Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 179 4e-40
seq3424 105 8e-18
seq2787 98.7 1e-15
>seq3463
Length=282612
Score = 179 bits (198), Expect = 4e-40
Identities = 640/990 (65%), Gaps = 33/990 (3%)
Strand=Plus/Minus
Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793
|||||| ||| || || || |||||||||||||| || | | ||||| || | |||
Sbjct 183021 AAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGAT 182962
Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853
| ||||| || ||| | || || | | || || |||||||| |||||||| ||
Sbjct 182961 CGTATACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGT 182902
Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913
||||| || || || ||| ||||| | | || ||| | | |||| ||
Sbjct 182901 GACGGCATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCC 182842
Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973
|| | || || ||||| || ||||||||| | | || |||| |||
Sbjct 182841 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 182782
Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031
|||||| | || ||||| | | |||||||||||| ||||| || || || | |
Sbjct 182781 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAA 182724
Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088
|| | || ||||| | ||| | | || || || ||| ||| ||||| ||||
Sbjct 182723 TGTCACTA---AAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGA 182667
Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148
| ||| ||| || |||| ||||| | || | | ||| | | | || || | |
Sbjct 182666 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAGT 182607
Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208
| || || || || | |||||||| ||||| ||||| || ||||| |||||||
Sbjct 182606 CAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGT 182547
Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268
| ||||| || || || || |||||||| | || | || || || || | ||
Sbjct 182546 TCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 182490
Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTGGGTGTG-GCCAATAAA 99327
|||| | | || |||| | ||| |||||| ||||| | | | || || ||
Sbjct 182489 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGACGA----GCTCTCAGCTAAGAAT 182434
Query 99328 CGTGTT---TACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGGTC 99384
|| |||||| | || ||| | |||| || | ||||||||| | || ||
Sbjct 182433 GGTAAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTA 182374
Query 99385 GATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGATT 99439
|| ||| || || |||| ||| |||| ||| | || || ||||||||||| |
Sbjct 182373 GA-----CTATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACT 182319
Query 99440 TTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCATCG 99498
| || || |||||||| || | ||| | || |||||||| |||||||| || ||| ||
Sbjct 182318 TCAAGGGAGCCTGGTCAAATGAC-ACTCTTGGACATCAAACGCCATTGTACGCGCCAGCG 182260
Query 99499 TGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAAAA 99558
||||| || | || | |||||| | || | | || ||| | | | | | |
Sbjct 182259 TGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGA 182200
Query 99559 GTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAGTG 99618
||| | || | ||||||||||| || || || ||||| || | || |||| ||| ||
Sbjct 182199 GTGAATCCTAAGAAGATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTT 182140
Query 99619 CATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCACC 99678
||||| |||||| | || | || || || || || ||||| || ||||| ||
Sbjct 182139 CATGATTACAAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACT 182080
Query 99679 TGGGAAAACGGTGTTGTTGATTATAGGCAG 99708
||| || |||| || ||||| |||||| ||
Sbjct 182079 TGGCAAGACGGAGTGGTTGACTATAGGGAG 182050
>seq3424
Length=494560
Score = 105 bits (116), Expect = 8e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | |||| ||||||||||| ||| ||||| || ||||||||||| |||
Sbjct 289749 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 289690
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || |||||||| || || || || | | ||||| || | ||
Sbjct 289689 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 289630
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || ||| || ||| || ||| ||| | | | | || || | ||||||
Sbjct 289629 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 289570
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| ||||| || ||||| ||||| || || ||||| |||||||||
Sbjct 289569 TCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| ||||| | |||| ||||| ||||| || ||||| || ||||||||||| |||
Sbjct 289521 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 289462
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| ||||| | || || |||||||| || || || || | | ||||| || | ||
Sbjct 289461 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 289402
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | ||| || ||| || ||| ||| | | | | || || | ||||||
Sbjct 289401 ATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 289342
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594
|||| ||||| || ||||| ||||| || || ||||| |||||||||
Sbjct 289341 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 289294
Score = 89.7 bits (98), Expect = 6e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
|| || |||| ||| || || | ||||| ||| ||||| |||||||| ||||| ||
Sbjct 288837 CCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAG 288778
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
|| |||||| | || || | ||||| |||||||| || | | || || || | ||
Sbjct 288777 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 288718
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| || |||||||| ||||| ||| | | | | || || | ||||||
Sbjct 288717 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 288658
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| ||||||||||| || || | ||||| || |||||||||||
Sbjct 288657 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611
>seq2787
Length=76071
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| |||||| || || | ||||| || ||| || || ||||||||||| ||
Sbjct 41329 CCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAA 41270
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| ||| | || || ||||||||||| ||||| || | || || || || | ||
Sbjct 41269 AGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 41210
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546
| | ||| ||||| |||||| || | | | | ||||| | ||| ||
Sbjct 41209 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 41150
Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| | ||||| ||||| || ||||| || || |||||||| |||||
Sbjct 41149 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103
Score = 93.3 bits (102), Expect = 5e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 46390 ATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTG 46449
|||||| ||| || |||||||| || ||||| || |||||||| | || || | |||
Sbjct 41534 ATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTG 41475
Query 46450 CTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTT 46509
|| || || || || | ||||| ||||| | || | || |||||| || ||||||
Sbjct 41474 TTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGGATCTT 41415
Query 46510 CTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
||| | | | | |||||| | ||||| |||| |||||||| || || ||
Sbjct 41414 AGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGT 41355
Query 46570 CAGCGTTTTAACAAAGATTTGCAT 46593
|| || ||||||||||| |||||
Sbjct 41354 AAGAGTCTTAACAAAGATCTGCAT 41331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565207954846680
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