Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq3463 235 5e-57 seq3424 145 8e-30 seq3345 140 3e-28 seq1305 120 3e-22 seq2787 118 1e-21 >seq3463 Length=282612 Score = 235 bits (260), Expect = 5e-57 Identities = 737/1128 (65%), Gaps = 25/1128 (2%) Strand=Plus/Minus Query 27312 ACCAAATGACAGTAAAAGTTTGCAACGCCGACGGCTGCGCCACCAGCGCGCCTGTGTCCG 27371 ||||||||||||| || ||||||| | |||||||||| | || | || ||| Sbjct 183170 ACCAAATGACAGTGGAACTTTGCAATGACGACGGCTGCAGTTCAAGTGATCCCA---CCG 183114 Query 27372 ---TCGTCGTGGCCGACACCGACGGTTCGCATTTGGCGCCGCTGCCTTA--CGTTTGGTC 27426 | ||||||||||| ||||| || ||||| | || ||| || | || || Sbjct 183113 AAATTGTCGTGGCCGATACCGATGGAAGTCATTTACCTCCTCTGGAATATACATTGGGA- 183055 Query 27427 CGAAAACAACAAACCGTACGAATCGGGCA-CGGATCGCGTCGTCGCCGCGTACTTTGTCG 27485 ||||| || || |||| | || | || | | || || | || ||||| || | Sbjct 183054 -GAAAAAAATAAGCCGTTC-AAGCAAACATCTGGAAAAGTTGTGGGTGCCTACTTCGTAG 182997 Query 27486 AATGGGGTGTGTACGGCCGTAATTTTGCCGCGGACCGCGTACCGGCGCCCAACCTGTCAC 27545 |||||||||| || | || || ||| ||| || |||| || || || | | Sbjct 182996 AATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATACCTAATCTTACTC 182937 Query 27546 ATTTACTATACGGGTTCGTGCCGATATGCGGCGGCGACGGCATCAACGACAGCCTTAAAA 27605 |||| || ||||| || | || || |||||||| ||||||||||| || || | ||| Sbjct 182936 ATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGTGACGGCATCAATGATAGTTTAAAAG 182877 Query 27606 CTATTCCGGGTAGTTTCGAAGCGTTGCAAAAGTCGTGCGCGGGTCGTGAAAACTTTAAAG 27665 || || |||||| |||| | || ||| || || ||||| |||| |||| Sbjct 182876 AGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGTGAGGACTTCAAAG 182817 Query 27666 TGGCCATTCACGATCCGTGGGCTGCATTGCAAAAACCACAAAAAGGCGTTTCGGCTTGGA 27725 | | || |||||||| ||||| ||||| ||||||||||||||||| | || | |||| Sbjct 182816 TCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGA 182757 Query 27726 CGGAACAATACAAAGGTAATTTTGGACAGTTAATGGCGATAAAGCGTGCAAACCCGCATT 27785 || | |||||||| || ||||| || |||||| | |||| | || ||| | | Sbjct 182756 ACGAGCCTTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAAT 182697 Query 27786 TAAAAATTCTACCGTCCATAGGAGGGTGGACGCTGTCGGATCCATTTTACTTTT---TTC 27842 | || ||||| || || || || ||||||||||| | ||||| || | ||||| || Sbjct 182696 TGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTG 182637 Query 27843 ACGACGCT-GGCAAACGCGCCACATTCGTCGAATCGGTTCGCGAATTTCTGCAAACTTGG 27901 || | || | ||| || ||| || | || || || ||||| | ||| ||| Sbjct 182636 ACAAATCTAAGAGAACACG----ATTTGTGCAGTCAGTAAAGGAGTTTCTTCTAACATGG 182581 Query 27902 AAATTTTTCGACGGCGTGGACATCGATTGGGAATTTCCTGGCGGTAACGGCGCAAACCCA 27961 ||||| ||||| || || || ||||||||||| || ||||| || || || || |||| Sbjct 182580 AAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAAAGGTGCTAACC-- 182523 Query 27962 CTGTTAGGCGATCCCCAACGAGACGGT-TTAGTGTATGTGGTGTTGTTGCGCGAACTTCG 28020 ||| || | || | ||| ||| | || ||||| ||| || ||| | || Sbjct 182522 CTG-ACCTCGGTAGCCCAGAAGATGGTGATTGT-TATGTAAGTTTGATGAAAGAATTACG 182465 Query 28021 CGATATGCTCGATCAACTCGAACACCACACGGGCCGGCAATACGAACTGACAAGTGCAAT 28080 || |||||||| | ||| | | | || | |||||||| | || ||| || Sbjct 182464 TGAGATGCTCGACGAGCTCTCAGCTAAGAATGGTAAGAAATACGAATTAACTTCTGCTAT 182405 Query 28081 CGGCGCTGGCTACGACAAAATTGAGGTAGTTGATTACAACGAAGCGCAATCGTATTTGGA 28140 ||||||| | || ||||| | || || || || | | || ||| ||| |||| Sbjct 182404 TAGCGCTGGATGGGATAAAATCCAAGTTGTAGACTATGGCAAGGCTCAAAATTATATGGA 182345 Query 28141 CAAAATCTTTTTAATGAGTTATGATTTTAAAGGCGCTTGGTCCAACTCGGATTTGGGCCA 28200 | || || || |||||||| || || || || || ||||| || | | || || Sbjct 182344 TCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAATGACACTCTTGGACA 182285 Query 28201 TCAAACCGCTTTGTATGCGCCCGATTGGAAACCCGACGAGCGGTATACGACCGATTTTGC 28260 |||||| | ||||| ||||| | ||||| ||| | || || || | || || | Sbjct 182284 TCAAACGCCATTGTACGCGCCAGCGTGGAATCCCAAGGAAACTTACACATCTGACTTCGG 182225 Query 28261 GGTGCGCTCGTTGCTTCTTCAAAAAGTACGTTCCGAAAAAATCGTGATCGGTGTGGCAAT 28320 || | ||||| || ||| | | | || || || | ||||| || || Sbjct 182224 AGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTAT 182165 Query 28321 GTACGGTCGCGGTTGGAGTGGCGTATCGGAATATTTAAACGATAATCCCTTTACCGGCAT 28380 ||| ||||| ||||||| |||||| || || | || | | |||||| || |||| Sbjct 182164 GTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGACAACATTCCCTTCACAGGCAA 182105 Query 28381 CGCCACAGGCCCGGTGCCCGGCACTTGGGAAGACGGCGTCGTAGATTA 28428 ||| || || || || || |||||| ||||||| || || || || Sbjct 182104 CGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTGGTTGACTA 182057 >seq3424 Length=494560 Score = 145 bits (160), Expect = 8e-30 Identities = 162/214 (76%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || ||||| || | || |||||||| |||||||||||||| | | ||||| | ||| Sbjct 