGCG-TTTGAT-GTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCA 182333 Query 57476 AGAATATGCTGTCGAGATATTTTTGCGCATGATTGTAATCGACAAGTTCGATTTTATCAT 57535 |||| || || | ||| ||||| || | || || |||| || ||||||||| Sbjct 182334 AGAAAATATGATCCATATAATTTTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCC 182393 Query 57536 TACCGGCGCCGATGGCTGTTGTGAGCAATAGT--TTACGATCAGTTTCCAGTTCCAACTC 57593 || |||| || || | || | | | || || | || | | | | ||| Sbjct 182394 ATCCAGCGCTAATAGCAGAAGTTA--ATTCGTATTTCTTACCATTCTTAGCTGAGAGCTC 182451 Query 57594 GTCCAACATTAATCTCAAATCTTTCAATAGCCGCACGTATGTTTCTCCGTCGCGACCAGG 57653 ||| | ||| | || ||||||| | | || || || || || | || Sbjct 182452 GTCGAGCATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATCTT---CTGG 182508 Query 57654 GTCGCCCAACAAAGGATTAGCACCATTACCACCAGGAAATTCCCAATCAATGTCGACTCC 57713 | || | ||| |||||||| || |||||||| || |||||||| || || || || Sbjct 182509 GCTACCGAGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACC 182568 Query 57714 ATCAAAAAATTTCCACACTTTGATGTAG-TCGCGCACCGATTGCACAAAA-GTGTTGCGA 57771 ||| || |||||||| || || | | || || || |||||||| ||||| | Sbjct 182569 ATCGAAGAATTTCCATG-TTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTT-CTC 182626 Query 57772 ATAGTGTCGTCGTGCATGAAAAAGAAGGGATCCGATAAGGTCCAACCACCAATGGATGGC 57831 ||| | ||| | || ||||| ||||| | | ||||| |||||||| || || Sbjct 182627 TTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGG- 182685 Query 57832 AATACTTTTAGATGC-GGATATGCTTTTTTGACCGCCATCAGTTGACCAAAATTACCTTT 57890 || | | || || | || |||| ||| | | ||| | ||| ||||| || ||||| Sbjct 182686 AAGAATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTT 182745 Query 57891 GTAAGGTTCGTTCCAAGCCGATACTCCTTGTTGAGGCTTTTGTAGCGCCGCCCAAGGATC 57950 |||||| |||||||| | || | ||||| ||| || ||||||| || ||||| ||||| Sbjct 182746 GTAAGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATC 182805 Query 57951 GTGTATCGTTACTTTGAAATCTTCTCGGCCTGCACACGAACGTTGCAACGCTTCAAAACT 58010 ||| || | |||||||| || || ||||| ||| || || || | |||| ||||| Sbjct 182806 GTGGATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACT 182865 Query 58011 ACCTGTAATCGTCTTTAGACTGTCGTTGATGCCATCGCCTCCGCAAATAGGCACGAAACC 58070 ||| ||| |||| ||| || |||||||| || || |||||||| || | || || Sbjct 182866 GCCTTCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCC 182925 Query 58071 GTACAACAAATGAGTCAAATTGGGTACGGGTACTTTATCAACTGGATATTTACGACCGTA 58130 ||| | ||||||||| | ||| |||| |||| ||| || || |||| | | || Sbjct 182926 GTAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATA 182985 Query 58131 CACACTCCACTCCACGAAATAAGCTCCCACGATCAATTTTTGGTCTGGTGACAAAGGTT- 58189 |||| ||| || ||||| || || |||| ||| |||| || | ||| Sbjct 182986 GACACCCCATTCTACGAAGTAGGCACCCA----CAACTTTT---------CCAGATGTTT 183032 Query 58190 -CATGA--GGTTTATTGTTTTCTTGCCAAGTATAGTGCAGAGGTTGTAGGTGAGCTCCGT 58246 | ||| || ||||| |||||| | | ||||| | |||||| ||| ||| ||| | Sbjct 183033 GCTTGAACGGCTTATTTTTTTCTCCCAATGTATATTCCAGAGGAGGTAAATGACTTCCAT 183092 Query 58247 CAGTGTCGGCAACGACAATTT 58267 | || ||||| |||||||||| Sbjct 183093 CGGTATCGGCCACGACAATTT 183113 >seq3424 Length=494560 Score = 167 bits (184), Expect = 2e-36 Identities = 177/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||||||||| |||| || ||| | |||||| | ||||||||| | || Sbjct 289066 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTC 289125 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || ||||||| ||| ||||||||||| ||||| ||||||| Sbjct 289126 TGATACAATAGAAAATGTTAAGGCAAAAATTCA-AGACAAAGAAGGCATTCCTCCTGACC 289184 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||| || |||||||||| || ||||| | ||||||| || || || ||||| | Sbjct 289185 AACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATA 289244 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 |||||||||| ||||| || | || || ||||| | || || || |||| Sbjct 289245 ATATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCGCCTTAGGGGTGGAA 289295 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| ||||| |||| || || | |||||| | ||||| ||| | || Sbjct 289750 AATGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 289809 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||| ||||| | || || |||| ||| || || ||||| ||||| || |||| Sbjct 289810 TGACACAATCGAAAATGTTAAGGCCAAAATTCA-AGATAAGGAAGGCATTCCTCCAGACC 289868 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| || |||||||||| || || ||| | || |||| || || | || |||| Sbjct 289869 AACAAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTATCAGACTACA 289928 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||| |||||||| || |||||||||| || | || ||||| || Sbjct 289929 ATATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 289977 Score = 116 bits (128), Expect = 3e-21 Identities = 166/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||||||||| |||| || || | |||||| | |||||||| | || Sbjct 289522 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 289581 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || || |||| ||| || ||||| || ||||| || || | Sbjct 289582 TGATACAATTGAAAATGTTAAGGCGAAAATTCA-GGATAAAGAGGGCATTCCCCCAGATC 289640 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | |||||||||| || || || | ||||||| ||||| | || |||| Sbjct 289641 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 289700 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || ||||| || | ||| | || || |||| ||||| |||| Sbjct 289701 ATATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGGAA 289751 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | ||| Sbjct 290435 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 290494 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || || | || ||||| | ||| || || ||||| ||||| || || || Sbjct 290495 GATACAATAGAAAATGTTAAGGCAAAGATTCA-AGATAAGGAAGGCATTCCTCCAGATCA 290553 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| | | ||||| ||||| || ||| | ||||||| ||||| | || || || Sbjct 290554 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTATCAGACTATAA 290613 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || |||||||| || || || | || || || || ||||| || Sbjct 290614 TATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 290661 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || || | ||||| | |||||||| | || Sbjct 289294 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 289353 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || || |||| ||| || ||||| || ||||| || || | Sbjct 289354 TGATACAATTGAAAATGTTAAGGCGAAAATTCA-GGATAAAGAGGGTATTCCCCCAGATC 289412 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | || | |||||||||| || || || | ||||||| ||||| | || |||| Sbjct 289413 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 289472 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 ||||||| || ||||| || | || | || || |||| ||||| |||| Sbjct 289473 ATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGGAA 289523 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||||||||| |||| || ||| | ||||| | || ||||| | || Sbjct 290206 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTC 290265 Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||| || || || | || ||||| | ||| || || ||||| ||||| || || | Sbjct 290266 TGATACAATAGAAAATGTTAAGGCAAAGATTCA-AGATAAGGAAGGCATTCCTCCAGATC 290324 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | | ||||| ||||| || ||| | ||||||| ||||| || || || | Sbjct 290325 AACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATA 290384 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||| || || || || || | |||||||| | | |||||||| || Sbjct 290385 ATATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 290433 >seq2787 Length=76071 Score = 158 bits (174), Expect = 1e-33 Identities = 161/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| |||||| | || || ||| ||||||| | || || ||| |||| Sbjct 39734 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 39793 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| ||| ||| |||||||| || ||||| || || || Sbjct 39794 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 39853 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||| || |||||||||| || |||||| ||||||||| || || | ||||| || Sbjct 39854 ACAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAA 39913 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||||| ||||| || ||||||||||| Sbjct 39914 TATTCAAAAGGAATCTACCCTACATTTAGT 39943 Score = 141 bits (156), Expect = 8e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| || || ||||| || || |||| || | ||||| || | ||| Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| | || |||| |||| || || || || || || || || ||| Sbjct 40707 GACACAATCGAG--AATGTCAAAGCTAAAATACAG-GATAAGGAGGGCATCCCCCCAGAC 40763 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | |||||||| || || ||||| ||||||| ||||||| || |||||| Sbjct 40764 CAACAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTAC 40823 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| ||||| || || || || |||||||| Sbjct 40824 AATATTCAGAAAGAGTCAACCCTGCACTTAGTGCT 40858 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || ||| | || || | ||||| || | ||| Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || |||| |||||| ||||||||||| ||||| || || ||| Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||||||||| ||||| ||||||||||||| ||| || || || ||||| Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||| || | || ||||| || | ||||||| || Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 40189 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||| | || || || ||||||| | || |||||| | || Sbjct 41331 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 41390 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| || || || || ||||| || |||||| Sbjct 41391 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 41450 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| || ||||| ||||| |||| |||||| || || || || Sbjct 