Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_021168.1
Length=34391
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 352 6e-93
>seq3063
Length=7092
Score = 352 bits (390), Expect = 6e-93
Identities = 330/420 (79%), Gaps = 0/420 (0%)
Strand=Plus/Plus
Query 10586 GTTACCGCGTACGAGCAGACGGTGAACGAGGAGCGAAACTTCCAAAAAAGCTTTAACAAT 10645
||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||
Sbjct 6673 GTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAAC 6732
Query 10646 CACGTTAGGACCCTGATTGCGCGAGAGGAGGTGGCCACGGGACTGATGCATCTGTGGGAT 10705
||||| | || || | ||||| ||||||||||| | ||||||||||||||||||||
Sbjct 6733 CACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGAC 6792
Query 10706 TTCATAGAGGCGTACGTACAGAATCCTACTAGCAAGCCGTTGACGGCGCAGCTGTTCTTG 10765
|| || ||| | || || || | |||||||||| | | ||||||||||||| |
Sbjct 6793 TTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 6852
Query 10766 ATAGTTCAGCACAGTCGCGACAACGAAACGTTTCGCGAGGCCATGTTAAACATCGCGGAG 10825
||||| |||||||| | |||||||| | || | || || || ||||||| | |||
Sbjct 6853 ATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 6912
Query 10826 CCCGAGGGTCGGTGGTTGCTGGATCTGGTGAACATCTTGCAAAGCATAGTAGTTCAGGAG 10885
|||||||| || ||| |||| ||| || | ||||| |||| |||||||| || ||||||
Sbjct 6913 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 6972
Query 10886 AGGAGCCTGAGCTTGGCCGATAAGGTAGCGGCTATTAACTACTCAATGCAGAGTCTGGGT 10945
| ||| ||||| |||| || ||||| || || |||||||| || |||| ||||||||
Sbjct 6973 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 7032
Query 10946 AAATTTTACGCCCGCAAAATCTACAAGAGTCCATACGTTCCCATCGACAAAGAGGTAAAG 11005
|| |||||||||||||| || ||| | | || ||||||||||| ||||| |||||||||
Sbjct 7033 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 7092
Score = 93.3 bits (102), Expect = 9e-15
Identities = 138/195 (71%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 15436 CGCACCGCGGCGCAGGGTGCGGTGGAAAGGGCGGCGTGTCCAGCGCGTGCTGAGACCCGG 15495
||| || |||| |||| | ||||||||| || || || || || || |||||||
Sbjct 791 CGCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGG 850
Query 15496 CACCACGGTGGTGTTTACCCCGGGACAGCGTTCGGCTGTGCGGGGTTTCAAGCGGCAGTA 15555
|||||| || || ||||| || || |||| || | || | |||||| |||
Sbjct 851 CACCACCGTAGTTTTTACGCCCGGTGAGCGCTCCACC---CGCACCTACAAGCGCGTGTA 907
Query 15556 CGATGAGGTGTACGGCGACGAAGACATTTTGGAGCAAGCCGCGCAGCAAATTGGAGAGTT 15615
|||||||||||||||||||| ||| | | ||||| ||| ||| | || |||||
Sbjct 908 TGATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTT 967
Query 15616 TGCGTACGGAAAGCG 15630
||| |||||||||||
Sbjct 968 TGCCTACGGAAAGCG 982
Score = 89.7 bits (98), Expect = 1e-13
Identities = 153/222 (69%), Gaps = 9/222 (4%)
Strand=Plus/Plus
Query 14702 CAAGATGTACGGCGGCGCCAAGAGGCGTTCTAGTCAGCATCCGGTGCGCGTCCGAGGTCA 14761
|||||||| ||||| || |||| ||| || || || || |||||||| || || ||
Sbjct 8 CAAGATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCA 67
Query 14762 CTACCGCGCTCCCTGGGGGGCCTATAAGCGCGGACTGTCCGCCCGCACGGCCGTGGATGA 14821
||||||||| |||||||| || | || ||||| | | | ||||| |||| |||||
Sbjct 68 CTACCGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGATGA 127
Query 14822 CACTATCGACGCCGTCATCGCCGACGCCCGACAGTACAAACC--TGCC-------GTGTC 14872
| | || ||||| || | | || || || | |||| || ||| |||||
Sbjct 128 CGCCATTGACGCGGTGGTGGAGGAGGCGCGCAACTACACGCCCACGCCGCCACCAGTGTC 187
Query 14873 CACAGTGGATTCCGTAATAGACAGCGTGGTGGCCGGAGCCCG 14914
||||||||| | | || | | ||||||| |||||||||
Sbjct 188 CACAGTGGACGCGGCCATTCAGACCGTGGTGCGCGGAGCCCG 229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 109923974971074
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |