Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3345 127 2e-24 >seq3345 Length=207354 Score = 127 bits (140), Expect = 2e-24 Identities = 462/721 (64%), Gaps = 28/721 (4%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || ||||| | || | || ||||| | ||| |||| || | ||||| || || ||| Sbjct 112999 TAAATATTTGATGTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAG 112940 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTC 114060 || || ||||| || || || | || || || | ||| | ||| ||| | ||| Sbjct 112939 GCAGTCGGCATTGGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTA-TCTTTTC 112881 Query 114061 CTTGAGGGCGTCCCAGTC----------GTAGTTGAGCTTTGTCTCCCCCTGCCACATAT 114110 |||||||| ||||||| |||| ||| |||||| |||||||| Sbjct 112880 TTTGAGGGCAGCCCAGTCCCAAAGGTCTGTAG--GAGTTTTGTC--------CCACATAT 112831 Query 114111 CAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAA 114170 || ||||||||||||||||| ||||| || | | |||| ||||| || || Sbjct 112830 CATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTT 112771 Query 114171 CCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAG 114230 || || ||||| | || || || | || | | ||| ||||| ||||| || | Sbjct 112770 TTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTT 112711 Query 114231 CATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCG 114290 ||| | | || | || || | | | || ||| | ||| |||| | Sbjct 112710 GATTGAGAAGTATTGCTTTCTCACTTTCGTAAGAAATTCTCATCAACACAAACGCATCTG 112651 Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 114350 | | || || ||||| | ||||| || | |||||||||||| || || || Sbjct 112650 CCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAG 112591 Query 114351 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410 || ||||||||||| ||| ||||| | |||| ||||| || |||| |||||||| Sbjct 112590 GGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGA 112531 Query 114411 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGG 114470 |||| | | |||| ||| ||| || | | | |||| ||| || | ||| | Sbjct 112530 TTTCTTTTAATTTTTTAAAATTAAATCT---ATTATTTTCA---ACAAACATGTTAAGTG 112477 Query 114471 CGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCG 114530 | || || || || || ||||| | ||||| | |||||| | | || || | Sbjct 112476 CTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAG 112417 Query 114531 TACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACG 114590 | || | ||| || ||||| ||||| | || |||||||| |||| ||||||| | Sbjct 112416 TGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAG 112357 Query 114591 CATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCC 114650 ||||||| || | ||||||||| || || ||||| ||||| | | ||| | ||||| Sbjct 112356 CATCCTTATACAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGACTTCC 112297 Query 114651 A 114651 | Sbjct 112296 A 112296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597321425041720