Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 264 1e-65
seq3345 230 2e-55
seq3424 131 2e-25
seq1305 127 2e-24
seq2787 118 1e-21
>seq3463
Length=282612
Score = 264 bits (292), Expect = 1e-65
Identities = 606/897 (68%), Gaps = 29/897 (3%)
Strand=Plus/Plus
Query 50157 TAATCAACTACGCCGTCTTCCCAAGTGCCTGCCGCCGGGCCGGTGGCGATTCCCGTAAAC 50216
|| ||||| || ||||||| |||||| ||| | || || || ||| | || || ||
Sbjct 182057 TAGTCAACCACTCCGTCTTGCCAAGTTCCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 182116
Query 50217 GGATTGTCGTCTTTGTAGCCGGTCACGCCGCGCCAACCCCTGCCGTACATGGCCACGCCT 50276
||| ||| ||||||||| | ||||| |||||| | || ||||| || || |||
Sbjct 182117 GGAATGTTGTCTTTGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCT 182176
Query 50277 ACGATTATTTTGCTCGGCTGCACGTTTTGATCGAG-AAGAACGTTTACCGCAAAATCGGT 50335
|| | || || | || | ||| || | || ||| | ||||| | || || |
Sbjct 182177 ACTACAATCTTCTTAGGATTCACTCCCTGCGCCAGCAAGTAT-TTTACTCCGAAGTCAGA 182235
Query 50336 CGTGTACTTTTCGTCGGTGTTCCATGCGGGCGCATACAAAGGCGTCTGATGTCCCAAATC 50395
||||| |||| | || ||||| || ||||| ||||| ||||| |||||||| | |
Sbjct 182236 TGTGTAAGTTTCCTTGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAGT 182295
Query 50396 GACGGTGGACCAAGCGCCTTTAAAATCGTAACTCATTAAAAATATTTTATCTAAATAATT 50455
| | | ||||| || || || || ||||||||||| || || || | ||| | ||||||
Sbjct 182296 GTCATTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATT 182355
Query 50456 TTGAGCGTCGCCGTAATTGACAAGGGCGATTTTATCGTAACCTGCGCTAACGGCGCTCGT 50515
|||||| | ||| || | |||| ||||||||| | || ||||||| || ||
Sbjct 182356 TTGAGCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGT 182415
Query 50516 CAATTCGAATTCGCGGCCGGTGACGCGTTGA-AGATCGTCCAGCATGTCGCGCAGATCGC 50574
|||||| ||| || | | ||| || ||||| ||||| || || | ||
Sbjct 182416 TAATTCGTATTTCTTACCATTCTTA-GCTGAGAGCTCGTCGAGCATCTCACGTAATTCTT 182474
Query 50575 GAAGCAGCACAACGTACGTGAGT----CCGTCTTTGTGAGGATCGCCGACTGCGGGATTG 50630
| || ||| ||| | | || |||| || || | |||| | || ||
Sbjct 182475 TCATCA----AACTTACATAACAATCACCATCTTC-TG-GGCTA-CCGAGGTCAGGGTTA 182527
Query 50631 GCGCCGTTGCCGCCGGGAAACTCCCAATCGATGTCGACGCCGTCGAAAAACTTCCAAGTC 50690
|| || ||||| || || |||||||||||||| || || || ||||| || ||||| ||
Sbjct 182528 GCACCTTTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTT 182587
Query 50691 AGCAGAAACTCGCGTACCGATTCCACAAAAACGGCTCGTTTT-TCCGCGTCGTG-CATGT 50748
|| |||||||| ||| || | |||||| |||| || || | || || |
Sbjct 182588 AGAAGAAACTCCTTTACTGACTGCACAAA------TCGTGTTCTCTTAGATTTGTCAACT 182641
Query 50749 GAAAA----AATGGATCGGACAACGTCCATCCGCCTATAGACGGTAACACCTTGAGGTGC 50804
|||| || ||||||| | |||||| || || ||||| || | | ||| | |
Sbjct 182642 AAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCA 182701
Query 50805 GGGTTGGCtttttttATCGCCATCAGTTGACCGAAATTTCCTTTGTACGGTTCGTTCCAA 50864
||| ||||| ||||| | ||| | ||| || || || |||||||| || ||||||||
Sbjct 182702 GGGCGGGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCAT 182761
Query 50865 GCCGAGACGCCCTTTTGTGGTTTCTGTACCGCAGCCCACGGGTCGTGAATGGACACTTTA 50924
| || | || ||||||||||| |||| || ||||| || ||||| || || |||||
Sbjct 182762 GAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTG 182821
Query 50925 AAATCGGCTCGGCCGGCGCACGAACGCTGCAGCGCCTCGAAACTGCCCGTGA-CGGTTTT 50983
|| || | |||||| || || ||||| || || | ||||||||| || | ||||
Sbjct 182822 AAGTCCTCACGGCCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTT 182881
Query 50984 CAACGCGTCGTTGACGCCTTCGCCGCCGCAAATCGGCACGAAACCGTACAGCAAATG 51040
||| || |||| ||| || ||||||||||| || | || ||||| ||||||||
Sbjct 182882 AAAC-TATCATTGATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATG 182937
>seq3345
Length=207354
Score = 230 bits (254), Expect = 2e-55
Identities = 882/1381 (64%), Gaps = 8/1381 (1%)
Strand=Plus/Plus
Query 123303 GCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAAC 123362
||||| ||| |||| || ||||| | || | | || || || ||||||| |||
Sbjct 112020 GCGATTTATTTAGAGCCTTGGCATGCAGACATATTTGAATTCTTGGATTTAAAGAAGAAC 112079
Query 123363 ATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTG 123422
