Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_014899.1 Length=35203 Score E Sequences producing significant alignments: (Bits) Value seq3063 132 1e-26 >seq3063 Length=7092 Score = 132 bits (146), Expect = 1e-26 Identities = 284/419 (68%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 11807 ACGGCTTACCAGCAGACGGTGCGGCAGGAGCGGAGCTTCCAGCAGACGTTTAACCAT-AC 11865 || || ||| ||||||||||| |||||| | ||| || | | |||||| | || Sbjct 6676 ACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAACCAC 6735 Query 11866 GCTGCGGACTCTGCTGGCCCGGGAGGAGACGCGCGTCGGGCTGATGCACCTGTGGGACTT 11925 | |||| || || |||| || |||||| | | || |||||||| ||||||||||| Sbjct 6736 G-TGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGACTT 6794 Query 11926 TGCCCAAGCGCTGCGCGACAACCCGCAGAGTCGGGCGCTGACGGCCCAGTTGTTTTTGAT 11985 || |||||| | ||||| | || | |||| | ||| ||| |||| | || Sbjct 6795 TGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTAT 6854 Query 11986 CACGCAACACTGCCGCGACGAGGGCGTCTTTCGCGAGGCCTTGCTGGGTCTGGCGGAGCC 12045 ||| ||| || | ||| | | | || | || || |||| | | ||||| Sbjct 6855 AGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCC 6914 Query 12046 CGAGAGCCGCTGGCTCTTCGACCTGCTCGACATCCTCCAGAGCATCGTGGTCCAGGAGCA 12105 |||| |||||||||| |||| || | |||| || |||||||| ||||| ||||||| Sbjct 6915 CGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGC- 6973 Query 12106 GCGGCTGACGAC-GGAGGAGCGGGTGGCGGCCATCAACTACGCCGTCCTGACCCTGGGCA 12164 || ||| | | || || |||||| ||||| ||||| || | || | ||||||| Sbjct 6974 GCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCA 7033 Query 12165 AGTTTTACGCGCGTCGGGTGTACCGTACGCGGTTCGTGCCGCTCGACAAGGAGGTGAAG 12223 |||||||||| || | | |||| ||| | | ||| || | ||||||||||| ||| Sbjct 7034 AGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112522242012570