41451 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 41510 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || ||||||||||| || | |||||||| || Sbjct 41511 ATCCAAAAAGAATCTACTTTGCATTTAGTACT 41542 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||||||||| ||||| | || || || | || || | || |||||| | ||| Sbjct 40419 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 40478 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || || || | ||| || ||||| || ||||| || || || Sbjct 40479 GACACCATTGAAAATGTAAAGGCTAAGATTCA-AGATAAAGAGGGTATTCCCCCAGATCA 40537 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || |||| ||||| ||||| || ||||||||| |||||| || || ||||| Sbjct 40538 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 40597 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || |||||||| || || || |||||||| || Sbjct 40598 CATCCAAAAAGAGTCTACCCTTCATTTAGTACT 40630 Score = 109 bits (120), Expect = 5e-19 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| |||| || ||| | |||||| | ||||| || | || Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| || | || |||| || | || |||||||| || ||||| || || Sbjct 41163 GACACTATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAGGGTATTCCCCCAGAT 41219 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | ||||| || ||||| || | || |||| || ||| | || ||| Sbjct 41220 CAACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTAC 41279 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||||| ||||| ||||| | || ||||| || | || ||||||| Sbjct 41280 AATATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGG 41329 Score = 105 bits (116), Expect = 6e-18 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || | || |||||| |||| || | ||||| || | || Sbjct 39506 AATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 39565 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| || | || |||| |||| ||| ||||| ||||| ||||| || || Sbjct 39566 CGATACTATTGAA--AATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 39622 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | ||||| || || || ||||| ||||| | |||||| | || || Sbjct 39623 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 39682 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||||||||||||| || || || || || Sbjct 39683 TAATATTCAAAAAGAATCTACTCTTCACTTGGT 39715 Score = 102 bits (112), Expect = 7e-17 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||||||||| || || | || || ||| | || || | ||||| ||| | || Sbjct 40874 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 40933 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||||| || || | || |||| || | ||| || || ||||| ||||| || || Sbjct 40934 AGACACCATTGA--AAATGTTAAAGCTAAGATTCA-AGATAAGGAAGGAATTCCTCCAGA 40990 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || |||| || || || |||||| | ||||||| ||||| || || || Sbjct 40991 TCAACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTA 41050 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| || ||||| || || || || || || || | || ||||||| Sbjct 41051 CAATATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 41101 >seq1305 Length=286731 Score = 129 bits (142), Expect = 5e-25 Identities = 175/241 (73%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 ||||||||||| || || ||||| | || |||||| |||| || |||| |||||| | Sbjct 24987 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 24928 Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112 || || ||||| || | || |||| |||||| || || ||||| |||||||| Sbjct 24927 TCCGATACTAT--AGAAAATGTAAAAGC-TAAAATCCAAGATAAGGAAGGTATTCCACCA 24871 Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172 ||||| || || | || ||||| || |||||| ||||||||| || || || || Sbjct 24870 GACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGAC 24811 Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232 ||||| |||||||| |||||||| | ||| | ||||| | || | ||||| || ||| Sbjct 24810 TACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTAT 24751 Query 25233 T 25233 | Sbjct 24750 T 24750 >seq4254 Length=614577 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149 ||| |||||| |||||||| | || || || ||||||||||| || | | || || Sbjct 229991 ACCAACATAACCATTAGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 229932 Query 51150 ATAACCCAATGCCATGTCTGCACTAG-GCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208 | | ||| ||| ||| | | | | |||||||| | ||| |||||| |||||||| Sbjct 229931 AAACTTCAAAGCC-TGTTCGGGCGACTGGGTCCATTCTAAAATCTTCTTGCACCAGTACA 229873 Query 51209 TGCGCATGTAACCGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACA 51268 |||| | | |||| |||||||||||||| ||| || |||||| |||||||| | Sbjct 229872 TGCGTAGGAAACCATGCATCTTGCCCTCTTTCACAAGTTGTATTTGAGCTGAGTTCCATA 229813 Query 51269 ATTCGTCGTGAGTTT 51283 | || ||||| |||| Sbjct 229812 AGTCATCGTGTGTTT 229798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433305243373835