Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 255 5e-63
seq3424 109 5e-19
seq2787 109 5e-19
>seq3463
Length=282612
Score = 255 bits (282), Expect = 5e-63
Identities = 838/1286 (65%), Gaps = 32/1286 (2%)
Strand=Plus/Plus
Query 105818 TGTTCATGGCATTGAGTAAATCGCCGTTATCGGCATCTATTTCCCAAGCAAACAAACCGC 105877
||||||||||||| |||| || |||||||| || || | |||||||||||| | ||| |
Sbjct 181833 TGTTCATGGCATTCAGTAGGTCACCGTTATCAGCGTCCACTTCCCAAGCAAAGAGACCAC 181892
Query 105878 CCAGTTTGTTTCGATCGACATATTTAACCTTGCCCAAAACAGAATCGA-CGCTATCAAAC 105936
| || ||||| ||||||||| |||| | | ||| || || | | ||||| |
Sbjct 181893 CTAGCTTGTTATTTCTTACATATTTACCCTTTTCAATAACCGA-TCTAGCATTATCATAG 181951
Query 105937 GAAATTAAATCCNNNNNNNNNNNNNCAAAAACGTACGAAGCTTGAGCGACATTGTCAAAC 105996
| | | ||| || ||||| | ||||| ||||||||||| |
Sbjct 181952 GTTACAAGATCTCCAGTTGATGGTCTGAAGACGTAAGGGGCTTGGGCGACATTGTCGTAA 182011
Query 105997 GTGTACACGTACGTG--TTCAG---TTTTGTTTG-AATCTGTCGGTAATCTACGACGCCG 106050
| || | || || || || ||| || | ||||| | || || || || |||
Sbjct 182012 TGGAACTCCCACTTGCCTTGAGCGATTTCATTCGCAATCTCCCTATAGTCAACCACTCCG 182071
Query 106051 TCCTCCCAAGTGCCC--GACACGGGCCCGTTGCCGATTCCCGAAAAATAGTTGTTGCCAG 106108
|| | |||||| || |||| || || || || | | || | || ||||| |
Sbjct 182072 TCTTGCCAAGTTCCTTTGACA-GGTCCAGTAGC-GTTGCCTGTGAAGGGAATGTTGTCTT 182129
Query 106109 TATAATTGGTCACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTGT 106168
| |||| ||||| ||||| || || || ||||| ||||| ||||| | || || |
Sbjct 182130 TGTAATCATGAACGCCAGTCCAACCACGACCATACATAGCAACACCTACTACAATCTTCT 182189
Query 106169 TGGGATCGACGTCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCTT 106228
| |||| || | || |||||| | || || | | | |||||| |||| |
Sbjct 182190 TAGGATTCACTCCCTGCGCCAGCAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTCCT 182249
Query 106229 CGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGTG-TTCGACCAC 106287
|| |||||| ||||| || | | |||||||| || ||| ||| || |||||
Sbjct 182250 TGGGATTCCACGCTGGCGCGTACAATGGCGTTTGATGTCCAAGAG-TGTCATTTGACCAG 182308
Query 106288 GCCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGTTA 106347
|| || || || ||||||||||| | |||||| | |||| ||| ||||| || | | |
Sbjct 182309 GCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCA 182368
Query 106348 TAGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGAAT 106407
|||| ||| || ||||| || | || ||||| ||||| |||||||||||
Sbjct 182369 TAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAATTCGTATTTC 182428
Query 106408 TTGCCCGTTTGCAGTTCTAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACGACA 106467
|| || | | | | ||||| ||||| | || || |||| || || |||
Sbjct 182429 TTACCATTCTTAGCTGAGAGCTCGTCGAGCATCTCACGTAATTCTTTCATCAAACTTACA 182488
Query 106468 TATGTTTCGGCGTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCCGCCTGGA 106527
|| || | || ||| | || | ||| || || |||||||| || ||
Sbjct 182489 TAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTGCCACCAGGG 182545
Query 106528 AATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCCTTTACA 106587
|| |||||||| ||||| || ||||| || |||||||| | | | ||| ||||||||
Sbjct 182546 AACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGAAACTCCTTTACT 182605
Query 106588 GAATTTACAAACACGT-TTCTTTTTTCAACGTCATGCATAAAATAGAAGGGGTCTGATAG 106646
|| | ||||| ||| |||| || |||| | ||| |||| || || | ||
Sbjct 182606 GACTGCACAAAT-CGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAG 182664
Query 106647 CGTCCAACCGCCTATAGACGGAAGCACTTTTAAAT----GCGGATTTGCCAATTTAGCCG 106702
|||||| || || ||||| ||||| | || || | |||| ||| ||||| |
Sbjct 182665 CGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGT---TTTAGT-G 182720
Query 106703 CCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGCG 106762
||| || || |||||||| || ||||||||||||||||| | |||| |||||||| |
Sbjct 182721 ACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAATCCTTTTTGTG 182780
Query 106763 GCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTGC 106822
| || |||| || ||||| |||||||| || || ||||| || || | || || | |
Sbjct 182781 GTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTAC 182840
Query 106823 ATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCAT 106882
| || || | | || ||||| || || |||||| ||| || || || |
Sbjct 182841 AGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTGATGCCGT 182900
Query 106883 CACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACTT 106942
|||||||||| || || ||||| ||||| | ||||| | | ||| || | || |
Sbjct 182901 CACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATAGGTATAC 182960
Query 106943 TATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACAGTTT 107002
||| ||||| || || | ||| || |||||||| || || || || | ||| ||
Sbjct 182961 GATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGCACCCACAACTT 183020
Query 107003 TGTCC---TCTCT-CCTGCCGGGCTCGTTGTTTTCCAGCCATGTGTACTCGAGCGGAGCT 107058
| ||| | | | | || |||| || ||||| | |||| || || || |||| |
Sbjct 183021 T-TCCAGATGTTTGCTTGAACGGCTTATTTTTTTCTCCCAATGTATATTCCAGAGGAGGT 183079
Query 107059 AGATGGCCGCCGTCGGTGTTTGCCAC 107084
| ||| | || ||||| | |||||
Sbjct 183080 AAATGACTTCCATCGGTATCGGCCAC 183105
>seq3424
Length=494560
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||||||||||||||| ||| | || || ||||| || || ||| ||| ||||
Sbjct 289066 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTC 289125
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| |||||| |||||||| || | || || ||
Sbjct 289126 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 289185
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
|||||| ||||| ||||| || ||||| |||||||| || || | ||||||||
Sbjct 289186 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 289245
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762
|||||||| ||||||||| ||||| ||||
Sbjct 289246 TATTCAAAAGGAATCTACTTTGCACTTGGT 289275
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/217 (71%), Gaps = 6/217 (3%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| || ||||| ||| | || || || || || || ||| || |||||
Sbjct 288838 AATGCAAATTTTCGTAAAGACACTGACTGGCAAGACTATCACTTTGGAAGTTGAGCCTTC 288897
Query 28613 AGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATC 28671
|| || | | || | || || |||| || || ||||||||| | ||| |||||
Sbjct 288898 TGATACAATTGAAAATGTTAAAGCGAAAATTCAG-GATAAAGAGGGAATTCCCCCAGATC 288956
Query 28672 AACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CTAAAACTATGGCCGATTA 28729
| || |||||||| ||||| || || || | |||||| | | ||||| | |||||
Sbjct 288957 AGCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGATTA 289014
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766
|||||||| |||||||||||| ||||| | ||| ||
Sbjct 289015 CAACATTCAGAAAGAATCTACTTTGCACCTAGTACTA 289051
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||||||||||||||| ||| | || || || || || || ||| |||| ||||
Sbjct 289522 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 289581
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| ||||| || |||||||| | ||| ||||||
Sbjct 289582 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 289641
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730
|| |||||||| ||||| || || || | |||||| | | ||||| | || ||
Sbjct 289642 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTAT--CTGACTAC 289699
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTA 28763
|| ||||| || ||||||||| |||| |||||
Sbjct 289700 AATATTCAGAAGGAATCTACTTTGCATCTGGTA 289732
Score = 89.7 bits (98), Expect = 4e-13
Identities = 150/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| || |||||||| ||||| || |||||||| || ||| |||| ||||
Sbjct 288611 ATGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCT 288670
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | | | ||| ||| || ||||| || || | || |||||||
Sbjct 288671 GATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAA 288730
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731
|| ||||| || || || || || |||||||||||| | | ||| | | || ||||
Sbjct 288731 CAAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTCT--CAGACTATA 288788
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTA 28766
| || || || ||||||||| ||||| | || |||
Sbjct 288789 ATATCCAGAAGGAATCTACTTTGCACTTAGTTTTA 288823
>seq2787
Length=76071
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| |||||| | || || ||||| ||||| ||| ||| ||||
Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | || |||||| |||||||| || | || ||||||
Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | ||||| ||||||||||| ||||| |||||| | || || | || || |||
Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAAC 40142
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| ||||||||||||||| ||||| | ||| | | ||| |||| || ||
Sbjct 40143 ATCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTAT 40192
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || ||||| |||||| | ||||||||||||||||| ||| ||||||
Sbjct 39504 AAAATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCT 39563
Query 28611 TCAGAGACGGTGGCCGATCT-CAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|| || || | | || | |||| |||| || ||||| || || | || |||
Sbjct 39564 TCCGATACTATTGAAAATGTAAAAGCCAAAATTC-AAGACAAGGAAGGCATTCCTCCAGA 39622
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
|||||| | | || || || || || ||||||||||| ||| | | || ||
Sbjct 39623 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTA 39682
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
||| |||||||||||||||||||| ||| |||||||
Sbjct 39683 TAATATTCAAAAAGAATCTACTCTTCACTTGGTATT 39718
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||||||||| |||||||| || || || ||||||||| ||| ||||| ||
Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || |||| ||||| || || ||||| | ||| ||| |||
Sbjct 40707 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 40766
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | || || ||||| || || |||||||||||| | ||| || | ||||| ||
Sbjct 40767 CAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 40826
Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757
||||| ||||| || || ||||||
Sbjct 40827 ATTCAGAAAGAGTCAACCCTGCAC 40850
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || ||||| || || | || || |||||||| || || || || ||
Sbjct 39734 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 39793
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| ||| ||| ||||||||||| | ||| ||||||
Sbjct 39794 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 39853
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730
|||||| ||||| ||||| || |||||| | |||||| | | | ||| | ||||||
Sbjct 39854 ACAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTAT--CTGATTAT 39911
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
|| |||||||| |||||||| || || | |||||
Sbjct 39912 AATATTCAAAAGGAATCTACCCTACATTTAGTATT 39946
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| ||||| |||| || || ||||||||| ||| |||||| ||
Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | || |||||| ||||||||||| | || |||||
Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
||| | ||||||||||| || || |||||||||||| | || || | || || |||
Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370
Query 28734 ATTCAAAAAGAATCTACTCTGCA 28756
|| || || || ||||| || ||
Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCA 40393
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || |||||||| ||| | || || ||||| || || ||| ||||| |||
Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | || || ||| ||||||||||| | ||| |||||||
Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| | || || || || ||||| || |||| ||| ||| | | || || ||
Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTACAAT 41282
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||| ||||| || ||| ||||| | |||||| | ||||||||||| ||
Sbjct 41283 ATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGGTAT 41332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425382459468111
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |