Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 156 3e-33
seq1305 123 2e-23
seq3424 109 4e-19
>seq2787
Length=76071
Score = 156 bits (172), Expect = 3e-33
Identities = 168/221 (76%), Gaps = 1/221 (0%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024
|| || || ||||| ||||| |||||||| || || || || ||| | | |||||
Sbjct 39718 AATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCT 39659
Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084
|| ||||| || |||||| | |||||||| ||||| || ||||| |||||||||||
Sbjct 39658 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 39599
Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144
||||||| ||||||| |||| ||||||||| | ||| || || || |||||||||
Sbjct 39598 TGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTT 39539
Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185
||||| || || ||||| ||||| || ||||| ||||| ||
Sbjct 39538 TTACCCGTAAGTGTTTTCACAAAGATCTGCAT-TTTGATAT 39499
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||||| | | |||| |||||||||||| || || || |||||||| ||
Sbjct 40417 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 40358
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||| ||||| || ||||| | || | |||||| || || |||
Sbjct 40357 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 40298
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || ||||| ||||| ||||||| |||| |||||||| ||| ||
Sbjct 40297 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 40238
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | ||||||||| || || || || ||||| |||||||| ||||||
Sbjct 40237 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATA 40190
Score = 109 bits (120), Expect = 4e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| || | | ||||| || | ||||| |||||||| |||||||| ||
Sbjct 40189 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 40130
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||||||||| ||||| || | || | ||| ||||| || |||
Sbjct 40129 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 40070
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| ||||| ||||| ||||| ||| ||| |||| || || || | ||| ||
Sbjct 40069 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 40010
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
||||| ||||| ||||| || || || ||||| ||||| |||||||||
Sbjct 40009 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCATA 39962
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||||| | | ||||||||||||||||| |||||||| |||||||| ||
Sbjct 40645 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 40586
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
|| | | | ||||||| || |||||||| | || | ||| ||||| || |||
Sbjct 40585 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 40526
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || || || ||| || |||||| |||| || || || || ||
Sbjct 40525 ATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACC 40466
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| | || || || || ||||| || || || ||||| |||||||||
Sbjct 40465 TCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCATA 40418
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|||||||| | ||||| |||||||| ||||| || || ||| | | | || |||
Sbjct 41539 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCT 41480
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
|| ||||| ||||| | || | |||||||||||| ||||| || ||||| ||
Sbjct 41479 AACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGG 41420
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || || ||| |||| ||||| ||| || || || || || ||||| ||
Sbjct 41419 ATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTC 41360
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|| || ||||| || ||||| || ||||||
Sbjct 41359 CCAGTAAGAGTCTTAACAAAGATCTGCATA 41330
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027
|| || |||||||| || ||||| || || ||||| || || | | | |||||
Sbjct 41083 ACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAGACAGGGTGCGGCCATCTTCC 41024
Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087
| |||||| |||||| | || | ||| ||||| || |||||||||||||| || |
Sbjct 41023 AGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCCTTATCTTGA 40964
Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147
|| || ||| ||| |||| || || || || || || || || || |||||
Sbjct 40963 ATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAACTTCCAAAGTTATTGTTTTT 40904
Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || ||||| ||||| ||||||||
Sbjct 40903 CCAGTAAGTGTTTTGACAAATATTTGCAT 40875
>seq1305
Length=286731
Score = 123 bits (136), Expect = 2e-23
Identities = 148/199 (74%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGTCTTCTAATTGTTTGC 15037
|| || || ||||| |||||||| || || ||| || | ||||||| |||||| |
Sbjct 24788 GTGGATTCCTTTTGAATGTTGTAGTCA--GACAATGTACGTCCATCTTCTAGTTGTTTAC 24845
Query 15038 CAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTT 15097
|||| | |||||||| || ||||| |||||| |||||||| || ||||| ||
Sbjct 24846 CAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTT 24905
Query 15098 TTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAG 15157
||||| |||||||||||||| || || || | ||||||||||||||| || || |
Sbjct 24906 TTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGG 24965
Query 15158 TTTTTACAAAAATTTGCAT 15176
| || || |||||||||||
Sbjct 24966 TCTTGACGAAAATTTGCAT 24984
>seq3424
Length=494560
Score = 109 bits (120), Expect = 4e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||||| | ||| | ||| | ||||||||||| ||||| || || || || || ||
Sbjct 290661 CCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTC--TG 290604
Query 15010 AGAATTCTCGCG--TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067
| ||| ||| ||||| | ||| || || ||| | |||| | ||||| || |
Sbjct 290603 ATAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 290544
Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126
|||| |||||||| || ||| ||||| || ||| ||||||| ||||| | |||
Sbjct 290543 GAATGCCTTCCTTATCTTGAATCTTTGCCTTA-ACATTTTCTATTGTATCAGAAGCTTCC 290485
Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|| || || || || ||||| || ||||| || |||||||||||||||||
Sbjct 290484 ACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435
Score = 100 bits (110), Expect = 2e-16
Identities = 164/232 (71%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007
||||||||| | | ||||||||||| | ||||| || || || || || || ||
Sbjct 290435 TGCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC- 290377
Query 15008 TGAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTT 15065
|| ||| || | ||||| | ||| || || ||| | |||| | ||||| ||
Sbjct 290376 -GACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGG 290318
Query 15066 TGGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTT 15124
||||| |||||||| || ||| ||||| || ||| ||||||| ||||| | ||
Sbjct 290317 AGGAATGCCTTCCTTATCTTGAATCTTTGCCTTA-ACATTTTCTATTGTATCAGAAGCTT 290259
Query 15125 CTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
| || || || || || ||||| || ||||| || |||||||||||||||||
Sbjct 290258 CCACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290207
Score = 96.9 bits (106), Expect = 2e-15
Identities = 153/215 (71%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CGT 15022
||||||||||| | ||||| || || || || || || || || ||| || | |
Sbjct 290190 AAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC--GACAATGTGCGTCCAT 290133
Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082
|||| | ||| || || ||| | |||| | ||||| || ||||| ||||||||||
Sbjct 290132 CTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGT 290073
Query 15083 CACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141
| ||| ||||| || ||| ||||||| || || | || || || ||||||||
Sbjct 290072 CTTGAATCTTTGCCTTA-ACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATA 290014
Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
||||| || |||| ||||| ||||||||||||||
Sbjct 290013 GTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023
||||||||| || | ||||| || || || || || || || ||| | | | | ||
Sbjct 288823 TAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAGAGTGTGCGCCCATC 288764
Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083
||| ||||| || || ||| | || | | ||||| || || || |||||||||||
Sbjct 288763 TTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTC 288704
Query 15084 ACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142
||| ||||| ||||| |||| || ||||| | ||| || || || || ||||
Sbjct 288703 TTGAATCTTTGC-CTTTACGTTTTCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGG 288645
Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176
|||| || || | ||||||||| || ||||||||
Sbjct 288644 TTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357373231224065
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