Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_012959.1
Length=34920
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 417 2e-112
>seq3063
Length=7092
Score = 417 bits (462), Expect = 2e-112
Identities = 345/421 (82%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 10960 GGTGACGGCCTACGAGCAGACGGTGAAACAGGAGCGCAACTTCCAAAAGAGTTTCAACAA 11019
||| || || ||||||||||||||||| |||||| ||||| ||||| || || |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11020 CCACGTGCGCACCCTGATTGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTATGGGA 11079
|||||||||||| || | ||||||||||||||||| | || |||||||| || |||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11080 CCTGGCGGAGGCCATCGTGCAAAACCCGGACAGCAAGCCTCTGACGGCGCAGCTGTTCCT 11139
| | | || | | ||||||||| | |||||||| || | |||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11140 GGTGGTGCAGCACAGCAGGGACAACGAGGCGTTTAGGGAGGCGCTGCTAAACATTGCCGA 11199
| |||||||||||||||||||||||||| || ||||| |||||||||||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11200 GCCCGAGGGTCGCTGGCTGCTGGAGCTGATTAACATCTTGCAGAGCATCGTAGTGCAGGA 11259
||||||||| ||||||||||| || |||| ||||| |||||||||| || ||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11260 GCGCAGCCTGAGCCTGGCCGAGAAGGTGGCGGCGATCAACTACTCAGTGCTGAGCCTGGG 11319
||||||| |||||||||| || |||||||| || || ||||| || |||| || |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11320 CAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAAGAGGTGAA 11379
|||||||||||| |||||||| ||| | || || ||||| ||||||||||| ||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11380 G 11380
|
Sbjct 7092 G 7092
Score = 136 bits (150), Expect = 9e-28
Identities = 274/405 (68%), Gaps = 30/405 (7%)
Strand=Plus/Plus
Query 15642 ATGTCAAAGCGCAAAATCAAGGAGGAGATGCTCCAGGTCGTCGCCCCGGAGATTTACGGA 15701
||||| |||||||||||||| || ||||||||||||||| |||| |||||||| || ||
Sbjct 618 ATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAGGTCATCGCGCCGGAGATCTATGGC 677
Query 15702 CCCCCGGCG------GACCAG------AAACCCCGCAAAATCAAACGGGTTaaaaa---- 15745
|||||| | || ||| || ||||| || | || ||||| |||||
Sbjct 678 CCCCCGAAGAAGGAAGAGCAGGATTACAAGCCCCGAAAGCTAAAGCGGGTCAAAAAGAAA 737
Query 15746 ---aaaG--GATGAGG-TGGGC--GAGGGGGCAGTAGAGTTTGTGCGCGAGTTTGCTCCG 15797
|||| ||||| | || | || | | || || | ||| || || ||
Sbjct 738 AAGAAAGATGATGATGATGAACTTGACGACGAGGTGGAACTGCTGCACGCAACCGCGCCC 797
Query 15798 CGGCGGCGCGTAAATTGGAAGGGGCGCAGGGTGCAGCGCGTGTTGCGGCCCGGCACGGCG 15857
||||||| ||| | ||||| || || | || || || ||||| |||||||| |
Sbjct 798 AGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGCACCACC 857
Query 15858 GTGGTGTTTACGCCCGGCGAGCGGTCCTCGGTCAGGAGCAAGCGTAGCTATGACGAGGTG 15917
|| || ||||||||||| ||||| ||| | || |||||| ||||| ||||||
Sbjct 858 GTAGTTTTTACGCCCGGTGAGCGCTCCACCCGCACCTACAAGCGCGTGTATGATGAGGTG 917
Query 15918 TACGGCGACAACGACATCCTGGACCAGGCGGCGGAGCGGGCGGGCGAGTTCGCCTACGGG 15977
||||||||| | ||| | || || ||||| ||||| || ||||| ||||||||
Sbjct 918 TACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTTTGCCTACGGA 977
Query 15978 AAGCGGTCGCGCGAAGAGGAGCTGATCTCGCTGCCGCTGGACGAG 16022
|||||| | |||| || | || ||||||||||||||
Sbjct 978 AAGCGG------CATAAGGACATGTTGGCGTTGCCGCTGGACGAG 1016
Score = 109 bits (120), Expect = 1e-19
Identities = 129/178 (72%), Gaps = 15/178 (8%)
Strand=Plus/Plus
Query 15070 CCCAGCACCATGTACGGAGGAGCCAAGAAGCGCTCCCAACAGCACCCCGTTCGCGTCCGC 15129
|| |||| |||| || || || |||||||||||| | || ||||| || ||||| |||
Sbjct 3 CCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGC 62
Query 15130 GGCCACTTTCGCGCTCCCTGGGGCGCTTACAAGCGCGGGCGGACCTCTGCCCCCGCCGCC 15189
|| |||| ||||| ||||||||||| |||| ||||| || | |
Sbjct 63 GGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCG---------------CACT 107
Query 15190 GTGCGCACCACCGTCGACGACGTCATTGACTCCGTAGTCGCTGACGCGCGCAACTACA 15247
| ||||||||||||||| |||| ||||||| | || || | || |||||||||||||
Sbjct 108 GGGCGCACCACCGTCGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACA 165
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111616688351556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |