Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_016895.2 Length=31806 Score E Sequences producing significant alignments: (Bits) Value seq3063 194 3e-45 >seq3063 Length=7092 Score = 194 bits (214), Expect = 3e-45 Identities = 273/386 (71%), Gaps = 6/386 (2%) Strand=Plus/Plus Query 10150 GGTGACCGCGTACGAGCAGACAGTGAAGGAGGAAGTGAACTTCCAGACCTCTTTTAACAA 10209 ||| ||||||||||||||||| ||||| |||| | ||||| || | |||||||| Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 10210 CAACGTGCGCACGCTCATCTCGCGGGANNNNNNNNNNNNNNNNCTGATGCACCTGTGGGA 10269 | ||||||||||||| | |||| || |||||||| |||||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 10270 CTTTGTGCAGGCCTACCTGGAG---AACCCCCTGAGCAAGGCGCTGACGGCGCAGCTCTT 10326 |||||| || | |||||| ||||| |||||| |||| | ||||||||| || Sbjct 6792 CTTTGT-AAG--CGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTT 6848 Query 10327 TCTGATTGTGCAGCACTGCCGGGACGAGGGGGTGCTGAGGGAGAGCCTGCTGAACATAGC 10386 || || ||||||||| || ||||| | | || | ||||| ||||| ||||||| Sbjct 6849 CCTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGT 6908 Query 10387 AGAGCCCGAGAGCAGGTGGCTGGTGGACCTGCTCAACCTGCTGCAGACCATAGTTGTGCA 10446 |||||||||| || | |||||| | || || | ||| | ||||||| |||||| ||||| Sbjct 6909 AGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCA 6968 Query 10447 AGAGCGCGGTCTGGCGGTGGGGGAGAAGGTGGCGGCCATAAATTACTCGGTCATTACCCT 10506 |||||| | || ||| || |||||||| ||||| || || || | | | || Sbjct 6969 GGAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCT 7028 Query 10507 GAGCAAACATTACGCCCGGAAGATAT 10532 | |||| ||||||||| ||||||| Sbjct 7029 GGGCAAGTTTTACGCCCGCAAGATAT 7054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101652398244144