289050 AGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCT 288991 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| |||| || | ||||| || || |||||||| ||||| || Sbjct 288990 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCC 288931 Query 64352 TGTATTTTTTGCTTTA-CAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| |||||| || || | ||||||| | || ||||| | ||| | || Sbjct 288930 TGAATTTTC-GCTTTAACATTTTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGT 288872 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 |||||| |||| || |||||||||||||||||| Sbjct 288871 CTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 288838 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || ||||| ||||| || | | ||||| | |||||||||||||| || Sbjct 289491 GTTGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCA 289432 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| |||| || | ||||| || || ||||| || ||||| || || ||||| ||| Sbjct 289431 GCAAAAATAAGTCTTTGCTGATCTGGGGGAATACCCTCTTTATCCTGAATTTTCGCCTTA 289372 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||||| || |||||||| | ||| | |||||||| |||| || Sbjct 289371 ACATTTTCAATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTC 289312 Query 64427 TTTACGAAAATTTGCATT 64444 ||||| |||||||||||| Sbjct 289311 TTTACAAAAATTTGCATT 289294 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || ||||| ||||| || | | ||||| | ||| Sbjct 289734 AGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGATAGTGTGCGTCCATCT 289675 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| |||| || | ||||| || || ||||| || ||||| || Sbjct 289674 TCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGAATGCCCTCTTTATCC 289615 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| ||| || | ||||||| || |||||||| | || | ||| Sbjct 289614 TGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACTTCCAATGTGATAGTC 289555 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| |||| || ||||| || ||||||||| Sbjct 289554 TTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| || || || |||| || |||||||| || || || || |||| | |||||| | Sbjct 290650 TCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGATAATGTGCGCCC 290591 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || ||||| ||||| |||| || | || || || |||||||| ||||| || Sbjct 290590 ATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTT 290531 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 ||||| || ||| ||| ||| || | ||||||| || |||||||| | ||| | Sbjct 290530 ATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGAT 290471 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || || |||| || ||||| ||||||||||| Sbjct 290470 AGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435 Score = 116 bits (128), Expect = 4e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || ||||| || || || || || |||| || |||||| | ||||| | ||||| ||| Sbjct 288807 GTAGATTCCTTCTGGATATTATAGTCTGAGAGTGTGCGCCCATCTTCCAATTGCTTTCCG 288748 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || |||| || | || || || ||||| || ||||| || ||||| || ||| |||| Sbjct 288747 GCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTT 288688 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||||| || |||||||| | || | ||| || || || |||||| Sbjct 288687 ACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTT 288628 Query 64427 TTTACGAAAATTTGCAT 64443 |||||||| |||||||| Sbjct 288627 TTTACGAAGATTTGCAT 288611 Score = 102 bits (112), Expect = 8e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | || || || || || || || || || | | ||||| | ||||| Sbjct 290187 ACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCC 290128 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| ||||| |||| || | || || || |||||||| ||||| || ||||| Sbjct 290127 AGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 290068 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || ||| ||| ||| || | ||| ||| || |||||||| | || | || ||| Sbjct 290067 ATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATAGTTTTG 290008 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| || ||||||||||| Sbjct 290007 CCAGTCAATGTTTTCACAAAAATTTGCAT 289979 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 |||| ||| | || || || || || || || || || | | ||||| | ||||| Sbjct 290415 ACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCC 290356 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 || ||||| ||||| |||| || | || || || |||||||| ||||| || ||||| Sbjct 290355 AGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTTGA 290296 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 || ||| ||| ||| || | ||||||| || ||||| || | ||| | || || Sbjct 290295 ATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACCTCCAAAGTGATAGTTTTC 290236 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || |||| || ||||| |||||||||||| Sbjct 290235 CCAGTCAGTGTCTTTACAAAAATTTGCATT 290206 >seq3345 Length=207354 Score = 140 bits (154), Expect = 3e-28 Identities = 664/1051 (63%), Gaps = 25/1051 (2%) Strand=Plus/Minus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 || || || || || ||||| ||||||| | ||||| || |||| || || ||||| Sbjct 112987 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATT 112928 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 || | ||| | ||| || |||||||| |||||||| || ||| | | ||| Sbjct 112927 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCC 112868 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 || | ||| | || ||||| || |||||| || || || | | ||| || Sbjct 112867 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 112808 Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTTT-GCCAAGTCGCAACTGGC 154309 || ||||| | ||| | ||| | || ||| ||| || || || ||||| || Sbjct 112807 GCTGGACTCCCTTGATATGTGCTGTATGCACC-TTCTTTTTCAGCTAATTCACAACTAGC 112749 Query 154310 TTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTC 154369 |||||| || |||| || | ||||| ||||||| || | | | | ||||| || Sbjct 112748 TTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTC 112689 Query 154370 ACTTTCGTACGGCAATCCCAATATACAAAAA-GCATCGGCGAGCCCTTGAATGCCCACTC 154428 ||||||||| | | || || | ||| ||| ||||| || | || |||| || | | Sbjct 112688 ACTTTCGTAAGAAATTCTCATCA-ACACAAACGCATCTGCCATGCCCTGAACACCAATAC 112630 Query 154429 CAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATAT 154488 ||| ||||| ||| | | ||| || ||| || | | ||||||| |||| | || Sbjct 112629 CAATAGGTCTATGTCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACAT 112570 Query 154489 CGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGACAAAAT 154548 | |||| ||| |||| || ||||| Sbjct 112569 CAATAACTTTGTTTAAATTTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAAT 112510 Query 154549 CAAACACTCCGCTTTTAATAAAACGATTTACACAC-ACAGACGCCAAGTTGCAAACGGCA 154607 ||| || |||| | |||| ||| | | || || | |||||| || || Sbjct 112509 TAAAT-CTATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 112451 Query 154608 ATTTC---TTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATG 154664 | ||| ||| ||| | ||||||||||| || | ||| | ||| || ||| ||| Sbjct 112450 ACTTCATCTTCTGAAGT---GTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATA 112394 Query 154665 GTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGG 154724 ||||| || ||||| ||||| || |||| || || || || ||||| ||||| || Sbjct 112393 GTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGT 112334 Query 154725 GTGCCCGTTTCCACTTGGGTTTCAATAATTG--TGCGAAACAGACTTCGCGCCTCAACTT 154782 || || || || ||||||| ||| ||||||| | | | | | ||| | || |||| Sbjct 112333 GTACCAGTCTCTACTTGGGCTTCTATAATTGACTTCCATA-ACTCTT-GAGCTCTGACTT 112276 Query 154783 GACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAA---CTCTAAAC 154839 | ||||||| ||||| ||||||| | || |||| |||||| |||| | Sbjct 112275 GTTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAA 112216 Query 154840 TGTACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTTTT 154899 | | ||| | | || ||||| | |||||||| | ||| | ||| | | Sbjct 112215 AGCA---GTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCT 112159 Query 154900 GTTGTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCT 154959 || ||| | ||||||||||| ||| || | ||| || || || |||| || | || Sbjct 112158 TTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTC 112099 Query 154960 TTTTGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCC 155019 | | ||||| ||| |||| |||||||| ||| || ||| ||||||| || |||| Sbjct 112098 TCATTTCTTCCTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCC 112039 Query 155020 ACGGCTCTAAATATACGGCCATCGCGCCTTTGCGT---TTTCCTCCTTGATCCACGTGAC 155076 | ||||||||||| | || | || || ||| ||||| |||||||| || | | Sbjct 112038 AAGGCTCTAAATAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATC 111979 Query 155077 GCACACAATTATTGTACACGCGCAACAATGG 155107 || ||| || ||||| | ||||| ||| Sbjct 111978 TGGCAGTATTGTTATACACTCTCAACATTGG 111948 >seq1305 Length=286731 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | || |||||| ||||| | || ||||| |||||||||||||| || | Sbjct 24757 ACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGA 24816 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | ||||| || || || || ||| | || | || |||||||| || || Sbjct 24817 CAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 24876 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| ||||| |||||| || | ||||| ||| ||||| Sbjct 24877 AATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCAC 24936 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || | || | ||| || || || | || || ||||||||||||||| Sbjct 24937 CTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 24985 >seq2787 Length=76071 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | || |||| ||||| || || |||||||| |||||||| || | Sbjct 40646 ACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGA 40587 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| ||||||||||| ||| | || || || || || || || || Sbjct 40586 CAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGG 40527 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || ||||| ||||| || || ||||||| || | || ||| | ||||| Sbjct 40526 AATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 40467 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | ||||| |||||||| || | || || || || |||||||| Sbjct 40466 CTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419 Score = 113 bits (124), Expect = 5e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| || | || ||||||||||| |||||||| || | | || || | || Sbjct 40175 AAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGACAGTGTACGACCATC 40116 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||||| ||| |||| || || || || || |||||||| |||||||| || Sbjct 40115 TTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTC 40056 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 ||| | |||| ||||| ||| || | ||| ||| || || ||||||| ||| | | Sbjct 40055 TTGGA-TTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTG 39997 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 | || || || | ||||| || || |||||||| Sbjct 39996 TTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || |||||||||||||| || || || | | ||||| ||||||| | ||| Sbjct 39709 TGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCCAATTGC 39650 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || |||| | || || || || |||||||| ||||| || ||||| ||||| Sbjct 39649 TTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTG 39590 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 |||||| || | ||||| | || ||||| | ||| | ||| || || || Sbjct 39589 GCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGTA 39530 Query 64421 AAAGTTTTTACGAAAATTTGCATTTTAATA 64450 | ||||| || || || |||||||| ||| Sbjct 39529 AGTGTTTTCACAAAGATCTGCATTTTGATA 39500 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | || ||||||||||| ||||| || || | | ||||| | || Sbjct 41543 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATC 41484 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || | ||| || || ||| | ||||| ||||| ||||| || ||||| || || || || Sbjct 41483 CTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATC 41424 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| || || ||| ||| || | || || | ||||| || | ||| | ||| Sbjct 41423 TTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGT 41364 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || || | ||| || || || || ||||| Sbjct 41363 CTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 41331 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| ||||| ||||| || || ||||| || | | |||||| | ||||| || || Sbjct 41077 TGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCCAGTTGT 41018 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || || || || || || |||||||||||||| || ||||| | | || Sbjct 41017 TTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTG-AATCTT 40959 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| ||| || | || || | || ||||| | ||||| || || || || Sbjct 40958 AGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTTTCCAGT 40899 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 | ||||| || || ||||||||| Sbjct 40898 AAGTGTTTTGACAAATATTTGCATT 40874 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| ||||| ||||| || | | || ||| | || || ||||||||||| Sbjct 41299 GTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCCTCCAGCTGCTTGCCA 41240 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || ||||||| || || || || || ||||| || ||||| ||||| | | || ||||| Sbjct 41239 GCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGA-TCTTGGCTTT 41181 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 ||| || | || || || || ||||||| || | || || || |||| || Sbjct 41180 AACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTCAGTGT 41121 Query 64426 TTTTACGAAAATTTGCAT 64443 ||||| || || ||||| Sbjct 41120 CTTTACAAAGATCTGCAT 41103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499617887881960