Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq3479 84.2 5e-13 >seq3479 Length=552715 Score = 84.2 bits (92), Expect = 5e-13 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 3410 ACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCT 3469 |||| | ||||||||||| ||| ||||| |||||||||||||| ||| ||||||||| Sbjct 167110 ACGACGCGCTCTGCATCCTGCCGCTCAACGTCGTCAACGAGAAGATATACGTTTTCCTCT 167169 Query 3470 GGTTCTGGTTC 3480 ||||||||||| Sbjct 167170 GGTTCTGGTTC 167180 Score = 84.2 bits (92), Expect = 5e-13 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 3332 ACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTT 3391 |||| ||| ||||| ||||| | | | || ||| || || |||||||||||||||| Sbjct 285879 ACCCTATGGCTCGAGTATTTCCTAAAGTTACAAAATGCACATTCCACAAATACGGTCCTT 285938 Query 3392 CGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGA 3451 |||| || || | || | ||| || || || | || || ||| | || || |||| Sbjct 285939 CGGGAACCGTGCAGAAGTTCGACGGGCTGTGTGTACTACCATTGAATATTGTAAATGAGA 285998 Query 3452 AGATCTACATTTTCCTCTGGTTCTGGTTC 3480 ||||||| | ||||| |||||||||||| Sbjct 285999 AGATCTATGTATTCCTGTGGTTCTGGTTC 286027 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479411821500