Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 244 9e-60
seq3424 167 2e-36
seq2787 158 1e-33
seq1305 129 5e-25
seq4254 96.9 3e-15
>seq3463
Length=282612
Score = 244 bits (270), Expect = 9e-60
Identities = 725/1101 (66%), Gaps = 34/1101 (3%)
Strand=Plus/Plus
Query 57178 ATTTCGCTTGCAATTTGCTTGTAATCAACCACGCCTTCCTCCCACGTGCCGTGCACAGGC 57237
||||| | ||||| | | | || |||||||| || || | ||| || || | |||||
Sbjct 182036 ATTTCATTCGCAATCTCCCTATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGT 182095
Query 57238 CCACTTCCTTTACCCGTGAACGGATTGTTGTCCGTGTAGTCGTGCACACCCGTCCATCCT 57297
||| | | || || ||||| ||| ||||||| |||| || || || || ||||| ||
Sbjct 182096 CCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCA 182155
Query 57298 CGACCGTACATGGCCACGCCAACCACTATTTTGTCAGCGGACACGTTCTGCGCTAACAAA 57357
||||| ||||| || || || || || || || | || ||| |||||| | |||
Sbjct 182156 CGACCATACATAGCAACACCTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAG 182215
Query 57358 GTGCGTACAGCATTGTCTGTGGTATATGGTTCGCTAGGGTTCCACAGAGGCGCATA-AAT 57416
||| | ||| | || || | ||| | || |||||| ||||| || |||
Sbjct 182216 TATTTTACTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAAT 182275
Query 57417 GTTGGTTTGATAGCCCAAATTTGTG-TTACTCCAGGCACCTTTAAAATCGTACGACATTA 57475
| | |||||| | |||| ||| || |||||| || || || ||||| ||| |
Sbjct 182276 GGCG-TTTGAT-GTCCAAGAGTGTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCA 182333
Query 57476 AGAATATGCTGTCGAGATATTTTTGCGCATGATTGTAATCGACAAGTTCGATTTTATCAT 57535
|||| || || | ||| ||||| || | || || |||| || |||||||||
Sbjct 182334 AGAAAATATGATCCATATAATTTTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCC 182393
Query 57536 TACCGGCGCCGATGGCTGTTGTGAGCAATAGT--TTACGATCAGTTTCCAGTTCCAACTC 57593
|| |||| || || | || | | | || || | || | | | | |||
Sbjct 182394 ATCCAGCGCTAATAGCAGAAGTTA--ATTCGTATTTCTTACCATTCTTAGCTGAGAGCTC 182451
Query 57594 GTCCAACATTAATCTCAAATCTTTCAATAGCCGCACGTATGTTTCTCCGTCGCGACCAGG 57653
||| | ||| | || ||||||| | | || || || || || | ||
Sbjct 182452 GTCGAGCATCTCACGTAATTCTTTCATCAAACTTACATAACAATCACCATCTT---CTGG 182508
Query 57654 GTCGCCCAACAAAGGATTAGCACCATTACCACCAGGAAATTCCCAATCAATGTCGACTCC 57713
| || | ||| |||||||| || |||||||| || |||||||| || || || ||
Sbjct 182509 GCTACCGAGGTCAGGGTTAGCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACC 182568
Query 57714 ATCAAAAAATTTCCACACTTTGATGTAG-TCGCGCACCGATTGCACAAAA-GTGTTGCGA 57771
||| || |||||||| || || | | || || || |||||||| ||||| |
Sbjct 182569 ATCGAAGAATTTCCATG-TTAGAAGAAACTCCTTTACTGACTGCACAAATCGTGTT-CTC 182626
Query 57772 ATAGTGTCGTCGTGCATGAAAAAGAAGGGATCCGATAAGGTCCAACCACCAATGGATGGC 57831
||| | ||| | || ||||| ||||| | | ||||| |||||||| || ||
Sbjct 182627 TTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGG- 182685
Query 57832 AATACTTTTAGATGC-GGATATGCTTTTTTGACCGCCATCAGTTGACCAAAATTACCTTT 57890
|| | | || || | || |||| ||| | | ||| | ||| ||||| || |||||
Sbjct 182686 AAGAATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTT 182745
Query 57891 GTAAGGTTCGTTCCAAGCCGATACTCCTTGTTGAGGCTTTTGTAGCGCCGCCCAAGGATC 57950
|||||| |||||||| | || | ||||| ||| || ||||||| || ||||| |||||
Sbjct 182746 GTAAGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATC 182805
Query 57951 GTGTATCGTTACTTTGAAATCTTCTCGGCCTGCACACGAACGTTGCAACGCTTCAAAACT 58010
||| || | |||||||| || || ||||| ||| || || || | |||| |||||
Sbjct 182806 GTGGATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACT 182865
Query 58011 ACCTGTAATCGTCTTTAGACTGTCGTTGATGCCATCGCCTCCGCAAATAGGCACGAAACC 58070
||| ||| |||| ||| || |||||||| || || |||||||| || | || ||
Sbjct 182866 GCCTTCGATCTCTTTTAAACTATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCC 182925
Query 58071 GTACAACAAATGAGTCAAATTGGGTACGGGTACTTTATCAACTGGATATTTACGACCGTA 58130
||| | ||||||||| | ||| |||| |||| ||| || || |||| | | ||
Sbjct 182926 GTAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATA 182985
Query 58131 CACACTCCACTCCACGAAATAAGCTCCCACGATCAATTTTTGGTCTGGTGACAAAGGTT- 58189
|||| ||| || ||||| || || |||| ||| |||| || | |||
Sbjct 182986 GACACCCCATTCTACGAAGTAGGCACCCA----CAACTTTT---------CCAGATGTTT 183032
Query 58190 -CATGA--GGTTTATTGTTTTCTTGCCAAGTATAGTGCAGAGGTTGTAGGTGAGCTCCGT 58246
| ||| || ||||| |||||| | | ||||| | |||||| ||| ||| ||| |
Sbjct 183033 GCTTGAACGGCTTATTTTTTTCTCCCAATGTATATTCCAGAGGAGGTAAATGACTTCCAT 183092
Query 58247 CAGTGTCGGCAACGACAATTT 58267
| || ||||| ||||||||||
Sbjct 183093 CGGTATCGGCCACGACAATTT 183113
>seq3424
Length=494560
Score = 167 bits (184), Expect = 2e-36
Identities = 177/231 (77%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||||||||| |||| || ||| | |||||| | ||||||||| | ||
Sbjct 289066 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTC 289125
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | || ||||||| ||| ||||||||||| ||||| |||||||
Sbjct 289126 TGATACAATAGAAAATGTTAAGGCAAAAATTCA-AGACAAAGAAGGCATTCCTCCTGACC 289184
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
||||| || |||||||||| || ||||| | ||||||| || || || ||||| |
Sbjct 289185 AACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATA 289244
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||||||| ||||| || | || || ||||| | || || || ||||
Sbjct 289245 ATATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCGCCTTAGGGGTGGAA 289295
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| ||||| |||| || || | |||||| | ||||| ||| | ||
Sbjct 289750 AATGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 289809
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| ||||| | || || |||| ||| || || ||||| ||||| || ||||
Sbjct 289810 TGACACAATCGAAAATGTTAAGGCCAAAATTCA-AGATAAGGAAGGCATTCCTCCAGACC 289868
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || |||||||||| || || ||| | || |||| || || | || ||||
Sbjct 289869 AACAAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTATCAGACTACA 289928
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||||||| |||||||| || |||||||||| || | || ||||| ||
Sbjct 289929 ATATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 289977
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||||||||| |||| || || | |||||| | |||||||| | ||
Sbjct 289522 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 289581
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | || || |||| ||| || ||||| || ||||| || || |
Sbjct 289582 TGATACAATTGAAAATGTTAAGGCGAAAATTCA-GGATAAAGAGGGCATTCCCCCAGATC 289640
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | |||||||||| || || || | ||||||| ||||| | || ||||
Sbjct 289641 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 289700
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||| || ||||| || | ||| | || || |||| ||||| ||||
Sbjct 289701 ATATTCAGAAGGAATCTACTTTGCATCTGGTACTGCGGCTGAGAGGTGGAA 289751
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||||||||| |||| || ||| | ||||| | |||||||| | |||
Sbjct 290435 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 290494
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
|| || || || | || ||||| | ||| || || ||||| ||||| || || ||
Sbjct 290495 GATACAATAGAAAATGTTAAGGCAAAGATTCA-AGATAAGGAAGGCATTCCTCCAGATCA 290553
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| | | ||||| ||||| || ||| | ||||||| ||||| | || || ||
Sbjct 290554 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTATCAGACTATAA 290613
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
||| || |||||||| || || || | || || || || ||||| ||
Sbjct 290614 TATCCAGAAAGAATCTACCCTTCACCTTGTTCTCAGACTTAGAGGTGG 290661
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || || | ||||| | |||||||| | ||
Sbjct 289294 AATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTC 289353
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | || || |||| ||| || ||||| || ||||| || || |
Sbjct 289354 TGATACAATTGAAAATGTTAAGGCGAAAATTCA-GGATAAAGAGGGTATTCCCCCAGATC 289412
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | |||||||||| || || || | ||||||| ||||| | || ||||
Sbjct 289413 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACA 289472
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||||| || ||||| || | || | || || |||| ||||| ||||
Sbjct 289473 ATATTCAGAAGGAATCAACTTTGCACCTGGTACTGCGGCTGAGAGGTGGAA 289523
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||| ||||||||||| |||| || ||| | ||||| | || ||||| | ||
Sbjct 290206 AATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTC 290265
Query 25058 TGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | || ||||| | ||| || || ||||| ||||| || || |
Sbjct 290266 TGATACAATAGAAAATGTTAAGGCAAAGATTCA-AGATAAGGAAGGCATTCCTCCAGATC 290324
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | ||||| ||||| || ||| | ||||||| ||||| || || || |
Sbjct 290325 AACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATA 290384
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||| || || || || || | |||||||| | | |||||||| ||
Sbjct 290385 ATATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 290433
>seq2787
Length=76071
Score = 158 bits (174), Expect = 1e-33
Identities = 161/210 (77%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| |||||| | || || ||| ||||||| | || || ||| ||||
Sbjct 39734 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 39793
Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| ||| ||| |||||||| || ||||| || || ||
Sbjct 39794 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 39853
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || |||||||||| || |||||| ||||||||| || || | ||||| ||
Sbjct 39854 ACAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAA 39913
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||| ||||| || |||||||||||
Sbjct 39914 TATTCAAAAGGAATCTACCCTACATTTAGT 39943
Score = 141 bits (156), Expect = 8e-29
Identities = 162/215 (75%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| || || ||||| || || |||| || | ||||| || | |||
Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
||||| |||||| | || |||| |||| || || || || || || || || |||
Sbjct 40707 GACACAATCGAG--AATGTCAAAGCTAAAATACAG-GATAAGGAGGGCATCCCCCCAGAC 40763
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | |||||||| || || ||||| ||||||| ||||||| || ||||||
Sbjct 40764 CAACAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTAC 40823
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|||||||| ||||| || || || || ||||||||
Sbjct 40824 AATATTCAGAAAGAGTCAACCCTGCACTTAGTGCT 40858
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || | || || ||| | || || | ||||| || | |||
Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || |||| |||||| ||||||||||| ||||| || || |||
Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || |||||||||| ||||| ||||||||||||| ||| || || || |||||
Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||| || | || ||||| || | ||||||| ||
Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGG 40189
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | || || || ||||||| | || |||||| | ||
Sbjct 41331 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 41390
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | ||| || ||| || || || || ||||| || ||||||
Sbjct 41391 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 41450
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || ||||| || ||||| ||||| |||| |||||| || || || ||
Sbjct 41451 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 41510
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||||||||| || | |||||||| ||
Sbjct 41511 ATCCAAAAAGAATCTACTTTGCATTTAGTACT 41542
Score = 116 bits (128), Expect = 3e-21
Identities = 155/213 (73%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||||||||| ||||| | || || || | || || | || |||||| | |||
Sbjct 40419 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 40478
Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | || || || | ||| || ||||| || ||||| || || ||
Sbjct 40479 GACACCATTGAAAATGTAAAGGCTAAGATTCA-AGATAAAGAGGGTATTCCCCCAGATCA 40537
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||| || |||| ||||| ||||| || ||||||||| |||||| || || |||||
Sbjct 40538 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 40597
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| |||||||| || || || |||||||| ||
Sbjct 40598 CATCCAAAAAGAGTCTACCCTTCATTTAGTACT 40630
Score = 109 bits (120), Expect = 5e-19
Identities = 164/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||||||||| |||| || ||| | |||||| | ||||| || | ||
Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|||||||| || | || |||| || | || |||||||| || ||||| || ||
Sbjct 41163 GACACTATTGAA--AATGTTAAAGCCAAGATCCAA-GACAAAGAGGGTATTCCCCCAGAT 41219
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
||||| || | ||||| || ||||| || | || |||| || ||| | || |||
Sbjct 41220 CAACAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTAC 41279
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| ||||| ||||| | || ||||| || | || |||||||
Sbjct 41280 AATATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGG 41329
Score = 105 bits (116), Expect = 6e-18
Identities = 153/213 (72%), Gaps = 6/213 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| || || | || |||||| |||| || | ||||| || | ||
Sbjct 39506 AATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 39565
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| ||||| || | || |||| |||| ||| ||||| ||||| ||||| || ||
Sbjct 39566 CGATACTATTGAA--AATGTAAAAGCCAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 39622
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || | ||||| || || || ||||| ||||| | |||||| | || ||
Sbjct 39623 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 39682
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207
||||||||||||||||| || || || || ||
Sbjct 39683 TAATATTCAAAAAGAATCTACTCTTCACTTGGT 39715
Score = 102 bits (112), Expect = 7e-17
Identities = 163/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
||||||||||||||| || || | || || ||| | || || | ||||| ||| | ||
Sbjct 40874 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 40933
Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
||||| || || | || |||| || | ||| || || ||||| ||||| || ||
Sbjct 40934 AGACACCATTGA--AAATGTTAAAGCTAAGATTCA-AGATAAGGAAGGAATTCCTCCAGA 40990
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || |||| || || || |||||| | ||||||| ||||| || || ||
Sbjct 40991 TCAACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTA 41050
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||| || ||||| || || || || || || || | || |||||||
Sbjct 41051 CAATATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 41101
>seq1305
Length=286731
Score = 129 bits (142), Expect = 5e-25
Identities = 175/241 (73%), Gaps = 6/241 (2%)
Strand=Plus/Minus
Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055
||||||||||| || || ||||| | || |||||| |||| || |||| |||||| |
Sbjct 24987 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 24928
Query 25056 TCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCT 25112
|| || ||||| || | || |||| |||||| || || ||||| ||||||||
Sbjct 24927 TCCGATACTAT--AGAAAATGTAAAAGC-TAAAATCCAAGATAAGGAAGGTATTCCACCA 24871
Query 25113 GACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGAT 25172
||||| || || | || ||||| || |||||| ||||||||| || || || ||
Sbjct 24870 GACCAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGAC 24811
Query 25173 TACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTAT 25232
||||| |||||||| |||||||| | ||| | ||||| | || | ||||| || |||
Sbjct 24810 TACAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTAT 24751
Query 25233 T 25233
|
Sbjct 24750 T 24750
>seq4254
Length=614577
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/195 (72%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149
||| |||||| |||||||| | || || || ||||||||||| || | | || ||
Sbjct 229991 ACCAACATAACCATTAGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 229932
Query 51150 ATAACCCAATGCCATGTCTGCACTAG-GCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208
| | ||| ||| ||| | | | | |||||||| | ||| |||||| ||||||||
Sbjct 229931 AAACTTCAAAGCC-TGTTCGGGCGACTGGGTCCATTCTAAAATCTTCTTGCACCAGTACA 229873
Query 51209 TGCGCATGTAACCGTGCATCTTGCCCTCGCAACGAAGCTGCGCTTGAGCCGAGTTCCACA 51268
|||| | | |||| |||||||||||||| ||| || |||||| |||||||| |
Sbjct 229872 TGCGTAGGAAACCATGCATCTTGCCCTCTTTCACAAGTTGTATTTGAGCTGAGTTCCATA 229813
Query 51269 ATTCGTCGTGAGTTT 51283
| || ||||| ||||
Sbjct 229812 AGTCATCGTGTGTTT 229798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433305243373835
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |