Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_017825.1
Length=36711
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 367 3e-97
>seq3063
Length=7092
Score = 367 bits (406), Expect = 3e-97
Identities = 334/421 (79%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11285 GGTCACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAA 11344
||| || |||||||||||||| ||||| |||||| ||||| |||||| ||| |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11345 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGA 11404
|||||||||||| || | ||||||||||||||| | | || |||||||| ||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11405 CCTGCTGGAGGCCATCGTGCAGAACCCCACCAGCAAGCCGCTGACGGCGCAGCTGTTCCT 11464
| | | || | | ||| ||||| | ||||||||||| | |||||||||||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11465 GGTGGTGCAGCATAGTCGGGACAACGAGGCGTTCAGGGAGGCGCTGCTGAATATCACCGA 11524
| |||||||| || ||||||||||||| |||||||| |||||||| || || ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11525 GCCCGAGGGCCGCTGGCTCCTGGACCTGGTGAACATTCTGCAGAGCATCGTGGTGCAGGA 11584
|||||||||||||||||| || || || | ||||||||||||||||| |||||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11585 GCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTCTCGGTGCTGAGTCTGGG 11644
|||| | || ||| | || ||| |||| ||||| |||| || |||| ||||||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11645 CAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAA 11704
||||| ||||| | ||||| ||| | ||||| ||||| ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11705 G 11705
|
Sbjct 7092 G 7092
Score = 205 bits (226), Expect = 2e-48
Identities = 352/512 (69%), Gaps = 43/512 (8%)
Strand=Plus/Plus
Query 16000 GGGAACGTGTACTGGGTGCGCGACGCCGCCACCGGTGTGCGCGTGCCCGTGCGCACCCGC 16059
|| ||||||||||||||||||||| | | ||| |||||||||||||||||||||||
Sbjct 474 GGCAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGCACCCGC 533
Query 16060 CCCCCTCGCAC-----TTG-AAGATGTTC--ACTTCG---CGA--TGTTG-ATGTGTCC- 16104
||||| |||| ||| |||| |||| | || ||||| |||| |||
Sbjct 534 CCCCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATGTATCCA 593
Query 16105 ----CAGCGGCGAG----GAGG--ATGTCCAAGCGCAAATTCAAGGAAGAGATGCTCCAG 16154
| |||||| | || | ||||||||||||||| |||| |||||||||||||||
Sbjct 594 GCGGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATGCTCCAG 653
Query 16155 GTCATCGCGCCTGAGATCTACGGCCCCGCGGTGGTGAAGGAGGA--AAGA----AAGCCC 16208
||||||||||| |||||||| |||||| || | ||||| || | || ||||||
Sbjct 654 GTCATCGCGCCGGAGATCTATGGCCCCCCGAAG---AAGGAAGAGCAGGATTACAAGCCC 710
Query 16209 CGCAAAATCAAGCGGGTCAANNNNNNNNNNNNNNNNNNNNNNNNCGATCT---------G 16259
|| || | ||||||||||| || || |
Sbjct 711 CGAAAGCTAAAGCGGGTCAAAAAGAAAAAGAAAGATGATGATGATGAACTTGACGACGAG 770
Query 16260 GTGGAGTTTGTGCGCGAGTTCGCCCCCCGGCGGCGCGTGCAGTGGCGCGGGCGGAAAGTG 16319
||||| | ||| || ||| ||| ||||||| || |||||| || || ||
Sbjct 771 GTGGAACTGCTGCACGCAACCGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTA 830
Query 16320 CACCCGGTGCTGAGACCCGGCACCACCGTGGTCTTCACGCCCGGCGAGCGCTCCGGCAGC 16379
| || || |||||||||||||||| || || |||||||| ||||||||| | ||
Sbjct 831 AGACGTGTTTTGCGACCCGGCACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACCCGC 890
Query 16380 GCTTCCAAGCGCTCCTACGACGAGGTGTACGGGGACGAGGACATCCTCGAGCAGGCGGCC 16439
| | ||||||| || || ||||||||||| ||||||||| | || |||||||| |
Sbjct 891 ACCTACAAGCGCGTGTATGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAAC 950
Query 16440 GAGCGCCTGGGCGAGTTTGCTTACGGCAAGCG 16471
|||||||| || |||||||| ||||| |||||
Sbjct 951 GAGCGCCTCGGGGAGTTTGCCTACGGAAAGCG 982
Score = 129 bits (142), Expect = 1e-25
Identities = 137/177 (77%), Gaps = 4/177 (2%)
Strand=Plus/Plus
Query 15544 CCCAGCAAGATGTACGGAGGCGCTCGCCAACGCTCCACGCAACACCCCGTGCGCGTGCGC 15603
|| |||||||||| || || || | |||||| |||||||| ||||||||||||
Sbjct 3 CCAAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGC 62
Query 15604 GGGCACTTCCGCGCTCCCTGGGGCGCCCTCAAGGGCCG-CGTGCGGTCGCGCACCACCGT 15662
||||||| |||||| ||||||||||| | ||| || | || | | ||||||||||||
Sbjct 63 GGGCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTG-GGCGCACCACCGT 121
Query 15663 CGACGACGTGATCGACCAGGTGGTGGCCGACGCGCGCAACTACA--CCCCCGCCGCC 15717
||| |||| || ||| |||||||| || ||||||||||||| ||| |||||||
Sbjct 122 CGATGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCC 178
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117347595089634
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