Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_020487.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq3063 374 2e-99 >seq3063 Length=7092 Score = 374 bits (414), Expect = 2e-99 Identities = 338/423 (80%), Gaps = 4/423 (1%) Strand=Plus/Plus Query 11593 GGTGAGCGCGTACGAGGAGACGGTGAAGCAGGAGATGAACTTTCAGAAGAGTTTCAACAA 11652 ||| | |||||||||| |||||||||| |||||||| |||||||| || || || ||||| Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731 Query 11653 CCACGTGCGCACGTTGATCGCGCGCGAGGAGGTGGCCATCGGGCTGATGCATCTGTGGGA 11712 ||||||||||||| | | ||||||||||||||||| || || ||||||||||||||||| Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791 Query 11713 CTTTGTGGAGGCGTTCGTGAGC--AACCCCAACAGCAAGCCTCTGACGGCGCAGCTGCTG 11770 |||||| | ||| | |||| ||||| || |||||||| || | |||||||||| | Sbjct 6792 CTTTGT--AAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTC 6849 Query 11771 CTGATCGTGCAACATTCGCGGGACAACGAGGTGTTTAGGGAGGCGCTGCTGAACATCGCC 11830 || || ||||| || |||||||||||| || ||||| |||||||| ||||| | Sbjct 6850 CTTATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTA 6909 Query 11831 GAGCCCGAGGGTCGCTGGCTGCTGGACCTGATCAACATCCTGCAGAGTATCGTGGTGCAG 11890 ||||||||||| ||||||||||| || |||| ||||| |||||||| || ||||||||| Sbjct 6910 GAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAG 6969 Query 11891 GAGCGTTCGCTGAGTCTCGGGGAGAAGGTGGCCGCCATCAATTATAGCATGTTGAGTCTG 11950 ||||| |||| || | || |||||||||||||| || ||| |||| | |||||| Sbjct 6970 GAGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTG 7029 Query 11951 GGCAAACACTACGCCCGCAAGATTTACAAGAGCCCCTTCGTGCCCATCGACAAGGAGGTG 12010 ||||| |||||||||||||| ||| | | ||| | ||| ||||| ||||||||||| Sbjct 7030 GGCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTA 7089 Query 12011 AAG 12013 ||| Sbjct 7090 AAG 7092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117753974294400