Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1351 147 3e-30 >seq1351 Length=825266 Score = 147 bits (162), Expect = 3e-30 Identities = 159/211 (75%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 37444 TTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCT 37503 ||||||| || ||||||| |||| ||||| || || |||| |||||| ||||| || | Sbjct 602225 TTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTTTCCATAGCAATTT 602284 Query 37504 GAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTA 37563 |||||||||| || ||||| ||||||| | |||||| || | |||| | || | | Sbjct 602285 GAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAAAAACGCTCCACCA 602344 Query 37564 AGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAAT 37623 |||| |||||||| || |||||| ||| |||||||| || | ||||| || ||||||| Sbjct 602345 AGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACATGCTTGATAAAAT 602404 Query 37624 GTCTTTCATCATTTGATAATTTTTTCCAATC 37654 || | ||| || | |||| | | |||||| Sbjct 602405 GTTTCTCACAATCTTTTAATGTCTCCCAATC 602435 Score = 86.0 bits (94), Expect = 7e-12 Identities = 172/250 (69%), Gaps = 5/250 (2%) Strand=Plus/Plus Query 37170 AATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAG 37229 ||||| || |||||| || | | |||| |||| ||| || | ||||||| || Sbjct 601367 AATAAGAATACAAAATTACGAAACATACCT-CATCCCTAGAAATAAGTTCATTACTGAAA 601425 Query 37230 GTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAA 37289 || ||||| ||||| | ||||| |||||| | ||||||||||| ||||| || || Sbjct 601426 GTCAATCCGGGCATCAGACCTCGTTTTTTCAACCAAAATATTGAAGCAAAGCTGCCTGAG 601485 Query 37290 AAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAA 37349 || || || || |||||||||||||| || | | |||| || || || | || | Sbjct 601486 AAAAATATTCCCTCAACTGCTGCAAAAGCAATTATACGTTCTCCAAATGT--AGCTGTCT 601543 Query 37350 T-CAG-AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 | | | ||||| | | | ||| |||||||| ||||||||| | ||||||| Sbjct 601544 TGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAACACATGGTAGAGTTTCAA 601603 Query 37408 TTGCTTTTAA 37417 |||| || || Sbjct 601604 TTGCATTGAA 601613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592284896336360