Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1351 147 3e-30
>seq1351
Length=825266
Score = 147 bits (162), Expect = 3e-30
Identities = 159/211 (75%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503
||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || |
Sbjct 602225 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 602284
Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563
|||||||||| || ||||| ||||||| | |||||| || | |||| | || | |
Sbjct 602285 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 602344
Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623
|||| |||||||| || |||||| ||| |||||||| || | ||||| || |||||||
Sbjct 602345 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACATGCTTGATAAAAT 602404
Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATC 37654
|| | ||| || | |||| | | ||||||
Sbjct 602405 GTTTCTCACAATCTTTTAATGTCTCCCAATC 602435
Score = 86.0 bits (94), Expect = 7e-12
Identities = 172/250 (69%), Gaps = 5/250 (2%)
Strand=Plus/Plus
Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229
||||| || |||||| || | | |||| |||| ||| || | ||||||| ||
Sbjct 601367 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 601425
Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289
|| ||||| ||||| | ||||| |||||| | ||||||||||| ||||| || ||
Sbjct 601426 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 601485
Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAA 37349
|| || || || |||||||||||||| || | | |||| || || || | || |
Sbjct 601486 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGT--AGCTGTCT 601543
Query 37350 T-CAG-AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407
| | | ||||| | | | ||| |||||||| ||||||||| | |||||||
Sbjct 601544 TGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAA 601603
Query 37408 TTGCTTTTAA 37417
|||| || ||
Sbjct 601604 TTGCATTGAA 601613
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592284896336360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |