Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 102 5e-17
seq1305 96.9 2e-15
seq3424 93.3 3e-14
>seq2787
Length=76071
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
||| |||||||||| || |||||| ||||| |||||||| ||||| | ||| | ||
Sbjct 39719 CAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTC 39660
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|||| || ||||| || || || | ||||| || ||| | || | || ||||||||
Sbjct 39659 TTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTC 39600
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||| || ||| || | | || | || | ||||| || | || |||||
Sbjct 39599 TTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGT 39540
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
||| ||||| || || ||||||||||||||||| ||
Sbjct 39539 TTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829
|| || ||||| | ||| ||||||||||| || ||||| ||||| | || ||||
Sbjct 41314 AATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCC 41255
Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889
|||||||| || || || || || || ||||| || ||| | || | ||||| |||||
Sbjct 41254 TCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCT 41195
Query 34890 CTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949
||||| ||| || | | || | || || ||||| || | || || |||
Sbjct 41194 TGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTT 41135
Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || || || ||||| |||||||||||||||
Sbjct 41134 TTCCCTGTCAGTGTCTTTACAAAGATCTGCATA 41102
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||| || |||||||||||||| || | || |||| || | |||||| || |||||
Sbjct 41522 TTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAA 41463
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || || || |||||| | || | |||||||| || ||||| || ||
Sbjct 41462 GATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGGATCTTAGCCTTAACATT 41403
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | || | ||| || || | || ||||| || || || |||||||| ||
Sbjct 41402 TTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAAC 41343
Query 34970 AAAGATCTGCATA 34982
|||||||||||||
Sbjct 41342 AAAGATCTGCATA 41330
>seq1305
Length=286731
Score = 96.9 bits (106), Expect = 2e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 34775 CAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
|||| || | |||| ||| || |||||||| ||||| || | | ||| |||| || |
Sbjct 24777 CAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTA 24836
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
| ||||| || ||||| || | |||||||||||| | || | || ||||| || |
Sbjct 24837 GTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGA 24896
Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
| || ||| || | |||| | || |||||| || |||| ||| |||||||| |
Sbjct 24897 TTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTAC 24956
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|||| || ||||| || || || |||||
Sbjct 24957 CCGTAAGGGTCTTGACGAAAATTTGCAT 24984
>seq3424
Length=494560
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || || | | |||||| || || | || || ||||| || ||||||||||
Sbjct 290207 TTCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCG 290148
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
| | | ||| |||| ||||| || |||||||| || || |||| ||| || ||| | |
Sbjct 290147 ACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 290088
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || |||||||| |||||| || || | |||| | ||| ||||| |
Sbjct 290087 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCA 290028
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | ||| || ||||| || || | || |||||||| || |||||
Sbjct 290027 CTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
||||||||||||||| || || || || | ||| |||| || ||||| ||||| |||||
Sbjct 289030 TTCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAA 288971
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| |||| |||||| ||| | || | ||||| || || ||| ||| ||| ||
Sbjct 288970 AATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATT 288911
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| | |||||| || | || || || || || || || ||||| ||
Sbjct 288910 TTCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTAC 288851
Query 34970 AAAGATCTGCAT 34981
|| || |||||
Sbjct 288850 GAAAATTTGCAT 288839
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| ||||| | | || |||||||| | || ||| || ||||| ||||| || |
Sbjct 289295 TTCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTG 289236
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
| || | ||| |||| |||||||||||||| ||||| || || | || ||||| | |
Sbjct 289235 ACAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAG 289176
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAA 34932
| | || || ||||| ||| || || || | |||| | ||| ||||| |
Sbjct 289175 GAATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCA 289116
Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
| || | || || ||||| || || || ||||| ||||| || |||||
Sbjct 289115 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067
Score = 86.0 bits (94), Expect = 4e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849
|||||||||||| || ||||| || || | ||| |||| || || || ||||| |||||
Sbjct 289942 TTCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCCTCAAGTTGCTTTCCAGCAAA 289883
Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909
|| || | ||| |||||| | || | || ||||| || ||| || || ||
Sbjct 289882 AATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTGGCCTTAACATT 289823
Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969
| | || | ||| || |||||| || | || || || || || || || ||||||||
Sbjct 289822 TTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCAC 289763
Query 34970 AAAGATCTGCAT 34981
||| || |||||
Sbjct 289762 AAATATTTGCAT 289751
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||| || ||||||||||| | | ||| |||| ||||| || |||||||| ||
Sbjct 290397 TCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAA 290338
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| |||| ||| || ||| | || | || ||||| || |||||| || || |
Sbjct 290337 ATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTT 290278
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
|||| | ||| || || || || | || || ||||| || || || ||||| |||
Sbjct 290277 TCTATTGTATCAGAAGCTTCCACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACA 290218
Query 34971 AAGATCTGCAT 34981
|| || |||||
Sbjct 290217 AAAATTTGCAT 290207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324616551562152
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