Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 114 2e-20
>seq3345
Length=207354
Score = 114 bits (126), Expect = 2e-20
Identities = 254/380 (67%), Gaps = 6/380 (2%)
Strand=Plus/Minus
Query 116235 CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 116294
||| | ||| |||| || | || || ||||| | ||||| || | ||||||||||||
Sbjct 112667 CAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCATATT 112608
Query 116295 AGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354
|| || || || ||||||||||| ||| ||||| | |||| |||||
Sbjct 112607 TGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAATTTTG 112548
Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414
|| |||| |||||||||||| | | |||| ||| ||| || | | | ||||
Sbjct 112547 AGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAATCT---ATTATTTTCA-- 112493
Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474
||| || | ||| || || || || || || ||||| | ||||| | |||
Sbjct 112492 -ACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGT 112434
Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534
||| | | || || || || | ||| || ||||| ||||| | || ||||||||
Sbjct 112433 GTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATT 112374
Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594
|||| ||||||| |||||||| || | ||| ||||| || || ||||| |||||
Sbjct 112373 ACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAGTCTCTACTTGGGC 112314
Query 116595 CTTGAGAATAGCCTTCCATA 116614
| | ||| | ||||||||
Sbjct 112313 TTCTATAATTGACTTCCATA 112294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613474154968440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |