Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_010956.1
Length=35083
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 412 8e-111
>seq3063
Length=7092
Score = 412 bits (456), Expect = 8e-111
Identities = 344/421 (82%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11027 GGTGACGGCCTACGAGCAGACGGTGAAGCAGGAGCGCAACTTCCAAAAGAGTTTCAACAA 11086
||| || || ||||||||||||||||| |||||| ||||| ||||| || || |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11087 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTGTGGGA 11146
|||||||||||| || | ||||||||||||||||| | || |||||||| ||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11147 CCTGGCGGAGGCCATCGTGCAGAACCCGGACAGCAAGCCTCTGACGGCGCAGCTGTTCCT 11206
| | | || | | ||| ||||| | |||||||| || | |||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11207 GGTGGTGCAGCACAGCAGGGACAACGAGGCGTTCAGGGAGGCACTGCTGAACATCGCCGA 11266
| |||||||||||||||||||||||||| |||||||| || ||||| ||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11267 GCCCGAGGGTCGCTGGCTGCTGGAGCTGATCAACATCTTGCAGAGCATCGTAGTGCAGGA 11326
||||||||| ||||||||||| || |||| ||||| |||||||||| || ||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11327 GCGCAGCCTGAGCTTGGCCGAGAAGGTGGCGGCGATCAACTACTCGGTGCTGAGCCTGGG 11386
||||||| ||||| |||| || |||||||| || || ||||| || |||| || |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11387 CAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAGGAGGTGAA 11446
|||||||||||| |||||||| ||| | || || ||||| ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11447 G 11447
|
Sbjct 7092 G 7092
Score = 145 bits (160), Expect = 2e-30
Identities = 275/404 (68%), Gaps = 27/404 (7%)
Strand=Plus/Plus
Query 15697 ATGTCAAAGCGCAAAATCAAGGAGGAGATGCTCCAGGTCGTCGCCCCGGAGATTTACGGA 15756
||||| |||||||||||||| || ||||||||||||||| |||| |||||||| || ||
Sbjct 618 ATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCGCGCCGGAGATCTATGGC 677
Query 15757 CCACCCCAGGCGGACCAG---------AAACCCCGCAAAATCAAGCGGGTTaaaaa---- 15803
|| || || ||| || || ||||| || | |||||||| |||||
Sbjct 678 CCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAAAGCGGGTCAAAAAGAAA 737
Query 15804 ---aaaG--GATGAGG-TGGAC--GAGGGGGCAGTAGAGTTTGTGCGCGAGTTCGCTCCG 15855
|||| ||||| | || || || | | || || | ||| || ||| ||
Sbjct 738 AAGAAAGATGATGATGATGAACTTGACGACGAGGTGGAACTGCTGCACGCAACCGCGCCC 797
Query 15856 CGGCGGCGCGTAAATTGGAAGGGGCGCAGGGTGCAGCGCGTGTTGCGGCCCGGCACGGCG 15915
||||||| ||| | ||||| || || | || || || ||||| |||||||| |
Sbjct 798 AGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGCACCACC 857
Query 15916 GTGGTGTTCACGCCCGGCGAGCGGTCCTCAGTCAGGAGCAAGCGTAGCTATGACGAGGTG 15975
|| || || |||||||| ||||| ||| | || |||||| ||||| ||||||
Sbjct 858 GTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGCGCGTGTATGATGAGGTG 917
Query 15976 TACGGCGACGACGACATCCTGGACCAGGCGGCGGAGCGGGCGGGCGAGTTCGCCTACGGG 16035
||||||||||| ||| | || || ||||| ||||| || ||||| ||||||||
Sbjct 918 TACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTACGGA 977
Query 16036 AAGCGGTCGCGCGAAGAGGAGCTGATCTCGCTGCCGCTGGACGA 16079
|||||| | |||| || | || |||||||||||||
Sbjct 978 AAGCGG------CATAAGGACATGTTGGCGTTGCCGCTGGACGA 1015
Score = 102 bits (112), Expect = 2e-17
Identities = 112/152 (74%), Gaps = 9/152 (6%)
Strand=Plus/Plus
Query 15131 CCCAGCACCATGTACGGAGGAGCCAAGAAGCGCTCCCAGCAGCACCCCGTCCGCGTCCNN 15190
|| |||| |||| || || || |||||||||||| | || ||||| || ||||| |
Sbjct 3 CCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGC 62
Query 15191 NNNCACTTCCGCGCTCCCTGGGGCGCTTACAAGCGCGGGCGGACTTCCACCGCCGTGCGC 15250
|||| |||||| ||||||||||| |||| ||||| || ||| | ||||
Sbjct 63 GGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACT---------GGGCGC 113
Query 15251 ACCACCGTCGACGACGTCATCGACTCGGTGGT 15282
||||||||||| |||| ||| ||| |||||||
Sbjct 114 ACCACCGTCGATGACGCCATTGACGCGGTGGT 145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 112138261661610
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |