Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_011203.1
Length=35343
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 288 2e-73
>seq3063
Length=7092
Score = 288 bits (318), Expect = 2e-73
Identities = 312/414 (75%), Gaps = 0/414 (0%)
Strand=Plus/Plus
Query 11298 GCCTACGAGCAGACCGTGAAGGAGGAGCGCAACTTCCAAAAATCTTTTAACAACCATGTG 11357
|| ||||||||||| ||||| ||||| ||||| |||||| ||||||||||| |||
Sbjct 6679 GCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCACGTG 6738
Query 11358 CGCACCCTGATCGCCCGCGAGGAAGTGACCCTGGGTCTGATGCATCTGTGGGACCTGATG 11417
||||| || | || |||||||| ||| | | || |||||||||||||||||| | |
Sbjct 6739 CGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTTTGTA 6798
Query 11418 GAGGCTATCGCCCAAAACCCCACTAGCAAACCACTGACAGCTCAGCTGTTTCTGGTGGTT 11477
|| | | |||||||| | |||||| || || | || |||||||| || | ||
Sbjct 6799 AGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGTG 6858
Query 11478 CAACATAGCAGGGACAACGAGGCATTCAGGGAGGCGTTGTTGAACATCACCGAGCCTGAT 11537
|| || |||||||||||||||||||||||||| ||| || | ||||| ||||| ||
Sbjct 6859 CAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCCGAG 6918
Query 11538 GGGAGATGGCTGTATGATCTGATCAACATCCTGCAAAGTATTATAGTGCAGGAACGTAGC 11597
|| | |||||| ||| |||| ||||| ||||| || || | |||||||| || |||
Sbjct 6919 GGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGCAGC 6978
Query 11598 CTGGGTTTGGCTGAGAAAGTGGCAGCTATCAACTACTCGGTCTTGAGCCTGGGCAAATAC 11657
|| | ||||||| || ||||| || || ||||| || | | || |||||||| |
Sbjct 6979 TTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAAGTTT 7038
Query 11658 TACGCTCGCAAGATCTACAAGACCCCCTACGTACCCATAGACAAGGAGGTGAAG 11711
||||| |||||||| ||| | ||||| ||||| ||||||||||||||||| |||
Sbjct 7039 TACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 178 bits (196), Expect = 3e-40
Identities = 634/992 (64%), Gaps = 88/992 (9%)
Strand=Plus/Plus
Query 15607 CAAGATGTATGGAGGCGCCCGCAAGCGCTCTACCCAGCATCCTGTGCGCGTTCGCGGTCA 15666
|||||||| ||| || || |||||||| ||| || || |||||||| ||||| ||
Sbjct 8 CAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCA 67
Query 15667 TTTCCGCGCTCCCTGGGGCGCACTCAAGGGTCGTACCCGCACTCGG---ACCACGGTCGA 15723
| |||||| ||||||||||| | ||| | | ||||||| || ||||| |||||
Sbjct 68 CTACCGCGCGCCCTGGGGCGCGCACAAACGCGG---CCGCACTGGGCGCACCACCGTCGA 124
Query 15724 TGATGTGATCGACCAGGTGGTCGCCGATGCTCGTAATTATACTCCTACTGCGCCTACA-- 15781
||| | || ||| |||||| | || || || || || || || || |||| ||
Sbjct 125 TGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCACCAGT 184
Query 15782 -TCTACTGTGGATGCAGTTATTGACAGTGTGGTG-GCAGACGCCCGCGCCTATGCTCGCC 15839
|| || ||||| || | ||| | | |||||| || || || ||| ||||||
Sbjct 185 GTCCACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCGGCGT-TATGCTAAAA 243
Query 15840 GGAAGAGCCGAAGGAGGCGCATCGCCAGGCGCCACAG----------GGCTACTCCCGCC 15889
|||||| || |||||||| | || | |||||| | ||| ||| |||||
Sbjct 244 TGAAGAGACGGCGGAGGCGCGTAGCACGTCGCCACCGCCGCCGACCCGGC-ACTGCCGCC 302
Query 15890 ATGCGAGCCGCAAAAGCTATTCT-----GCGGAGGGCCAAACGTGTG--GGGCGAAGAGC 15942
|| || || || | || ||| | | | | || | ||||| ||
Sbjct 303 CAACGCGCGGCGGCGGCCCTGCTTAACCGCGCACGTCGCACCGGCCGACGGGCG----GC 358
Query 15943 CATGCTTAGAGCGGCCAGACG------CGCGGCT----TCAG-GTGCCAGCAGCGGCAGG 15991
||||| | || || || | ||||| | ||| ||||| | ||||
Sbjct 359 CATGC---GGGCCGCTCGAAGGCTGGCCGCGGGTATTGTCACTGTGCCCCC-----CAGG 410
Query 15992 TCCCGCAGGCGCGCGGCCACGGCGGCAGCAGCGGCCATTGCCAACATGGCCCAACCGCGA 16051
||| | | || |||||| | || ||||| ||||||||| ||| | || ||
Sbjct 411 TCCAGGCGACGAGCGGCCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGC 470
Query 16052 AGAGGCAATGTGTACTGGGTGCGTGATGCCACTACCGGCCAGCGCGTGCCCGTGCGCACC 16111
|| ||||| |||||||||||||| || | ||||| |||||||||||||||||||
Sbjct 471 AGGGGCAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACC 530
Query 16112 CGCCCCCCTCGCACTTAGA--------AGATACTGAGCAGTCTCCGA-TGTTGTGTC--- 16159
|||||||| |||| |||| | | ||| || ||| | |||||| |
Sbjct 531 CGCCCCCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTAT 590
Query 16160 CCAGCGGC--------------AAG-TATGTCCAAGCGCAAATACAAGGAAGAGATGCTC 16204
|||||||| ||| |||||||||||||||| ||| ||||||||||||
Sbjct 591 CCAGCGGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTC 650
Query 16205 CAGGTCATCGCGCCTGAAATCTACGGTCCGCCGGTGAAGG------ATGaaaaaaaGCCC 16258
|||||||||||||| || ||||| || || ||| ||||| | || | ||||||
Sbjct 651 CAGGTCATCGCGCCGGAGATCTATGGCCCCCCGAAGAAGGAAGAGCAGGATTACAAGCCC 710
Query 16259 CGCAAAATCAAGCGGGTCAAAA--ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGC-TG 16315
|| || | ||||||||||||| | | | |
Sbjct 711 CGAAAGCTAAAGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAG 770
Query 16316 GTGGAGTTTGTGCGCGAGTTCGCCCCAAGACGGCGCGTGCAGTGGCGCGGGCGCAAAGTG 16375
||||| | ||| || ||| || || ||||| || |||||| || || ||
Sbjct 771 GTGGAACTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTA 830
Query 16376 CGTCAAGTGCTCAGACCCGGGACCACTGTGGTTTTTACACCTGGCGAGCGTTCCAGCACT 16435
| | || | ||||||| ||||| || |||||||| || || ||||| |||| |
Sbjct 831 AGACGTGTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGC 890
Query 16436 ACTTTTAAACGGTCCTATGATGAGGTGTACGGGGATGACGATATTCTTGAGCAGGCGGCA 16495
|| | || || ||||||||||||||||| || || || | |||||||||||
Sbjct 891 ACCTACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAAC 950
Query 16496 GACCGCCTTGACGAGTTTGCTTATGGCAAGCG 16527
|| ||||| | |||||||| || || |||||
Sbjct 951 GAGCGCCTCGGGGAGTTTGCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 112970219088690
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