Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_011202.1
Length=34794
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 244 2e-60
>seq3063
Length=7092
Score = 244 bits (270), Expect = 2e-60
Identities = 305/416 (73%), Gaps = 4/416 (1%)
Strand=Plus/Plus
Query 11079 GCTTACGAGCAGACAGTAAAGGAAGAGCGTAACTTCCAAAAGTCTTTTAATAATCATGTG 11138
|| ||||||||||| || || | ||| |||||| ||||| ||||| || || |||
Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738
Query 11139 CGAACCCTGATTGCCCGCGAAGAAGTTACCCTTGGTTTGATGCATTTGTGGGATTTGATG 11198
|| || || | || ||||| || || | | || |||||||| ||||||| || ||
Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTT--TG 6796
Query 11199 GAAGCTATCATT--CAGAACCCTACTAGCAAACCTCTGACCGCCCAGCTGTTTCTGGTGG 11256
|||| | || ||||| | |||||| || || | || |||||||| || | |
Sbjct 6797 TAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAG 6856
Query 11257 TGCAACACAGCAGAGACAATGAGGCTTTCAGAGAGGCGCTGCTGAACATCACCGAACCCG 11316
|||| |||||||| ||||| ||||| ||||| || |||||||| ||||| || ||||
Sbjct 6857 TGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCG 6916
Query 11317 AGGGGAGATGGTTGTATGATCTTATCAACATTCTACAGAGTATCATAGTGCAGGAGCGGA 11376
|||| | ||| || ||| | || |||||||| ||||| || | ||||||||||| |
Sbjct 6917 AGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCA 6976
Query 11377 GCCTGGGCCTGGCCGAGAAGGTGGCTGCCATCAATTACTCGGTTTTGAGCTTGGGAAAAT 11436
|| || ||||||| || |||||||| ||||| || || || | | || |||| || |
Sbjct 6977 GCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGT 7036
Query 11437 ATTACGCTCGCAAAATCTACAAGACTCCATACGTTCCCATAGACAAGGAGGTGAAG 11492
|||||| ||||| || ||| | || || ||||||||||||||||||||||| |||
Sbjct 7037 TTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 161 bits (178), Expect = 2e-35
Identities = 633/987 (64%), Gaps = 65/987 (7%)
Strand=Plus/Plus
Query 15430 CCAAGCAAGATGTACGGAGGCGCACGCAAACGTTCTACCCAACATCCTGTCCGTGTTCGC 15489
||||||||||||| || || ||| || || || |||||| || || || || |||
Sbjct 3 CCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGC 62
Query 15490 GGACATTTTCGCGCTCCATGGGGCGCCCTCAA---GGGCCGCACTCGCGTTCGAACCACC 15546
|| || | ||||| || |||||||| | ||| ||||||||| | || ||||||
Sbjct 63 GGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACT---GGGCGCACCACC 119
Query 15547 GTCGATGATGTAATCGATCAGGTGGTTGCCGACGCCCGTAATTATACTCCTACTGCGCCT 15606
|||||||| | || || |||||| | || || || || || || || || ||||
Sbjct 120 GTCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCA 179
Query 15607 ACA---TCTACTGTGGATGCAGTTATTGACAGTGTAGTG-GCTGACGCTCGCAACTATGC 15662
|| || || ||||| || | ||| | | || ||| || || || || |||||
Sbjct 180 CCAGTGTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGA-GCCCGGCGTTATGC 238
Query 15663 TCGACGTAAGAGCCGGCGAAGGCGCATTGCCAGACGCCA------CCGAGCTACCACT-- 15714
| | ||||| ||||| |||||| | || | ||||| |||| | ||||
Sbjct 239 TAAAATGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGCACTGC 298
Query 15715 -GCCATGCGAGCCGCAAGAGCTCTGCTACGAAGAGCTAGACGCGTGGGGCGAAG---AGC 15770
||| || || || || ||||| | || | ||| || ||| | ||
Sbjct 299 CGCCCAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCGGC 358
Query 15771 CATGCTTAGGGCGGCCAGACGTGCAGCTTCGGG---CGCCAGCG---CCGGCAGGTCCCG 15824
||||| |||| || || | || |||| | || | || ||||||| |
Sbjct 359 CATGC---GGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCCCAGGTCCAG 415
Query 15825 CAGGCAAGCAGCCGCTGTCGCAGCGGCGACTATTGCCGACATGGCCCAATCGCGAAGAGG 15884
| | ||| ||||| | ||||| ||| | ||| | ||| | || || || ||
Sbjct 416 GCGACGAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGG 475
Query 15885 CAATGTATACTGGGTGCGTGACGCTGCCACCGGTCAACGTGTACCCGTGCGCACCCGTCC 15944
||| || ||||||||||| ||| | | ||| | || || |||||||||||||| ||
Sbjct 476 CAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCC 535
Query 15945 CCCTCGC-ACT-------TAGAAGATACTGAGCAGTCTCCGA-TGTTGTGT---CCCAGC 15992
||| ||| ||| |||| | ||| || ||| | |||||| | |||||
Sbjct 536 CCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCAGC 595
Query 15993 GGCG--------------AG-GATGTCCAAGCGCAAATACAAGGAAGAAATGCTGCAGGT 16037
|||| || ||||||||||||||| ||| ||||| ||||| |||||
Sbjct 596 GGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGT 655
Query 16038 TATCGCACCTGAAGTCTACGGCCAACCGTTGAAGG------ATGaaaaaaaaccccgcaa 16091
||||| || || |||| |||| ||| ||||| | || | || ||||| ||
Sbjct 656 CATCGCGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAA 715
Query 16092 aatcaagcgggttaaaaaggacaaaaaaGAAGAGGAAGATGGCGATGATGGGCTGGCGGA 16151
| |||||||| |||||| | || ||||| || || |||| ||| | || |||
Sbjct 716 GCTAAAGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAGGTGGA 775
Query 16152 GTTTGTGCGCGAGTTTGCCCCACGGCGACGCGTGCAATGGCGTGGGCGCAAAGTTCGACA 16211
| ||| || || || |||| || || || ||| || || || |||
Sbjct 776 ACTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACG 835
Query 16212 TGTGTTGAGACCTGGAACTTCGGTGGTCTTTACACCCGGCGAGCGTTCAAGCGCTACTTT 16271
||| ||| |||| || || | || || ||||| ||||| ||||| || | | || |
Sbjct 836 TGTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTA 895
Query 16272 TAAGCGTTCCTATGATGAGGTGTACGGGGATGATGATATTCTTGAGCAGGCGGCTGACCG 16331
||||| ||||||||||||||||| || || || | ||||||||||| || ||
Sbjct 896 CAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCG 955
Query 16332 ATTAGGCGAGTTTGCTTATGGCAAGCG 16358
| || |||||||| || || |||||
Sbjct 956 CCTCGGGGAGTTTGCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111213508983048
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