Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_008348.1
Length=168041
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 269 3e-67
seq2396 113 5e-20
>seq3463
Length=282612
Score = 269 bits (298), Expect = 3e-67
Identities = 786/1200 (66%), Gaps = 23/1200 (2%)
Strand=Plus/Plus
Query 51249 CCCAGGCCCTCGTGCATGGCGTTCAGTAGGTCGCCGTTGTCAGCGTCGATTTCCCACGCA 51308
|| || ||| || |||||| ||||||||||| ||||| |||||||| | |||||| |||
Sbjct 181823 CCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCA 181882
Query 51309 AACAATCCCGCCAACCCGTTCGCAAGCACGTACTGGCCCTTGGCGCGAACGGATCGAGCG 51368
|| | || | | | ||| || || | ||||| | ||| |||| |||
Sbjct 181883 AAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTAGCA 181942
Query 51369 TTGTCGAACGTGATCAGGTTGCCCGC-GATCGGTTCGAAGCCGTACGCAGCCTCGGCGAT 51427
|| || | || | || | || | ||| ||| |||| |||| | || | |||||
Sbjct 181943 TTATCATAGGTTACAAGATCTCCAGTTGAT-GGTCTGAAGACGTAAGGGGCTTGGGCGAC 182001
Query 51428 CAGATCGTAGTAGAACTCGTAGT--CTTTGA-CGAACTCGTTCGCGATCTGCCGATAGTC 51484
||||| | |||||| | | | |||| ||| || ||||| |||| || ||||||
Sbjct 182002 ATTGTCGTAATGGAACTCCCACTTGCCTTGAGCGATTTCATTCGCAATCTCCCTATAGTC 182061
Query 51485 GACCACCCCATTTTCCCAGGTGCCTTCGATGGGTCCGCCGGCGACGCCGCTGAACCAGTT 51544
||||| || | || ||| || |||| || ||||| ||| ||| |||| |
Sbjct 182062 AACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAAT 182121
Query 51545 CGGTTCGTAGTCGTAGCCGGTCACGTTCGACCAGCCGCGAGCGTACATCGCCACGCCGAC 51604
||| || | ||| | ||| | ||| || ||| | ||||| || || || ||
Sbjct 182122 --GTT-GTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTAC 182178
Query 51605 GACGATCTTCT---GATTGCGCACGCCCTGTTCGAGAAGCGACGACACGGCATAGTCGGT 51661
|| ||||||| |||| ||| ||||| | || | | || | |||| |
Sbjct 182179 TACAATCTTCTTAGGATT---CACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGA 182235
Query 51662 GGTGTACTTTTCGTCGGGGTTCCATTGGGGCGCGAACAGTGTGGTCTGGTAGCCCAGATC 51721
||||| |||| | ||| ||||| |||||| ||| || || || | || |||
Sbjct 182236 TGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAGT 182295
Query 51722 GGTGTTGGACCACGCACCCTTGAAATCGTAGTTCATGAGGAAAATGTAATCCAACTGCGT 51781
| || ||||| || |||||||| ||||| |||| | |||||| | ||||| | |
Sbjct 182296 GTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 182355
Query 51782 CTGCGCCCGAGCGTAGTCGACGACTTGAATTTTATCGTAGCCCGCGCTGATGGCGCTGGT 51841
|| ||| | ||||| || ||||| |||||||| | || ||||| || || ||
Sbjct 182356 TTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGT 182415
Query 51842 CAACAGGTA---CGAACGGTTCGTGGCGGCGCTCAACTCGTCGAGCATGTCGCGCAGCTC 51898
|| ||| | || ||| | || | | | |||||||||||| || || | ||
Sbjct 182416 TAATTCGTATTTCTTACCATTCTTAGCTGAG---AGCTCGTCGAGCATCTCACGTAATTC 182472
Query 51899 GGTCAAAAGCGTCACGTACGTCGCACCATCGCGATCGGGATCGCCCAGGTCGGGATTGGC 51958
||| | | || || ||||||| || || || ||||| || || ||
Sbjct 182473 TTTCATCAAACTTACATAACAATCACCATCT---TCTGGGCTACCGAGGTCAGGGTTAGC 182529
Query 51959 GCCTTTGCCGCCCGGAAACTCCCAGTCGACGTCGACTCCGTCGAAGAACTTCCAAGTCAG 52018
|||||||| || || |||||||| |||| || || || |||||||| ||||| || ||
Sbjct 182530 ACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAG 182589
Query 52019 CAGAAACTCGCGAACCGATTCGACGAAGGTTGCGCGTTTGCTCGCGTCGTGCAGGAAGAA 52078
|||||||| || || | || || || | || ||| | |||||
Sbjct 182590 AAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAA 182649
Query 52079 GAACGGATCGGACAGCGTCCAACCGCCGATCGAGGGCAGAATCTTGAGCGAAGGATTGGC 52138
||| ||||||| |||||||| || || || ||||| |||||||| | ||| |||
Sbjct 182650 GAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGC 182709
Query 52139 CCGTTTGGCCGCCATCAGCTGTCCAAAGTTTCCCTTGTACGGATCGTTCCAGGCCGAGAC 52198
|||| | ||| | || |||||||| || ||||| || |||||||| | || |
Sbjct 182710 TTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAA 182769
Query 52199 GCCTTTCTGCGGTTTCTGCAGCGCCGCCCAGGGATCGTGAATCGTCACCTTAAAGTCCGA 52258
||||| || ||||| || | || ||||| |||||||| || | || || ||||||
Sbjct 182770 TCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTC 182829
Query 52259 CCTGCCCACGCACGACCGTTGCAACGCTTCGAAACTGTTGTCGATCGGTTTCAGGCTGTC 52318
| ||| || ||||| || | |||| ||||||| |||||| ||| | || ||
Sbjct 182830 ACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATC 182889
Query 52319 GTTGATGCCGTCGCCTCCGCACATGGGAATGAAGCCGTACAGCAGATGCGACAGGTTCGG 52378
||||||||||| || ||||| || || || |||||||| |||| ||| | || || ||
Sbjct 182890 ATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGG 182949
Query 52379 CAACGGCACCAGATCTACGGGAAAGTTGCGCAAGTAAACGCCCCATTCGACAAAGTAGGC 52438
| || | |||| ||||| || || | || || |||||||| || ||||||||
Sbjct 182950 TATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGC 183009
>seq2396
Length=191974
Score = 113 bits (124), Expect = 5e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 38443 ACTGGCCCAAGAGCATGAAGCAGACGCCGCAACAGTTGGCCGAGGCCGGCTTCTACTATT 38502
||||||| || |||||||||| ||| | | | ||||| || || |||| |||
Sbjct 136569 ACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCTACA 136628
Query 38503 CGGGCACCGGAGACCAGGTCAAATGTTTCTTTTGCGGCGGCGGCCTTAAGGACTGGGAGC 38562
| ||| || ||| | || || |||| || | |||||| || ||||||||||||
Sbjct 136629 CCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGACTCAAGGACTGGGAGA 136688
Query 38563 CTGCGGACGATCCGTGGGCGCAGCACGCGCGCTGGTTCGACAGGTGCGCTTACGTGCTCA 38622
| |||| ||||||| |||||||||||||||||||||| ||||||| |||||||
Sbjct 136689 ACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGCAGC 136748
Query 38623 CCGTCAAAGGCGCCGACTACGTTCA 38647
||||||||| || ||||| ||
Sbjct 136749 TGGTCAAAGGCCGAGAGTACGTCCA 136773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537574243347640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |