Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 187 1e-42
>seq3345
Length=207354
Score = 187 bits (206), Expect = 1e-42
Identities = 308/442 (70%), Gaps = 2/442 (0%)
Strand=Plus/Minus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
|| ||| | | |||||| | |||||| ||||| | |||||||| | ||||| ||||||
Sbjct 112156 TCTACTCTTTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTC 112097
Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040
|||||||| || || ||| ||||| |||| ||| ||||| ||||| || |||| |||||
Sbjct 112096 ATTTCTTCCTTACCCGTG-TTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCA 112038
Query 26041 TGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCT 26100
|| |||||||| || ||||| ||| | ||| ||||||||||||||| |||||
Sbjct 112037 AGGCTCTAAATAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCT 111978
Query 26101 TGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCT 26160
||||| | || | ||| |||||||||| |||| ||| | || | || || ||||
Sbjct 111977 GGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCC 111918
Query 26161 ATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCA 26220
| || | || || | ||| || || | ||| | ||| || |||||||| |
Sbjct 111917 AGCTATGTAAGAACCCTGAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGA 111858
Query 26221 TTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTT 26280
||| ||||| |||||| | | | ||||| ||||| |||| |||||||| ||||
Sbjct 111857 TTTAGAAATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTT 111798
Query 26281 CATTCCTAATAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGT 26340
||| ||| | || || || || | |||| | | ||| ||| |||| |||
Sbjct 111797 CATAGCTATAAGGAAGCAGGAGGAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAATAGTGT 111738
Query 26341 CGGTGTAGCATGAGTATAATAT 26362
|| | ||||| ||| |||||
Sbjct 111737 AGGGCTTGCATGTGTAAAATAT 111716
Score = 125 bits (138), Expect = 4e-24
Identities = 353/529 (67%), Gaps = 16/529 (3%)
Strand=Plus/Minus
Query 24645 CGATATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAA 24701
|| |||||| |||| |||| ||||| || |||| | |||||||||| || | |||
Sbjct 113399 CGTTATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAA 113340
Query 24702 GATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTT 24761
| || |||||||| ||||| || | | |||||| ||| ||||| || || || ||||
Sbjct 113339 G-TAGTACATTCCTGTTTTTAAACCCATTTTCCAAGCGTGGAAATGAATCGACGTAAGTT 113281
Query 24762 TTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTT 24821
|| || ||| | | | | | | ||| | |||||| |||| | |||| |
Sbjct 113280 TTCCATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTC 113221
Query 24822 GTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATC 24881
|||||| || || | | ||| ||||||| || || || | | ||||||||
Sbjct 113220 CTCTATCAGCTGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACA 113161
Query 24882 TCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AA 24939
||| |||| || | ||||| || |||| | ||| | |||||||| || | | ||
Sbjct 113160 AATCTCTTATTTCTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAA 113101
Query 24940 TA-GATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAG 24997
|| |||| | |||||| ||| | || | |||| ||| | | |
Sbjct 113100 TAAGATT---TTTCATATCTTCATCCCACAAATCAGCCCGAGTCAA-ATCAGTCAGAAGA 113045
Query 24998 TGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA--GTTTGAAG 25055
|| | || | | | |||||||||||| || |||||||| ||| ||| ||||| |
Sbjct 113044 TGATGGTTCACTACAGGAAATTCTCCAGATAAGACTCTTCT--TTGGTAAATATTTGATG 112987
Query 25056 TGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTA 25115
| || ||||||||| ||||| | || || | ||||| | |||||| || || ||||||
Sbjct 112986 TAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTG 112927
Query 25116 ATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164
||||| ||||| ||||| | |||||||| ||| | |||| || |||
Sbjct 112926 GAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTT 112878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253026711367175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |