Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 311 7e-80
seq3345 297 2e-75
seq2787 154 1e-32
seq1305 141 8e-29
seq3424 122 7e-23
>seq3463
Length=282612
Score = 311 bits (344), Expect = 7e-80
Identities = 808/1215 (67%), Gaps = 29/1215 (2%)
Strand=Plus/Plus
Query 48510 TTGCCAAGGCCAATGTGCATAGCATTCAACAAATCGCCATTGTCAGCGTCGATTTCCCAT 48569
|| || || || |||| ||| ||||||| | || || || |||||||| | ||||||
Sbjct 181820 TTACCGAGACCCATGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAA 181879
Query 48570 GCAAAGAGGCCTCCTAAATTGTTGTCTAGCACGTATTGACCTTTGTCCATAACAGATTGT 48629
|||||||| || |||| ||||| | | || |||| ||| || || ||||| |||
Sbjct 181880 GCAAAGAGACCACCTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGATCTA 181939
Query 48630 ACACTATCGTAACTGATGAGATCACCACTGTCCGCTTTGGTCACGTACGCTGCTTTAGCG 48689
|| |||| || | | ||||| ||| | | | || ||||| | |||| |||
Sbjct 181940 GCATTATCATAGGTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGCG 181999
Query 48690 G---TGTCGTCAT---ACCTATATTTGTATT---CG--TTAATACGCGATTGAATGTGCC 48738
|||||| || || | ||| || || || || ||| ||| | ||
Sbjct 182000 ACATTGTCGTAATGGAACTCCCACTTGCCTTGAGCGATTTCATTCGC-----AATCTCCC 182054
Query 48739 TATAGTCGACGACACCGTCCTCCCACGTCCCGGTAACGGGGCCGACGGCCACACCGCTAA 48798
||||||| || || ||||| | ||| || || | || || || || || | |
Sbjct 182055 TATAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGA 182114
Query 48799 AGGGGTTATCGTCGCTGTAATCGAGGACACCGGTCCATCCGCGACCGTACATTGCCACAC 48858
|||| | | ||| ||||||| | || || ||||| || ||||| ||||| || ||||
Sbjct 182115 AGGGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACAC 182174
Query 48859 CCAATACAATTTTGTTGGGTCTCACGCGTTGGTCCAAAAGAGCATTC-ACCGCAAAATCC 48917
| | |||||| || || || |||| | || ||| | || ||| || | || ||
Sbjct 182175 CTACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCA-AGTATTTTACTCCGAAGTCA 182233
Query 48918 GTAGTGTAATGTTCGTTTACATTCCATTTCGGAGCATACAATGCCGTCTGGTGACCCAAA 48977
| |||||| ||| || |||||| || || ||||||| ||| || || || | |
Sbjct 182234 GATGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGA 182293
Query 48978 TCAACATTCGACCAGGCACCCTTAAAATCGTAGTTCATTAAAAATATTTTATCTAAATAA 49037
|||| |||||||| ||||| || ||||| |||| || || || | ||| | ||||
Sbjct 182294 GTGTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAA 182353
Query 49038 TTTTGGGCATCGTTGTATTTAACCACGGCAATTTTGTCGTCGCCTGCGCTAATGGCGCTT 49097
||||| || | | || | || || ||||| || || |||||||| ||
Sbjct 182354 TTTTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAA 182413
Query 49098 GTTAATTCAAAATTACGGCCGGT-TTCGCGTTCAAGATCGTCGAGCATTTCGCGTAATTC 49156
|||||||| | || || | || || | || ||||||||||| || ||||||||
Sbjct 182414 GTTAATTCGTATTTCTTACCATTCTTAGC-TGAGAGCTCGTCGAGCATCTCACGTAATTC 182472
Query 49157 TTTCAAGAGAACAACATAAGTGTGTCCGTCGTGTTGCGAATCGCCCAACAACGGATTCGC 49216
||||| | | |||||| | || || | | | | || || || || ||
Sbjct 182473 TTTCATCAAACTTACATAACAATCACCATCTTCTGGGCTACCGAGGT-CA--GGGTTAGC 182529
Query 49217 CCCTTTGCCGCCCGGAAATTCCCAATCTATGTCGACGCCGTCGAAAAATTTCCAAGTTAA 49276
|||||||| || || || |||||||| || || || || ||||| |||||||| ||||
Sbjct 182530 ACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAG 182589
Query 49277 CAAAAATTCGCGCACCGAATCTACAAA-CACGT-CACGTTTATGCGCATCGTGCATAAAG 49334
| ||| || || || | ||||| | || | | | || | || | ||||
Sbjct 182590 AAGAAACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTG--TCAACTAAAAAG 182647
Query 49335 TAAAATGGATCGGACAACGTCCAACCCCCGATGGATGGCAATACTTTTAAATTG-GGATT 49393
| || ||||||| | |||||| || || || || || || | | || |||| ||
Sbjct 182648 AAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGG-AAGAATCTTCAATTCAGGGCG 182706
Query 49394 TGCTTTTTTAATTGCCATCAATTGACCGAAATTGCCTTTGTACGGTTCGTTCCAAGCGGA 49453
|||| ||| | || ||| ||||| || || ||||||||||| || |||||||| | ||
Sbjct 182707 GGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGA 182766
Query 49454 CACACCTTTTTGGGGTTTTTGCAGCGCAGCCCACGGATCGTGAATAGACACTTTGAAATC 49513
|| |||||||| |||||||| | || ||||| |||||||| || || |||||||| ||
Sbjct 182767 CAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTC 182826
Query 49514 GTCCCGGCCAGCGCAACTTTTTTGTAATGCCTCAAAACTGCCCGTTATCGTTTTCAAACT 49573
|| ||||| || |||| ||| | |||||||| ||| ||| |||||
Sbjct 182827 CTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACT 182886
Query 49574 GTCGTTAATGCCGTCGCCCCCGCAAATTGGCACGAAACCGTACAGCAGATGCGATAGATT 49633
|| || |||||||| || ||||||||||| | || ||||| |||| ||| | |||||
Sbjct 182887 ATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATT 182946
Query 49634 TGGTGCGGGTACGCGATCGGCGGGAAACGATCGACCGTACACACCCCACTCGACAAAGTA 49693
