Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 159 4e-34
seq896 143 3e-29
seq3415 141 1e-28
seq3460 134 2e-26
seq2217 134 2e-26
seq1521 134 2e-26
seq1606 129 7e-25
>seq1351
Length=825266
Score = 159 bits (176), Expect = 4e-34
Identities = 165/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414
||| | ||| ||||| || ||||| | ||| ||||| || ||||| ||||| ||||| ||
Sbjct 602220 ATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGC 602279
Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474
|||||| || || ||||| || || ||||| || | || || ||||| ||||| | |||
Sbjct 602280 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTC 602339
Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534
|| | || ||||| || |||||||| || || ||||| || || || | |||||| ||
Sbjct 602340 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACATGCTTGAT 602399
Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570
||||||||||||| |||||| | | ||||||||
Sbjct 602400 AAAATGTTTCTCACAATCTTTTAATGTCTCCCAATC 602435
Score = 156 bits (172), Expect = 5e-33
Identities = 160/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193
||||| ||||| || || || || | ||| |||||||| || | ||||||||||||||||
Sbjct 601414 TCATTACTGAAAGTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCA 601473
Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253
|| || || || |||||||| || || || |||||||| || | |||||||| ||||
Sbjct 601474 AAGCTGCCTGAGAAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAAT 601533
Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
| || | || |||| |||||| | ||| ||||| || || || ||||||| ||| |||
Sbjct 601534 GTAGCTGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGT 601593
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342
|| ||||| || || || |||| | ||||
Sbjct 601594 AGAGTTTCAATTGCATTGAATAAGAAATC 601622
Score = 125 bits (138), Expect = 8e-24
Identities = 107/132 (81%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649
|| |||||||| ||||||||||||||||||| |||||||| ||||| | |||||| |||
Sbjct 602579 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATATCT 602638
Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709
||||||| ||||| ||||| |||||||| |||| || || | | | || || |||
Sbjct 602639 GGATATTGGATTGGGAATATAACAAAACGTCTAGGATTTTCCCTCAACAGGGGTTCAAGT 602698
Query 93710 TGTGGGTCAAAC 93721
||||||||||||
Sbjct 602699 TGTGGGTCAAAC 602710
>seq896
Length=399071
Score = 143 bits (158), Expect = 3e-29
Identities = 94/103 (91%), Gaps = 2/103 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||
Sbjct 251923 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGCG 251864
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTATTGGAAttttt 126366
|||||||||||||||||||||||| ||||| ||| |||| ||
Sbjct 251863 TGGGTTCGAACCCCACACCTGACATATTATAATTATAATTGTT 251821
>seq3415
Length=568690
Score = 141 bits (156), Expect = 1e-28
Identities = 87/92 (95%), Gaps = 2/92 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||
Sbjct 175821 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGATTGGGAGC 175880
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATT 126354
||||||||||||||||||||||||||||| ||
Sbjct 175881 GTGGGTTCGAACCCCACACCTGACAAATTTTT 175912
>seq3460
Length=473000
Score = 134 bits (148), Expect = 2e-26
Identities = 98/110 (89%), Gaps = 4/110 (4%)
Strand=Plus/Plus
Query 126247 TTTTGCGCTTCTATTTACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATC 126306
|||||| ||| ||| | |||||||||||||||||||||||||||||||||||||| ||
Sbjct 313615 TTTTGC-CTTATATAAAACGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTC 313673
Query 126307 TGGTTCCC--TCGGGAGCGTGGGTTCGAACCCCACACCTGACA-AATTAT 126353
|||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 313674 TGGTTCCCGAGAGGGAGCGTGGGTTCGAACCCCACACCTGACATAATTAT 313723
>seq2217
Length=136328
Score = 134 bits (148), Expect = 2e-26
Identities = 86/93 (92%), Gaps = 2/93 (2%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 39842 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGGAGC 39783
Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTA 126355
||||||||||||||||||||||||||| | |||
Sbjct 39782 GTGGGTTCGAACCCCACACCTGACAAACTTTTA 39750
Score = 129 bits (142), Expect = 7e-25
Identities = 87/95 (92%), Gaps = 3/95 (3%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGG--AGC 126322
||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct 38540 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGGGGAAGC 38481
Query 126323 GTGGGTTCGAACCCCACACCTGACA-AATTATTAT 126356
||||||||||||||||||||||||| | || ||||
Sbjct 38480 GTGGGTTCGAACCCCACACCTGACAGACTTTTTAT 38446
>seq1521
Length=413681
Score = 134 bits (148), Expect = 2e-26
Identities = 83/88 (94%), Gaps = 2/88 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 268828 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGAGAGGGAGCG 268887
Query 126324 TGGGTTCGAACCCCACACCTGACAAATT 126351
||||||||||||||||||||||||||||
Sbjct 268888 TGGGTTCGAACCCCACACCTGACAAATT 268915
>seq1606
Length=1333114
Score = 129 bits (142), Expect = 7e-25
Identities = 80/85 (94%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct 449822 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGGGAGGGAGCG 449881
Query 126324 TGGGTTCGAACCCCACACCTGACAA 126348
|||||||||||||||||||||||||
Sbjct 449882 TGGGTTCGAACCCCACACCTGACAA 449906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556830806085160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |