Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3463 196 4e-45 seq2396 178 1e-39 seq2787 123 2e-23 seq3424 105 5e-18 seq3386 87.8 1e-12 seq1386 87.8 1e-12 >seq3463 Length=282612 Score = 196 bits (216), Expect = 4e-45 Identities = 485/731 (66%), Gaps = 9/731 (1%) Strand=Plus/Minus Query 27695 GGAACCGTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAG-ACAGTATCCGGC 27753 |||| || |||| || ||||| || || |||||||| ||| ||| | | | ||| Sbjct 183024 GGAAAAGTTGTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTG 182965 Query 27754 CAACAAACTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGG 27813 | | | |||| ||||| ||||| || |||||||| ||||||||| | || |||||||| Sbjct 182964 GATCGTA-TACCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGG 182906 Query 27814 CGGAGACGGTATCAACGATAGCCTAAAACAGATCCCCAATTC--TTTTGAGGTCCTCCAA 27871 ||| ||||| ||||| ||||| ||||| ||||| || | ||| | | || || Sbjct 182905 CGGTGACGGCATCAATGATAGTTTAAAAGAGATCG--AAGGCAGTTTCCAAGCACTACAG 182848 Query 27872 AAGTCATGCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTG 27931 ||| || ||| | ||||| | || || |||||| ||||| || | Sbjct 182847 CGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTA 182788 Query 27932 CAAAAACCGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAG 27991 |||||||| ||||| || | | ||||||||||| ||||| || ||||||||||| Sbjct 182787 CAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAA 182728 Query 27992 TTGATGGCCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGG 28051 || ||| | | |||| | || || | | || || ||||| |||||||||||| Sbjct 182727 TTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGG 182668 Query 28052 ACTCTGAGCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTGCCGTGTTTGTAGAG 28111 || || |||||| ||||| ||| | ||| | ||| | | ||||| || Sbjct 182667 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAGAGAACACGATTTGTGCAG 182608 Query 28112 TCTGTGCGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAG 28171 || || || ||||| | ||| ||||| ||||| || || || ||| | || |||||| Sbjct 182607 TCAGTAAAGGAGTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAG 182548 Query 28172 TTTCCGGGTGGAAAGGGAGCCAACCCCGCGATCGGTAACCCCGACATTGACGCAAAAACG 28231 || || ||||| || || || ||||| | |||||| ||| || || | | Sbjct 182547 TTCCCTGGTGGCAAAGGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGT 182491 Query 28232 TACACCGCGCTGTTGCGCGAACTAAGATTTATGCTGGACGAGTTGGCGGaaaaaaaCGAT 28291 || || || ||| || | ||||| |||||| | | | || || | | Sbjct 182490 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGACGAGCTCTCAGCTAAGAATGGT 182431 Query 28292 CGCGTCTACCAACTAACCACCGCTATTAGCGCCGGGCATGATAAAATACAAGTGGTCAAC 28351 ||| || |||| | ||||||||||| || |||||||| ||||| || || Sbjct 182430 AAGAAATACGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTAGAC 182371 Query 28352 TACGCTTCGGCCCAAAAACATCTGGACCACATTTTCGTTATGAGTTACGATTTTAGGGGC 28411 || | ||| ||||| || |||| || |||||| | ||||||||||| || | ||| Sbjct 182370 TATGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGA 182311 Query 28412 GCCTGGTCCAA 28422 |||||||| || Sbjct 182310 GCCTGGTCAAA 182300 >seq2396 Length=191974 Score = 178 bits (196), Expect = 1e-39 Identities = 188/248 (76%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 7828 CGTCTGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGCC 7887 || |||| || |||| |||||||| ||||| |||||||| || || | || ||| Sbjct 136550 CGCCTGCGCAGCTTCAGCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCC 136609 Query 7888 GAAGCTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGGG 7947 ||||| ||||| | |||||| |||| ||||| | || ||||| |||||||||||||| Sbjct 136610 GAAGCGGGATTCTTCTACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGC 136669 Query 7948 GGTCTCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGAT 8007 || ||||| || |||||| | |||| | ||||||||||| |||||||||||||| || Sbjct 136670 GGACTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGAC 136729 Query 8008 AAATGCGCATATGTCAAACTAGTCAAAGGGGAGGAATATGTTCAGAAGGTAATTACTGAA 8067 ||||| || || | || |||||||| || || || |||||||| || || ||| Sbjct 136730 CGGTGCGCCTACGTGCAGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAA 136789 Query 8068 GCGTGCGC 8075 |||||||| Sbjct 136790 GCGTGCGC 136797 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 7603 AACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGCGCGTTTTGTAAAGTGGAA 7662 || || || |||||| |||| || | || || || || ||||||||||||||||| ||| Sbjct 136265 AATGGCTTCTATTATCTGGGCCGCGGCGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 136324 Query 7663 ATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCATCGGAAGTGGGCACCGCAG 7722 || ||| ||||| | || |||||||| | |||||||| | | ||||| || ||| Sbjct 136325 ATTATGAAATGGGTTGCGGGCGACGATCCCGCCAAGGACCACCAGCGCTGGGCGCCTCAG 136384 Query 7723 TGTCCGTTTCT 7733 || || ||||| Sbjct 136385 TG-CCCTTTCT 136394 >seq2787 Length=76071 Score = 123 bits (136), Expect = 2e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| ||||| || || || |||||||||||||| || ||||| ||| | || Sbjct 39724 AGACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGT 39665 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||| ||||| || || || |||| || |||||||| | |||| ||| ||| Sbjct 39664 CCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCC 39605 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || ||||||| | | || || || | || || |||| ||| Sbjct 39604 TTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTA 39545 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | ||||| ||||| |||||||| Sbjct 39544 ATGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCAT 39507 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 ||||| | |||||||| || |||||||| || || ||||||||||| ||||||||| Sbjct 39961 CCGCCACGAAGCCGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGAT 39902 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || | || || | || || || ||||| || || | ||||||||| | |||| Sbjct 39901 AATGTACGGCCATCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGA 39842 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| ||||| |||||| || ||| | | || || |||| ||| ||| Sbjct 39841 ATACCCTCTTTGTCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACC 39782 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || |||||||| || | ||| || ||||| |||||||| Sbjct 39781 TCTAAAGTGATGGTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCAT 39735 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || | ||| || || ||| || || || ||||| ||||| || | ||| Sbjct 40408 AGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGA 40349 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| |||||||| ||||| || || ||||| ||||| | || | |||||| Sbjct 40348 CCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCT 40289 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||||||| | | || || || | ||||| |||| ||| Sbjct 40288 TTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTA 40229 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | ||||| |||||||||||||| Sbjct 40228 ATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| || || || || |||||| ||||||||||||||||| | | | ||| Sbjct 40864 AGACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGA 40805 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| ||||| || ||||| || || || ||||| || | ||| | ||||||| Sbjct 40804 CCATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCC 40745 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || || || ||| ||| | | | || || | || || |||| ||| Sbjct 40744 TTATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTA 40685 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| ||||| ||||| || ||||| Sbjct 40684 ATGGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 || || || || || | ||| |||||| ||||||||||| ||||| ||| | || | Sbjct 41317 CGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCA 41258 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || |||| |||||| || || || || || || |||||||| | ||||| ||||| ||| Sbjct 41257 TCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTG 41198 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||| ||| ||| | | || ||||| | || || || | || || Sbjct 41197 TCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATA 41138 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || |||| || |||||||| |||||||| Sbjct 41137 GTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| || ||||| || || ||||||||| || ||||| ||||| || | ||| Sbjct 40636 AGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGACAGGGTGCGA 40577 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || || |||||||| | ||||| ||||| Sbjct 40576 CCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGAATACCCTCT 40517 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| |||||| | | | || || | ||||||||||| || Sbjct 40516 TTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCACCTCCAGAGTT 40457 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || ||||| || ||||| Sbjct 40456 ATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 |||||||| || || || || || ||| | || | || || ||||| ||||| ||||| Sbjct 41521 TCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCCATCCTCTAACTGTTTACCAGCAAAG 41462 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || |||||||| || | ||||| ||||||||| || ||||| || ||| Sbjct 41461 ATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTATCTTGGATCTTAGCCTTAACATTT 41402 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || | ||||||||||| || || || || || || | ||| || ||| Sbjct 41401 TCGATAGTGTCGGATGGCTCCACCTCCAAAGTGATGGTCTTCCCAGTAAGAGTCTTAACA 41342 Query 48756 AAAATCTGCAT 48766 || |||||||| Sbjct 41341 AAGATCTGCAT 41331 >seq3424 Length=494560 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| || ||||| ||||| || ||||| | || ||| || || ||||| || || || Sbjct 290434 GCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGA 290375 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | || | || |||| ||||| ||||| || ||||||| |||||||| | || Sbjct 290374 CAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGG 290315 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||| ||||| || ||||||| || ||| | | | || || || ||||| Sbjct 290314 AATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 290255 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || ||||| || |||| || ||||||||||| ||||| Sbjct 290254 CTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290207 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| |||||| || | || || ||||||||||| ||||| || Sbjct 289293 CCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGAC 289234 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| ||| || || ||||| || || | |||||| || | ||| Sbjct 289233 AGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGA 289174 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| || ||||| ||| ||| || ||| | | | || || |||||||| Sbjct 289173 ATGCCTTCTTTGTCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCACT 289114 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || |||| || |||||||| || ||||| Sbjct 289113 TCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289067 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||||||| || || || || || | || || || || ||||| || || || Sbjct 288837 CCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAG 288778 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || ||||| ||||| ||||| || || |||| |||||||| | || Sbjct 288777 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 288718 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| ||||||| ||||| | | | || || || ||||| Sbjct 288717 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 288658 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || ||||| || || ||||||||||| || || ||||| Sbjct 288657 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCAT 288611 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| || ||||| || || |||| | || | || |||| ||||| ||||| || Sbjct 290625 TCTTTCTGGATATTATAGTCTGATAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAA 290566 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 ||||||| |||||||| | |||| ||| ||||| || ||||||| || ||| Sbjct 290565 ATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTT 290506 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || || ||||| |||| || || ||||| || |||| || |||||| Sbjct 290505 TCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACA 290446 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 290445 AAAATTTGCAT 290435 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || ||||||| |||| ||| | || || || ||||||||||| |||||| Sbjct 289749 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 289690 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || |||| || ||||| | |||| Sbjct 289689 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 289630 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||| || || ||| || || ||| | | | || || || ||||| Sbjct 289629 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 289570 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || |||| || |||||||| || ||||| Sbjct 289569 TCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289523 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || ||||||| |||| || | || || || ||||||||||| |||||| Sbjct 289521 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 289462 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || || | |||||| || ||||| || |||| || ||||| | |||| Sbjct 289461 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 289402 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||| || || ||| || || ||| | | | || || || ||||| Sbjct 289401 ATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 289342 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| || || || || || |||| || ||||||||||| ||||| Sbjct 289341 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 289295 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| ||||| |||||||||||||| | || | || || | |||||| || ||||| Sbjct 289029 TCTTTCTGAATGTTGTAATCAGATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAA 288970 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || |||| || ||||| | ||||| ||||| || || ||| || ||| ||| Sbjct 288969 ATAAGTCTTTGCTGATCTGGGGGAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTT 288910 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||| || |||| || || || || || |||| || ||||| Sbjct 288909 TCAATTGTATCAGAAGGCTCAACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACG 288850 Query 48756 AAAATCTGCAT 48766 ||||| ||||| Sbjct 288849 AAAATTTGCAT 288839 >seq3386 Length=83803 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126 || || || ||| |||||| |||| ||||||||| || || || || || || |||| Sbjct 34 GGGTAGAAAATTCTTTCACATATTAGTTGAGCAATTCTATCACCTTTTTTAACTGCAAAA 93 Query 9127 TCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATC 9186 ||| |||||||||||| | ||||||||| | ||| || | ||| || ||||| || Sbjct 94 TCTTCACTGGAATGATTGAATAACACCACTCCAATGTTTCCACGGTAGTCTTCATCTATG 153 Query 9187 ACACCAGC 9194 |||||||| Sbjct 154 ACACCAGC 161 >seq1386 Length=428454 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 9067 GGATAAAAGATTTGTTCACAAATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAG 9126 || || || ||| |||||| |||| ||||||||| || || || || || || |||| Sbjct 422100 GGGTAGAAAATTCTTTCACATATTAGTTGAGCAATTCTATCACCTTTTTTAACTGCAAAA 422159 Query 9127 TCTGTGTCGGAATGATTGAACAGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATC 9186 ||| |||||||||||| | ||||||||| | ||| || | ||| || ||||| || Sbjct 422160 TCTTCACTGGAATGATTGAATAACACCACTCCAATGTTTCCACGGTAGTCTTCATCTATG 422219 Query 9187 ACACCAGC 9194 |||||||| Sbjct 422220 ACACCAGC 422227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380917594704807