Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_015225.1
Length=35499
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 378 2e-100
>seq3063
Length=7092
Score = 378 bits (418), Expect = 2e-100
Identities = 307/372 (83%), Gaps = 0/372 (0%)
Strand=Plus/Plus
Query 11062 AGTTTCAACAACCACGTGCGCACGCTGGTGGCGCGCGAGGAGGTGGCCATCGGGCTGATG 11121
|| || |||||||||||||||||||| |||||||||||||||||||| || || ||||||
Sbjct 6721 AGCTTTAACAACCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATG 6780
Query 11122 CACCTGTGGGACTTTGTGGAGGCGTTCGTGCACAACCCGAGCAGCAAGGCGCTGACGGCG 11181
|| |||||||||||||| ||| | | ||| ||||| | |||||| |||| | ||||
Sbjct 6781 CATCTGTGGGACTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCG 6840
Query 11182 CAGCTGTTCCTAATCGTGCAGCACAGCCGCGACAACGAGCTGTTTCGCGACGCGCTGCTG 11241
||||||||||| || |||||||||||| | ||||||||| || | || ||||||||
Sbjct 6841 CAGCTGTTCCTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTA 6900
Query 11242 AACATCGCCGAGCCCGAGGGCCGGTGGCTGCTGGACCTGATTAACATCCTGCAGAGCATC 11301
||||| | |||||||||||||| |||||||| || |||| ||||| |||||||||||
Sbjct 6901 AACATAGTAGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATA 6960
Query 11302 GTGGTGCAGGAGCGCTCGCTCAGCCTGGCCGACAAGGTGGCGGCCATCAACTACTCGATG 11361
||||||||||||||| | |||||||| ||||||||||| ||||| ||||| || |||
Sbjct 6961 GTGGTGCAGGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATG 7020
Query 11362 CTGAGCCTGGGCAAGTTTTACGCGCGCAAAATCTACCGCAGCCCCTACGTGCCCATCGAC 11421
|| || ||||||||||||||||| ||||| || |||| | ||| ||||| ||||| |||
Sbjct 7021 CTCAGTCTGGGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGAC 7080
Query 11422 AAGGAGGTGAAG 11433
|||||||| |||
Sbjct 7081 AAGGAGGTAAAG 7092
Score = 147 bits (162), Expect = 5e-31
Identities = 131/164 (80%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 15256 AGCAAGATGTACGGGGGCGCCAAACGCCGCTCCAGCGAGCATCCCGTGCGCGTGCGCGGC 15315
|||||||||| || || || || |||||| | | || || ||||||||||||||
Sbjct 6 AGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGG 65
Query 15316 CACTACCGCGCGCCCTGGGGGGCCCACAAGCGCGGCCGCACGGGGCGCACCACGGTCGAC 15375
|||||||||||||||||||| || ||||| ||||||||||| ||||||||||| |||||
Sbjct 66 CACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGAT 125
Query 15376 GAGGTCATTGACAGCGTGGTGGCCGACGCCGCCAACTACACGCC 15419
|| | ||||||| ||||||| || || ||||||||||||
Sbjct 126 GACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCC 169
Score = 96.9 bits (106), Expect = 8e-16
Identities = 99/127 (78%), Gaps = 2/127 (2%)
Strand=Plus/Plus
Query 15631 CGACGAGCGGCCCGTCGC-GCCGCGGCCGCCATCAGCCGCATGTCCCGGGGGCGCCGCGG 15689
|||||||||| ||| ||| || || || ||||| || ||| | | ||| ||| | ||
Sbjct 417 CGACGAGCGG-CCGCCGCAGCAGCCGCGGCCATTAGTGCTATGACTCAGGGTCGCAGGGG 475
Query 15690 CAACGTGTACTGGGTGCGTGACTCGGTCACCGGCCTGCGCGTACCGGTGCGCTTTCGCCC 15749
|||||||||||||||||| ||||||| |||||||||||| || |||||| |||||
Sbjct 476 CAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGCCC 535
Query 15750 CCCTCGC 15756
||| |||
Sbjct 536 CCCGCGC 542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113469393544938
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