||| |||| ||||| |||| || | | || |||||||| || || |||||
Sbjct 182947 AGGTATAGGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTA 183006
Query 49694 CGCAGCGACAACTTT 49708
||| | ||||||||
Sbjct 183007 GGCACCCACAACTTT 183021
>seq3345
Length=207354
Score = 297 bits (328), Expect = 2e-75
Identities = 961/1467 (66%), Gaps = 55/1467 (4%)
Strand=Plus/Minus
Query 128779 TTGTCCACGGTAAATTTAATAGCGTCCGCTGCCGGCTTGGTGCGCAAATAGTACATGCCT 128838
||||| || ||||| | |||||| | ||||| || || ||||| || |||||||| |||
Sbjct 113386 TTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCCT 113327
Query 128839 GTTTTCAAACCGCTTTTCCAAGTGTGCATGTGAATCGTGGTCAACAATGCGTAGGTGGGT 128898
||||| ||||| ||||||||| ||| | ||||||| || | | | ||| | |||
Sbjct 113326 GTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAGGT 113267
Query 128899 TGACTCaaaaaaaTATTAAATGATTGACTTTGATCAATAAAGGGGCCGCGATCGGCAGCC 128958
| | | | || ||||| ||||||||||| || ||||| | || | ||| || |||
Sbjct 113266 TTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTGCC 113207
Query 128959 ATACCAATCAAATTTTTCACTTTCATTTCCCACACCGTTTTGTAAAGCTCTCTCACGTGT 129018
|| || | |||||| | || ||||| || |||||||| | ||||| | | |
Sbjct 113206 ATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCT 113147
Query 129019 TTTGGTATTTCTTCAATGTTCTGCACGCTGCCGTTGTTTGCAATAATTTTGTTTCGCATC 129078
|| || |||| |||||| | || | || ||||| ||||| ||| |||
Sbjct 113146 TTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCATA 113087
Query 129079 TGTTCGTTGTACAAATTCAGTTTGA-TCAAATC-GTCGGTCAAG-TATTTGTTTATTACT 129135
| ||| | ||||| |||| || ||||||| ||| | ||| | | ||| | |||
Sbjct 113086 TCTTCATCCCACAAA-TCAGCCCGAGTCAAATCAGTCAG--AAGATGATGGTTCACTACA 113030
Query 129136 TGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAACGAT 129195
|||| || || | || || | | |||||| || || || || ||||| |||
Sbjct 113029 GGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGAT 112970
Query 129196 TCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGCGAG 129255
||| ||||||| | ||||| || || | || || ||||| ||| | | || ||
Sbjct 112969 TCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGAGAA 112910
Query 129256 TTTCGCAAACCGTGCTGTTTAATGTCtttt-tttAATTG-TGTCCAGTCCCACATCGATG 129313
|| |||||||| || ||| | |||||| ||| | | | ||||||||| | ||
Sbjct 112909 TTGCGCAAACCATG--TTTTGCTATCTTTTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTG 112852
Query 129314 TGGGTGTGTGATTCCACAAGTCGTATTGCAATATACCCAAACTGGCGGGA----CTGGAA 129369
| || || | | ||||| || || || | ||||| || || ||| || ||
Sbjct 112851 TAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGAT 112792
Query 129370 AAGTAGGAATCGTGCACGCCGTAAGCTTTT---GCCAATTCGCAACTCGCTTCCAATGCG 129426
| || | |||| || | ||||| || ||||| ||||| ||||| |||||
Sbjct 112791 ATGT--GCTGTATGCA--CCTT---CTTTTTCAGCTAATTCACAACTAGCTTCTAATGCA 112739
Query 129427 CCAAAATAAATTGTTTCGGCAAT-TTTGGTG-TTCAACACTTTGGCCTGGTCGCTTTCGT 129484
||| ||||||||||||| ||| |||| || || | | | | || | || |||||||
Sbjct 112738 CCATAATAAATTGTTTC--AAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGT 112681
Query 129485 ACGGCATACGCAACATGGCAAATGTGTCGGCCAAACCTTGAATACCCACACCGATGGGTC 129544
| | || | || || |||| | || |||| || |||| ||| | ||| || ||||
Sbjct 112680 AAGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTC 112621
Query 129545 GATGTTTTCTATTGGA--TTTTTGTGCCGACAACAAGGGATAGTAGTTGATGTCTATAAT 129602
|||| | |||| || |||||| | ||| ||||| | || | || ||||
Sbjct 112620 TATGTCTCATATTTGAAGTTTTTGCTTCAGGGACA--GGATAAAAATTAACATCAATAAC 112563
Query 129603 TTTGTTTAAATTCTTGA-CCACAATTTTCGTTACGTATTTTAACATTTCAAAATTGTACT 129661
|||||||||||| |||| ||||| || || | | |||||| ||| |||||| |
Sbjct 112562 TTTGTTTAAATT-TTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAA-- 112506
Query 129662 CGCCTACATCGATGTCGACAAATTGATTGACACAAATCGAGGCCAAATTGCAGACGGCAC 129721
| || | || ||||| || | || || || | ||||| || ||
Sbjct 112505 ----TCTATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCA 112450
Query 129722 TTTCGTTTTTGTCACTGTACTCGACAATTTCGGCGCACAAATTACTATTTTTAATGGTGC 129781
||| | || | |||| | |||| || | ||| | ||| ||| |||||| ||||
Sbjct 112449 CTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGC 112390
Query 129782 CCAAATGCTTTTGATTACTTTTCATGTTGCAAGCATCTTTGTACATCATGTACGGCGTGC 129841
| | || ||||||||||| || |||| |||||||| || |||| |||||| || || |
Sbjct 112389 CAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTAC 112330
Query 129842 CCGTTTCGACTTGCGTTTCGACAATGGTCCTGAACAAGTCTCGAGCCTTGATCTGTCTTA 129901
| || || ||||| | ||| | ||| | | | | || ||| |||| ||| ||| |||
Sbjct 112329 CAGTCTCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTA 112270
Query 129902 CAAA---TTTGCCACATTTCTCGTATGCCACATACAGTTGTTCAAATTCTGAGCCGTGTA 129958
||| ||| | || || ||| |||| |||| ||||||||| || |
Sbjct 112269 TAAATCGTTTTTC---TTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCC---AA 112216
Query 129959 CGGTGT---CGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTT 130015
| || |||| || | ||| | |||||||| | |||||| | | ||||| ||
Sbjct 112215 AGCAGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTT 112156
Query 130016 CGACTCGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTC 130075
| |||| ||||||||||| ||| |||| ||| | ||| || |||| |||| ||| |
Sbjct 112155 CTACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCA 112096
Query 130076 TATCCTCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACG 130135
| || || |||| |||| || | || | ||| || | ||||| || ||||| |
Sbjct 112095 TTTCTTCCTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAG 112036
Query 130136 GTTCAACATAAATTGCCATTGCGCCCTTCCGTTTG---CCCCCTTGGTCAACGTGGCGCA 130192
| || | |||||| || | ||| || |||||| || ||||| || || | |
Sbjct 112035 GCTCTAAATAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGG 111976
Query 130193 CGGCATTGTTGTAGACTCGCAACATTG 130219
| | |||||| || |||| ||||||||
Sbjct 111975 CAGTATTGTTATACACTCTCAACATTG 111949
>seq2787
Length=76071
Score = 154 bits (170), Expect = 1e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || |||| || || || | ||||| || ||||| | |
Sbjct 40419 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 40478
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | || || |||||||| || ||||||||||| || ||||||
Sbjct 40479 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 40538
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| ||||| ||||| ||| |||| ||| |||||| | || || ||||||
Sbjct 40539 CAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 40598
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| |||||||| || ||| | |||||||| |||| |||| || |||
Sbjct 40599 ATCCAAAAAGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGGT 40646
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| |||||||||||||| |||| || || || | || || ||||||||| || |
Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| ||||| |||||||| ||||| || ||||| |||||
Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||| || || || || || ||| |||||| | || || ||||||
Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || || || || ||| | ||| |||| |||| |||| || |||
Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGT 40418
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||| | || || ||||| ||||| | || || || | ||
Sbjct 39735 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCC 39794
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||| || |||||||| ||||||||||| || ||||||
Sbjct 39795 GACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 39854
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| || ||||| |||| ||| ||| || | || ||||| ||
Sbjct 39855 CAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAAT 39914
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| ||||| ||| |||||||||| ||||| | || || |||
Sbjct 39915 ATTCAAAAGGAATCTACCCTACATTTAGTATTGCGGCTTCGTGGCGGT 39962
Score = 138 bits (152), Expect = 1e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||||||||| | || || ||||| | ||| | ||||| ||| | |
Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| ||||| |||||||| || || ||||| || ||||||
Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| ||||| ||||| || ||||| ||| || || | || || ||||||
Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||||||||| || | || |||||
Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGT 40171
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| ||| | || || || || ||||| | || ||||| | ||
Sbjct 41331 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCC 41390
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || || || ||||| |||||||| ||||| || || |||
Sbjct 41391 GACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAA 41450
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| || ||||||||||||||| |||||| | || || || |||
Sbjct 41451 CAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAAC 41510
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
|| ||||||||||| || | ||||||||
Sbjct 41511 ATCCAAAAAGAATCTACTTTGCATTTAGT 41539
Score = 132 bits (146), Expect = 4e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | || || ||||| |||| | ||||| ||| || |
Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | ||| || || |||||||| ||||||||||| || ||||||
Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || || || ||||| ||| | |||||| || || | || || |||||
Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTACAAT 41282
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| ||||| ||||| | || ||||| || || || || ||||||
Sbjct 41283 ATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGGT 41330
Score = 129 bits (142), Expect = 5e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 22198 TAGTTTTATACATTTGTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTC 22257
|| ||| |||| | | || ||||| || ||||| ||||| | || |||||||| |
Sbjct 39486 TACTTTGTTACAGATATCAAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATT 39545
Query 22258 ACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAG 22317
||| | ||||| ||| | ||||||| | || || | ||| |||||||||||||||
Sbjct 39546 ACTTTGGAAGTTGAACCTTCCGATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAG 39605
Query 22318 GAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCAC 22377
|| || ||||| || |||||||||||| | || || || || || || || || ||
Sbjct 39606 GAAGGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGA 39665
Query 22378 CGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
||||| | || || || || |||||||||||||| || | || || || |||||
Sbjct 39666 CGCACTCTTTCTGACTATAATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 39721
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| | || || ||||| | ||| | ||||| || | |
Sbjct 40875 ATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCA 40934
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | || || | ||| || |||||||| ||||| || ||||| || ||||||
Sbjct 40935 GACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 40994
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| || || || ||||| | || ||| ||||||| | || || |||||
Sbjct 40995 CAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAAT 41054
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || ||||| || ||| | || || || | || | || ||||||
Sbjct 41055 ATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGGT 41102
Score = 120 bits (132), Expect = 3e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| ||||| || || || || || | || || ||||| ||| | |
Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || ||||| ||||| || || |||||||| || || || || |||
Sbjct 40707 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 40766
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| || || || || || ||| ||||| | || ||||||||
Sbjct 40767 CAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 40826
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| ||||| || ||| | || |||||
Sbjct 40827 ATTCAGAAAGAGTCAACCCTGCACTTAGT 40855
>seq1305
Length=286731
Score = 141 bits (156), Expect = 8e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || |||||||| | || || || ||||| || ||
Sbjct 24984 ATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCC 24925
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| ||||| ||||| ||||| ||||||||||| || ||
Sbjct 24924 GATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAG 24865
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || ||||| || ||||| |||| ||| || || | || || ||||||
Sbjct 24864 CAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAAC 24805
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|||||||| |||||||| | ||| | || | ||| | |||||||||
Sbjct 24804 ATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGT 24757
>seq3424
Length=494560
Score = 122 bits (134), Expect = 7e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || ||||||||||| || ||||| |||| | ||||||||| | |
Sbjct 288611 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 288670
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | || ||| |||||||||||||| || || || || ||||||
Sbjct 288671 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAA 288730
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || || ||||| || || || || ||| ||||| |||| || || ||
Sbjct 288731 CAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTCTCAGACTATAAT 288790
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || ||||| || | || |||||||| ||
Sbjct 288791 ATCCAGAAGGAATCTACTTTGCACTTAGTTTTACG 288825
Score = 114 bits (126), Expect = 1e-20
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||||||||| ||||| || || || ||||| | || | |||||||| | |
Sbjct 289978 GATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACCTTGGAAGTGGAGGCTTC 290037
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|| || | || || | || ||| |||||||||||||| || ||||| || |||||
Sbjct 290038 TGACACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 290097
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
|||| | || || || ||||| || || | || ||| ||||| | || || || ||
Sbjct 290098 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAA 290157
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || || || || | ||||||||||||||
Sbjct 290158 TATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCG 290193
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || || || || ||||| | ||||| || | |
Sbjct 288839 ATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTCT 288898
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| |||||||| || || ||||| ||||| || |||||
Sbjct 288899 GATACAATTGAAAATGTTAAAGCGAAAATTCAGGATAAAGAGGGAATTCCCCCAGATCAG 288958
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | ||||| ||||| || || ||| | || ||| ||||| | || |||||||||
Sbjct 288959 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGATTACAAC 289018
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| |||||||| ||
Sbjct 289019 ATTCAGAAAGAATCTAC 289035
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || || | || || || || ||||| | ||||||||| | |
Sbjct 289295 ATGCAAATTTTTGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTGGAAGCTTCT 289354
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || |||||||| || || ||||||||||| || |||||
Sbjct 289355 GATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGTATTCCCCCAGATCAG 289414
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | ||||| ||||| || || ||| | || ||| ||||| | || || |||||
Sbjct 289415 CAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAAT 289474
Query 22399 ATTCAAAAAGAATCCAC 22415
||||| || ||||| ||
Sbjct 289475 ATTCAGAAGGAATCAAC 289491
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || || | || || ||||| ||||| | || |||||| | |
Sbjct 290207 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTCT 290266
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||| |||||||| ||||| || ||||| || ||||||
Sbjct 290267 GATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAA 290326
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || || ||||| || || | || ||| ||||| | || || || ||
Sbjct 290327 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAAT 290386
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|| || || || || || | ||||||||||||||
Sbjct 290387 ATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCG 290421
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || || || |||| || ||||| || || |
Sbjct 289751 ATGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTCT 289810
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || ||||||||||| ||||| || ||||| || || |||
Sbjct 289811 GACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCAA 289870
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | ||||| ||||| || || || | |||||| || || | || || |||||
Sbjct 289871 CAAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTATCAGACTACAAT 289930
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427
||||| |||||||| || ||||||||||
Sbjct 289931 ATTCAGAAAGAATCTACTTTACATTTAGT 289959
Score = 109 bits (120), Expect = 5e-19
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| ||||| || || | || || ||||| |||| | |||||||| | |
Sbjct 289067 ATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTCT 289126
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||||||||||||||| || || ||||| || || |||
Sbjct 289127 GATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAA 289186
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | ||||| ||||| || |||||| | || ||| || || | || ||||| ||
Sbjct 289187 CAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAAT 289246
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||||||| ||||| || | || || || ||||
Sbjct 289247 ATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCG 289281
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| || || | || || ||||| ||||| | ||||||||| | |
Sbjct 290435 ATGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCT 290494
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | || ||| |||||||| ||||| || ||||| || ||||||
Sbjct 290495 GATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAA 290554
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | || || || ||||| || || | || ||| ||||| | || || || ||
Sbjct 290555 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTATCAGACTATAAT 290614
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || |||||||| |||
Sbjct 290615 ATCCAGAAAGAATCTACC 290632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419705957590585
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |