Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_015932.1 Length=31616 Score E Sequences producing significant alignments: (Bits) Value seq3063 161 2e-35 >seq3063 Length=7092 Score = 161 bits (178), Expect = 2e-35 Identities = 284/414 (69%), Gaps = 0/414 (0%) Strand=Plus/Plus Query 10121 GGTGACGGCCTATGAGCAGACAGTGAAGGAGGAGGTGAACTTTCAAACCTCCTTTAACAA 10180 ||| || || || |||||||| ||||| ||||| | |||||||||| ||||||||| Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 10181 TAACGTGCGCACTCTCATTGCCAGAGAGGAAGTTGTTATTGGCCTAATGCACCTCTGGGA 10240 |||||||||| || | || | ||||| || | ||| || || ||||| || ||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 10241 CTTTGTCCAGTCATTCCTAGAAAACCCCCTGAGCAAGGCCCTCACCGCCCAGCTTTTCCT 10300 |||||| | | ||||||| |||||| | |||| || ||||| ||||| Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851 Query 10301 TATTGTGCAACACTGCCGGGATGAGGGAGTGCTGCGGGAGAGCCTGCTGAATATCGCCCA 10360 ||| ||||| ||| || |||| | | | | |||| ||||| || || | | Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911 Query 10361 GCCCGAAAGCCGCTGGCTGATAGATCTGCTTAACCTCTTGCAAACTATTGTAGTGCAGGA 10420 |||||| ||||||||||| | ||| || | ||| | |||| | || || |||||||| Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971 Query 10421 GCGGGGGCTGGCCCTGGGGGAGAAGGTGGCAGCCATCAATTATTCTATCATTACTCTAAG 10480 ||| | || ||||| || |||||||| ||||| || ||||| || | | ||| | Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031 Query 10481 CAAACACTATGCTAGAAAGATCTTCAACTCGGTCTTTGTTCCCATCGACAAGGA 10534 ||| || || | ||||| | | | | | |||||||| |||||||| Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGA 7085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101044429355124