Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_020485.1
Length=34302
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 255 1e-63
>seq3063
Length=7092
Score = 255 bits (282), Expect = 1e-63
Identities = 308/419 (74%), Gaps = 0/419 (0%)
Strand=Plus/Plus
Query 10869 GTTAGCGCTTATGAGCAGACAGTAAAAGAGGAAATGAACTTTCAGAAAAGCTTTAATCAT 10928
|||| ||| || |||||||| || || |||| || |||||||| ||||||||||| |
Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732
Query 10929 CACGTGCGAACACTTATTGCGCGTGAAGAGGTAGCAATTGGTCTTATGCATTTGTGGGAC 10988
|||||||| || ||| | ||||| || ||||| || || || || |||||| ||||||||
Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792
Query 10989 TTTGTGGAGGCCTATGTTCAAAATCCCAGCAGCAAGCCGTTAACAGCACAACTTTTTCTT 11048
||||| || | ||||| || | ||||||||| | | || || || || |||
Sbjct 6793 TTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 6852
Query 11049 ATTGTTCAGCACAGTAGAGATAATGAAACTTTTAGGGAAGCCATGCTAAACATTGCAGAA 11108
|| || |||||||| || || || || | || ||||| || |||||||||| | |||
Sbjct 6853 ATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 6912
Query 11109 CCGGAGGGCCGTTGGCTTCTTGACTTAATTAACATTTTGCAAAGCATTGTAGTACAAGAG 11168
|| |||||||| ||||| || || || || |||||| |||| ||||| || || || |||
Sbjct 6913 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 6972
Query 11169 CGCTCCCTAAGTTTGTCAGACAAAGTTGCCGCTATTAACTACAGCATGTTGTCTTTGGGC 11228
||| | | || || | ||||| || ||||| |||||||| |||| | | |||||
Sbjct 6973 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 7032
Query 11229 AAATTTTATGCGCGAAAAATTTACAAGTCGCCATTTGTGCCTATTGACAAGGAGGTAAA 11287
|| ||||| || || || || ||| | | || | || || || ||||||||||||||
Sbjct 7033 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Score = 87.8 bits (96), Expect = 4e-13
Identities = 120/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 15038 AACCAAAATGTATGGAGGCGCCAAAAGACGTTCGCCCCAACATCCAGTGCGTGTGCGCGG 15097
|| ||| |||| ||| || || || | || || |||||| |||||||| ||||||||
Sbjct 5 AAGCAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGG 64
Query 15098 ACATTTTAGGGCACCGTGGGGTTCGCATACCAGGGGCCGTACTGGTCGCACCACTGTTGA 15157
|| | | || || ||||| |||| | | ||||| ||||| |||||||| || ||
Sbjct 65 GCACTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGA 124
Query 15158 TGATGTAATTGATAGCGTGGTTGCAGATGCGCGCAACTACCAGCCGAC 15205
||| | ||||| ||||| | || |||||||||||| ||| ||
Sbjct 125 TGACGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCAC 172
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 109639189544112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |