Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3463 246 3e-60 seq2787 123 3e-23 seq2916 107 2e-18 seq2566 105 7e-18 seq3441 104 3e-17 seq905 104 3e-17 seq1305 102 9e-17 seq2649 100 3e-16 seq2630 100 3e-16 seq1590 100 3e-16 seq3499 98.7 1e-15 seq2201 98.7 1e-15 seq835 98.7 1e-15 seq462 98.7 1e-15 seq2288 95.1 1e-14 seq1517 95.1 1e-14 seq1367 95.1 1e-14 seq4044 91.5 2e-13 seq3424 91.5 2e-13 seq1915 91.5 2e-13 seq1176 91.5 2e-13 seq1326 89.7 6e-13 seq3467 87.8 2e-12 seq2666 87.8 2e-12 seq2205 87.8 2e-12 >seq3463 Length=282612 Score = 246 bits (272), Expect = 3e-60 Identities = 649/987 (66%), Gaps = 33/987 (3%) Strand=Plus/Minus Query 94966 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 95025 ||||| ||| || || || ||||||||||| || || | | || || |||| ||| Sbjct 183021 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 182962 Query 95026 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGC 95085 | || || || ||||| || ||| | | ||||| || || || |||||||| || Sbjct 182961 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGT 182902 Query 95086 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 95145 ||||| ||||| || ||| ||||| || | ||| ||| | || |||| || Sbjct 182901 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 182842 Query 95146 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 95205 ||| |||| | || || ||||| || |||||||| | | || |||||||| Sbjct 182841 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 182782 Query 95206 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 95265 || |||||||| | || || || || |||||| ||||| |||||||| | ||| Sbjct 182781 CCACAAAAAGGATTGTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAATG 182722 Query 95266 GCTATTCGCAAACATAA-----TCCTCATTTGAAAATTTTGCCTAGCATCGGTGGTTGGA 95320 || | || | || ||| | ||||| ||| | || || ||||| |||| Sbjct 182721 -----TCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 182667 Query 95321 CACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGACT 95380 | || ||| ||||||| ||||| | ||| | | ||| ||| | ||||||| | | Sbjct 182666 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 182607 Query 95381 CTGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAGT 95440 | || || || | | | ||||| || |||||||| || || ||||| ||||||| Sbjct 182606 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 182547 Query 95441 TTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACAT 95500 | || || || || ||||| ||||| ||| | || | || | | ||||| | | Sbjct 182546 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGG-TAGCCCA--GAAGATGGTGATTGTT 182490 Query 95501 ATGTAACTCTATTGAAAGAACTACGCCTAATGCTAGACG-------AACTGGGTGTGGTG 95553 |||||| | | |||||||| |||| ||||| |||| | || | |||| Sbjct 182489 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGACGAGCTCTCAGCTAAGAATGGT- 182431 Query 95554 AACAAACGCGTGTACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTG 95613 || ||| ||||| || || || | | || || | |||||||| | || Sbjct 182430 AAGAAA------TACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTT 182377 Query 95614 ATAGATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTT 95673 |||| || |||| | ||| |||||||| | || || |||||||||||||| Sbjct 182376 GTAGACTATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTC 182317 Query 95674 AAAGGCGCATGGTCCA---ACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCG 95730 || || || ||||| | |||| | | || |||||||| ||||||||||| || || Sbjct 182316 AAGGGAGCCTGGTCAAATGACAC---TCTTGGACATCAAACGCCATTGTACGCGCCAGCG 182260 Query 95731 TGGAACCCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAAAA 95790 ||||| || | || | |||||| |||||| | |||||| | |||| ||| | Sbjct 182259 TGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGA 182200 Query 95791 GTACCTTCCAACAAAATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTG 95850 || | | || || ||||| || || || || ||||| || | || |||| ||| || Sbjct 182199 GTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTT 182140 Query 95851 CACGATTACAAAAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACA 95910 || ||||||||| |||| | || || ||| ||| || || || || ||||| || Sbjct 182139 CATGATTACAAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACT 182080 Query 95911 TGGGAAAACGGTGTCGTCGATTATAGG 95937 ||| || |||| || || || |||||| Sbjct 182079 TGGCAAGACGGAGTGGTTGACTATAGG 182053 >seq2787 Length=76071 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||||| |||||| || || || ||||| ||| ||| || ||||||||||| |||| Sbjct 41330 ACCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 41271 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||||| ||| | || || |||||||| |||||||| ||||| || || || || | || Sbjct 41270 AAGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGG 41211 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||| ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 41210 AATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAAC 41151 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | ||||| ||||| || || || |||||||||||||| ||||| Sbjct 41150 TTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| ||||| || | || || ||||||||||| || |||| ||||| || | Sbjct 39722 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCC 39663 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || | ||||| |||||||| || | || || || || | || | || ||||| Sbjct 39662 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 39603 Query 42113 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171 || | ||| |||| | ||| | | | | || ||| | ||| || || | || | Sbjct 39602 GT-CTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 39544 Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 ||||||| ||||| || || || |||||||| |||||||| Sbjct 39543 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||| || |||| || ||| || |||||||||||||||| || ||| || | Sbjct 40862 ACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACC 40803 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||||| ||||| || ||||| || || ||||| | || | || |||||| Sbjct 40802 ATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTT 40743 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| ||||| ||||| || | | ||||| | ||| || || | || || Sbjct 40742 ATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAAT 40683 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| || || || | || || ||||| |||||||| Sbjct 40682 GGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| || ||||| | || |||||||||||||| ||||||| | || || | Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || ||||| || || ||||| || || || | ||| || || | || | | ||| ||| Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || ||| ||| || | | | | |||||| || || || || | |||||| Sbjct 39829 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 39770 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||||| || || || ||||| |||||||| |||||| Sbjct 39769 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| |||| | ||||| || | ||| | || |||||| || || ||||| |||| Sbjct 40418 ACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGA 40359 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 ||| || || | || || | ||||||||||| || || || |||||||| || | ||| Sbjct 40358 CAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGG 40299 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||| ||||| |||||| ||| | | | | || || | |||||| Sbjct 40298 GATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 40239 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || ||||| || || ||||| || || ||||| || ||||| Sbjct 40238 TTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191 >seq2916 Length=227238 Score = 107 bits (118), Expect = 2e-18 Identities = 73/82 (89%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 ||||| |||||| |||| | |||||||||| ||||||||||||||||||||| ||||| Sbjct 155456 AAAATGTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 155397 Query 57059 CACCACTATACTACCGAGGATT 57080 ||||||||||||||||||||| Sbjct 155396 TACCACTATACTACCGAGGATT 155375 >seq2566 Length=974290 Score = 105 bits (116), Expect = 7e-18 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| |||||| |||| | |||||||||| ||||||||||||||||||||| ||||| Sbjct 870431 AAAAAATTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 870372 Query 57059 CACCACTATACTACCGAGGATTG 57081 |||||||||||||||||||||| Sbjct 870371 TACCACTATACTACCGAGGATTG 870349 >seq3441 Length=658075 Score = 104 bits (114), Expect = 3e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 269699 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 269758 Query 57066 ATACTACCGAGGATTGAATA 57085 |||||||||||||||| ||| Sbjct 269759 ATACTACCGAGGATTGCATA 269778 >seq905 Length=23872 Score = 104 bits (114), Expect = 3e-17 Identities = 85/101 (84%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 56983 AAATTAACGTTTATGAAAAA--TTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGC 57040 ||||||| ||||| ||||| | ||||| |||| | |||||||||| |||||||||| Sbjct 2023 AAATTAAA-TTTATAAAAAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGC 2081 Query 57041 GTGACAGGCGGACATACTCACCACTATACTACCGAGGATTG 57081 ||||||||||| ||||| |||||||||||||||| ||||| Sbjct 2082 GTGACAGGCGGGGATACTTACCACTATACTACCGAAGATTG 2122 >seq1305 Length=286731 Score = 102 bits (112), Expect = 9e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| | | || | ||| | |||||||||| ||||||||||| ||||| |||| Sbjct 24757 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 24816 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || ||||| || |||||||| || || | || |||||||| | ||| Sbjct 24817 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 24876 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||| || |||||| ||| | | | | || ||| | ||||| Sbjct 24877 AATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCAC 24936 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 |||| || |||||||| ||||| || ||||| || || ||||||||| Sbjct 24937 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 24985 >seq2649 Length=242434 Score = 100 bits (110), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||||| ||||| ||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 103081 AAAAATTCTCTCC--GGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 103024 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | |||||||||||||||| ||||| Sbjct 103023 TTACCACTATACTACCGAAGATTG 103000 >seq2630 Length=1043321 Score = 100 bits (110), Expect = 3e-16 Identities = 73/84 (87%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 56998 AAAAAT--TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 57055 |||||| | ||||| |||| | |||||||||| ||||||||||||||||||||| || Sbjct 95243 AAAAATAGTCTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGAT 95184 Query 57056 ACTCACCACTATACTACCGAGGAT 57079 ||| |||||||||||||||||||| Sbjct 95183 ACTTACCACTATACTACCGAGGAT 95160 >seq1590 Length=469570 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 295058 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 295117 Query 57066 ATACTACCGAGGATT 57080 ||||||||||||||| Sbjct 295118 ATACTACCGAGGATT 295132 >seq3499 Length=972244 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| || |||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 130544 AAAAGATTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 130603 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||||||| Sbjct 130604 TTACCACTATACTACCGAGGAT 130625 >seq2201 Length=540919 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 310217 TCTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 310276 Query 57066 ATACTACCGAGGAT 57079 |||||||||||||| Sbjct 310277 ATACTACCGAGGAT 310290 >seq835 Length=305099 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 198113 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACT 198172 Query 57066 ATACTACCGAGGAT 57079 |||||||||||||| Sbjct 198173 ATACTACCGAGGAT 198186 >seq462 Length=121246 Score = 98.7 bits (108), Expect = 1e-15 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 88045 AAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 88104 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | |||||||||||||||| ||||| Sbjct 88105 TTACCACTATACTACCGAAGATTG 88128 >seq2288 Length=132835 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 13724 AAAAGTGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 13665 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 13664 TTACCACTATACTACCGAAGAT 13643 >seq1517 Length=35327 Score = 95.1 bits (104), Expect = 1e-14 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 56995 ATGAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACA 57054 || ||||| |||| |||| | |||||||||| ||||||||||||||||||||| | Sbjct 21775 ATAAAAAAGGATCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA 21834 Query 57055 TACTCACCACTATACTACCGAGGATTG 57081 |||| |||||||||||||||| ||||| Sbjct 21835 TACTTACCACTATACTACCGAAGATTG 21861 >seq1367 Length=102154 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/102 (82%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||| | ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 50780 AAAAGTATTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 50721 Query 57058 TCACCACTATACTACCGAGGAT---TGAATATATAACTTGAA 57096 | |||||||||||||||| ||| |||| ||||| ||||| Sbjct 50720 TTACCACTATACTACCGAAGATGTATGAA-ATATA--TTGAA 50682 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 51300 AAAAAAGTTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 51359 Query 57058 TCACCACTATACTACCGAGGAT 57079 | |||||||||||||||| ||| Sbjct 51360 TTACCACTATACTACCGAAGAT 51381 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 ||||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 53245 TTCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 53304 Query 57065 TATACTACCGAGGAT 57079 ||||||||||| ||| Sbjct 53305 TATACTACCGAAGAT 53319 >seq4044 Length=174331 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| | ||||| || | |||||||||| ||||||||||||||||||||| |||| Sbjct 168645 AAAAAATCTCTCCC--GCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 168702 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | |||||||||||||||| ||||| Sbjct 168703 TTACCACTATACTACCGAAGATTG 168726 >seq3424 Length=494560 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||||| |||||| || |||||||| || |||||| || ||||| || || | | Sbjct 290433 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 290374 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 | || || | || || || ||||| || ||||| || |||| || || || | || Sbjct 290373 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290314 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCCAC 42160 | || ||||| || ||| | |||| | | | | | | || || | |||||| Sbjct 290313 ATGCCTTCCTTATCT-TGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 290255 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 || | ||||| ||||| || || || ||||||||||| ||||||||| Sbjct 290254 CTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 290206 >seq1915 Length=142511 Score = 91.5 bits (100), Expect = 2e-13 Identities = 72/85 (85%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| | |||| |||| | |||||||||| ||||||||||||||||||||| ||||| Sbjct 94653 AAAAAATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 94594 Query 57059 CACCACTATACTACCGAGGA-TTGA 57082 |||||||||||||||| || |||| Sbjct 94593 TACCACTATACTACCGAAGACTTGA 94569 >seq1176 Length=33059 Score = 91.5 bits (100), Expect = 2e-13 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 27241 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 27300 Query 57072 CCGAGGATTG 57081 |||| ||||| Sbjct 27301 CCGAAGATTG 27310 >seq1326 Length=586218 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 56997 GAAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 57056 |||||| | ||| |||| | |||||||||| ||||||||||||||||||||| ||| Sbjct 400609 GAAAAAATACCTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATA 400550 Query 57057 CTCACCACTATACTACCGAGGA 57078 || |||||||||||||||| || Sbjct 400549 CTGACCACTATACTACCGAAGA 400528 >seq3467 Length=704531 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 7687 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTATACTA 7628 Query 57072 CCGAGGATTGAATATA 57087 |||| || || | ||| Sbjct 7627 CCGAAGACTGTACATA 7612 >seq2666 Length=173588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 101042 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 101101 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 101102 CCGAAGAT 101109 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 106802 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 106861 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 106862 CCGAAGAT 106869 >seq2205 Length=65158 Score = 87.8 bits (96), Expect = 2e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 3744 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 3803 Query 57072 CCGAGGAT 57079 |||| ||| Sbjct 3804 CCGAAGAT 3811 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 16079 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 16138 Query 57072 CCGAGGATTG 57081 |||| || || Sbjct 16139 CCGAAGACTG 16148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543183541200560