| ||| |||||||| || ||| | || |||| || || |||||| |||| ||| ||
Sbjct 112080 ACGGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCCTTATGGATACCAGATCTG 112139
Query 123423 TTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCC 123482
|||||| | | ||| || | || | || ||| ||||||||||| || |||||
Sbjct 112140 TTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCATGATTGTCCT 112199
Query 123483 GGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAA 123542
||| | ||| | || | | ||||| || | || || |||| || |||
Sbjct 112200 GGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATGCCAAATATGAA---GAA 112256
Query 123543 GGCAAACAGGTTAGT---CAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACA 123599
| |||| ||| || || || | || || | || | ||||| ||| |
Sbjct 112257 GAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATAGAAGCC 112316
Query 123600 CAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAAT 123659
||||| || || || || || |||||| | || || || || || ||||| || | |||
Sbjct 112317 CAAGTAGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAGAGTAAT 112376
Query 123660 CAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGC 123719
|| | || | || || || |||||||| ||||||||| | || || | ||||||
Sbjct 112377 CAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACT 112436
Query 123720 GATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAA 123779
| ||| ||||||| ||||| || | ||||| || | || | || |||
Sbjct 112437 TCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGTTGAA 112496
Query 123780 AACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTG 123839
|| |||||||| ||| | ||| || ||||| | |||| | |||||
Sbjct 112497 AATAATAGATTTAATTTTAAAAAATTAAAAGAAATCACAAAGATTGTAACTCAAAATTTA 112556
Query 123840 AACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAA 123899
|||||| |||| |||||||||||||||||| | ||||| || ||| ||| |
Sbjct 112557 AACAAAGTTATTGATGTTAATTTTTATCCTGTCCCTGAAGCAAAAACTTCAAATATGAGA 112616
Query 123900 CACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATG 123959
|| ||||| | || | || |||| || |||| || |||||||| || || | ||
Sbjct 112617 CATAGACCTATTGGTATTGGTGTTCAGGGCATGGCAGATGCGTTTGTGTTGATGAGAATT 112676
Query 123960 CCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTAC 124019
| |||||||| || |||||| | || ||| |||||| ||||||||||||||
Sbjct 112677 TCTTACGAAAGTGAGAAAGCAATACTTCTCAATCAACAAATATTTGAAACAATTTATTAT 112736
Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079
|| || || || || || || ||| | || ||| | || || ||| | ||
Sbjct 112737 GGTGCATTAGAAGCTAGTTGTGAATTAGCTGAAAAAGAAGGTGCATACAGCACATATCAA 112796
Query 124080 GGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139
|| || || || |||| |||||| | ||||| || |||||| | || || ||| |
Sbjct 112797 GGGAGTCCAGCAAGCCAAGGTATCCTCCAGTATGATATGTGGGACAAAACTCCTACAGAC 112856
Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTG 124199
| ||||||||| | | ||| || ||| | | || |||||||| || || ||
Sbjct 112857 CTTTGGGACTGGGCTGCCCTCAAAGAAAAGATAGCAAAACATGGTTTGCGCAATTCTCTA 112916
Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259
||| | || |||||||| || | ||||| |||||| | || |||| ||||| ||
Sbjct 112917 TTGATAGCTCCAATGCCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCTTTT 112976
Query 124260 GAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATA 124319
|| || || || ||| | ||| || |||| ||| | || || |||| || |
Sbjct 112977 GAACCCTTTACATCAAATATTTACCAAAGAAGAGTCTTATCTGGAGAATTTCCTGTAGTG 113036
Query 124320 AATCATCATTTGGTGGACGACTTG-GTGGCGTTAAATTTGTACGATGAAAACATGCGCAA 124378
|| |||||| | || || ||| | | | | |||||| |||||| | ||| ||
Sbjct 113037 AACCATCATCTTCTGACTGATTTGACTCGGGCT-GATTTGTGGGATGAAGATATGAAAAA 113095
Query 124379 CGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAACACGTCAA 124438
||||| | ||| | || || | ||||| || | | |
Sbjct 113096 TCTTATTATATACAACAATGGATCTATACAAGAAATTGAAAAAATTCCTAAAGAAATAAG 113155
Query 124439 GCAACTGTACAAAACCGTGTGGGAAATGAAAAATAAACGATTAATTGAAATGGCCGTCGA 124498
| ||||||||||||| ||||| || | ||| || || | ||||| | ||
Sbjct 113156 AGATTTGTACAAAACCGTATGGGAGATTTCACTGAAAACATCCATACAGATGGCAGCTGA 113215
Query 124499 CCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAACCCACCTA 124558
|||| || | | || |||||||||||||||||| | ||| || |||| | |||
Sbjct 113216 TAGAGGAGCTTTTATAGACCAAAGTCAATCTTTTAACATACATGTTGCTAAACCTAACTA 113275
Query 124559 CGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGCGGACTCAAAACGGGCATGTA 124618
| | || || || | ||||| |||| | || | ||||| || |||||
Sbjct 113276 TGGAAAACTTACGTCGATTCATTTCCACGCTTGGAAAATGGGTTTAAAAACAGGAATGTA 113335
Query 124619 TTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAAATCTAAACT 124678
|||||| | || ||||| || || |||| ||||| ||||| || |||||| |||| |
Sbjct 113336 CTACTTACGCACAAAACCAGCAGCAAATGCTATTCAGTTTACTGTAGACAAAGGTAAAAT 113395
Query 124679 A 124679
|
Sbjct 113396 A 113396
>seq3424
Length=494560
Score = 131 bits (144), Expect = 2e-25
Identities = 170/233 (73%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | || | ||| |||| ||||| || || ||||| ||||||||||| ||
Sbjct 290208 ATTCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC 290149
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| | | | ||| |||| ||| ||||| ||| | |||| || ||| || || |
Sbjct 290148 --GACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTG 290091
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| ||||||||||| || |||||||| ||| || | ||||| ||||| |||| ||
Sbjct 290090 GAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCT 290031
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
| ||||| | |||| |||||||| || | ||||| |||||||||||||||
Sbjct 290030 CCACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCATC 289978
Score = 129 bits (142), Expect = 5e-25
Identities = 169/232 (73%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | || | || ||| | |||| || ||||||||||| |||||||||||
Sbjct 289296 ATTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATC- 289238
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|||| || | | ||| |||| ||||||||||| | || | | || ||||| |
Sbjct 289237 -TGACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAG 289179
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| |||||||||||||| |||||||||||| || | ||||| || || |||| ||
Sbjct 289178 GAGGAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCT 289119
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | || | |||||||| || || || |||||||| ||||||||
Sbjct 289118 CCACTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067
Score = 116 bits (128), Expect = 3e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--A 45185
||| |||| ||||| || || ||||| ||||||||||| || ||| | | | |
Sbjct 290419 CAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCC--GACAATGTGCGTCCA 290362
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| ||||| ||| | |||| || ||| || || || ||||||||||| |||
Sbjct 290361 TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTA 290302
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| ||| || | ||||| || || |||| || || || | ||| |
Sbjct 290301 TCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACCTCCAAAGTGATA 290242
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || || || |||||||||||||||||
Sbjct 290241 GTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290207
Score = 114 bits (126), Expect = 1e-20
Identities = 153/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189
|| || || || || ||||| || ||||||||||| || ||| | | | ||| |
Sbjct 290643 ACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTC--TGATAATGTGCGCCCATCTT 290586
Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249
||| ||| ||||| ||| | |||| || ||| || || || ||||||||||| |||||||
Sbjct 290585 CCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTT 290526
Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
|||| ||| || | ||||| || || |||| || ||||| | ||| | ||||
Sbjct 290525 GAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTT 290466
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| || || || || |||||||||||||||||
Sbjct 290465 TCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435
Score = 107 bits (118), Expect = 2e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | || | || |||| |||| || |||||||| ||||||||||| |
Sbjct 288840 ATTCCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGT-- 288783
Query 45171 CTGACGGTTTTAG--AATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|||| || | | ||| |||||||| ||||| ||| | || | || ||| || || |
Sbjct 288782 CTGAGAGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTG 288723
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| || |||||||| || |||||||| ||| || | ||| | || || |||| |
Sbjct 288722 GAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTT 288663
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | || | ||||| || |||| ||||||||| || ||||||||
Sbjct 288662 CCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611
Score = 93.3 bits (102), Expect = 4e-14
Identities = 161/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | |||| || || || |||| ||||||||||| || ||||| || ||
Sbjct 289524 ATTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCA 289465
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|| || | | ||| || | || ||||| || | || | || |||||| || |
Sbjct 289464 --GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 289407
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| ||||| || |||||||| |||||||| || | ||| | || || |||| |
Sbjct 289406 GGGGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTT 289347
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | ||| | || ||||| || || || |||||||||||||||||
Sbjct 289346 CCACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 289295
Score = 89.7 bits (98), Expect = 5e-13
Identities = 160/232 (69%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || | |||| | ||||| |||| || ||||| || || || || |||||
Sbjct 289068 ATTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCA 289009
Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
|| || | | ||| || | || ||||| || | || | || |||||| || |
Sbjct 289008 --GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTG 288951
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288
| ||||| || |||||||| |||||||| ||| | ||| | || || |||| ||
Sbjct 288950 GGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCT 288891
Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| | ||| | || ||||| || || || ||||| |||||||||||
Sbjct 288890 CAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189
|||| ||| | || ||||| || || ||||| || || ||| || | | ||| |
Sbjct 289959 ACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTC--TGATAGTGTACGTCCATCCT 289902
Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249
| | ||| ||||| || | || | | ||| ||||| || ||||||||||| |||||||
Sbjct 289901 CAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTT 289842
Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
||||||| || | ||| | ||||| || | ||| ||||| || || | || |
Sbjct 289841 GAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCT 289782
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||| || || || || ||||| ||||||||
Sbjct 289781 TGCCAGTCAGTGTCTTCACAAATATTTGCAT 289751
>seq1305
Length=286731
Score = 127 bits (140), Expect = 2e-24
Identities = 180/250 (72%), Gaps = 6/250 (2%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|||||||| || | | ||| ||||||| || ||||||||||| || || || || |
Sbjct 24758 CCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCA--G 24815
Query 45174 ACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
|| | | | ||| || | |||||| || || | ||||| ||||||||||| || |
Sbjct 24816 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 24875
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGA 45291
|||| ||||| |||||||| ||||| ||| | ||||| || ||||| | ||| |
Sbjct 24876 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCA 24935
Query 45292 CTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC--C 45349
| ||||| |||| ||||| || || || || || || ||||||||||| | | |||
Sbjct 24936 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATTGTGAGACTGT 24995
Query 45350 AATTTAATAA 45359
||| ||||||
Sbjct 24996 AATATAATAA 25005
>seq2787
Length=76071
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
||||| || || || | ||| || | || || || ||||| ||||| |||||||| ||
Sbjct 39736 ATTCCACCACGAAGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCA 39677
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || || |||||||| ||||| ||| | ||||| ||||| || || ||
Sbjct 39676 GAAAGAGTGCGTCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 39617
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||||||||| || ||||||||||| ||| | ||| | || ||||||| ||
Sbjct 39616 GGAATGCCTTCCTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCA 39557
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||||| ||||| || || || ||||| ||||| || |||||
Sbjct 39556 ACTTCCAAAGTAATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 39507
Score = 111 bits (122), Expect = 1e-19
Identities = 159/222 (72%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189
|||| |||| || ||||| |||||||| || || || ||| || | || ||| |
Sbjct 40171 ACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA--GACAGTGTACGACCATCTT 40114
Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249
| ||||| || || || | || | ||||| || ||||| |||||||||||||| ||||
Sbjct 40113 CTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGAATGCCTTCTTTGTCTT 40054
Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309
| ||||| ||| | ||| | ||||| |||| || ||||| | ||||| ||||
Sbjct 40053 GGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACTTCTAAAGTAATTGTTT 39994
Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCATCGCGCGACCAA 45351
| || || || ||||| ||||| |||||||| ||| || ||
Sbjct 39993 TTCCAGTGAGTGTTTTAACAAAGATTTGCATACCGCCACGAA 39952
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| ||||| | | || | || || || || || || |||||||| || ||
Sbjct 41104 ATACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCA 41045
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| ||| |||| |||||| || ||| | || | ||||| || || ||
Sbjct 41044 GACAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGA 40985
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| ||||| ||||||||||| || ||| | ||| | |||||| || | |||
Sbjct 40984 GGAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCA 40925
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||| | ||||| || || || ||||| ||||| ||||||||
Sbjct 40924 ACTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCAT 40875
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || |||| ||| |||| ||| || || ||||||||||| |||||||||||
Sbjct 39964 ATACCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCA 39905
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || ||| || | ||||||||| || | || | | || || || ||
Sbjct 39904 GATAATGTACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGG 39845
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || ||||| ||||| || ||| || | ||| | |||||||| | |||
Sbjct 39844 GGAATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCT 39785
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||| | ||||| || || ||||| || ||||| || |||||
Sbjct 39784 ACCTCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | || |||| ||| || || || || |||||||| || || ||
Sbjct 40648 ATACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCA 40589
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || | || || || || | || | ||||| || || ||
Sbjct 40588 GACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGG 40529
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| || |||||||||||||| || || | ||| | |||||| || | |||
Sbjct 40528 GGAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCC 40469
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | || ||||| ||||| || || ||||| ||||||||
Sbjct 40468 ACCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451978853977640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |