Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq3424 149 9e-31
seq2787 141 1e-28
seq1351 125 1e-23
>seq3424
Length=494560
Score = 149 bits (164), Expect = 9e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | |||||||||||||| ||||||||||| || ||||| || | ||||
Sbjct 289979 ATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACCTTGGAAGTGGAGGCTTCT 290038
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| || || || || ||||| || |||||||| |||||||| |||
Sbjct 290039 GACACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 290098
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| |||||| ||||| ||||| || |||||| | || || || || ||||||
Sbjct 290099 CAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAAT 290158
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| || ||| | || | |||||||| || | ||||||| ||
Sbjct 290159 ATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 290205
Score = 138 bits (152), Expect = 2e-27
Identities = 146/191 (76%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| |||||||| ||||| ||||| || | |||
Sbjct 289066 AATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTC 289125
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| || ||| || || ||||| ||||| ||||||||||| ||||| || ||
Sbjct 289126 TGATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCA 289185
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | |||| ||| || || ||||| |||||| | || | |||||||||||
Sbjct 289186 ACAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAA 289245
Query 156002 TATATCCAAAG 156012
||| || ||||
Sbjct 289246 TAT-TCAAAAG 289255
Score = 136 bits (150), Expect = 6e-27
Identities = 140/183 (77%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| || ||||| ||||| ||||| |||| |||
Sbjct 289522 AATGCAAATATTTGTAAAGACACTGACTGGCAAGACTATCACATTGGAAGTGGAAGCTTC 289581
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| ||| || || ||||| || |||||||| ||||| || ||||| ||
Sbjct 289582 TGATACAATTGAAAATGTTAAGGCGAAAATTCAGGATAAAGAGGGCATTCCCCCAGATCA 289641
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || |||||||| |||||| | || |||| || || ||
Sbjct 289642 GCAAAGACTTATTTTTGCTGGAAAGCAGCTTGAAGATGGACGCACACTATCTGACTACAA 289701
Query 156002 TAT 156004
|||
Sbjct 289702 TAT 289704
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | || ||| ||||||| || ||||| ||| | ||||| || ||
Sbjct 289750 AATGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTC 289809
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||| | || ||| || || ||||| |||||||| |||||||| |||||||| ||
Sbjct 289810 TGACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCA 289869
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||| | |||| ||| || ||||| || || ||| | || ||||||| || ||
Sbjct 289870 ACAAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTATCAGACTACAA 289929
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| ||||| | || | ||||||||
Sbjct 289930 TATTCAGAAAGAATCTACTTTACATTTAGT 289959
>seq2787
Length=76071
Score = 141 bits (156), Expect = 1e-28
Identities = 125/156 (80%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||||||| | ||||||||||| ||||| |||||||| |||| ||||
Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| |||||| |||||| ||||| ||||||||||| ||||| || |||
Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
||| | | |||| ||| || ||||| | ||||||
Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGAT 40118
Score = 131 bits (144), Expect = 2e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | ||||||||||||||||| || ||||| | ||||| ||| |||
Sbjct 40647 ATGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCT 40706
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || || || ||| ||||||||| ||||| || ||||| || ||||| |||
Sbjct 40707 GACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAA 40766
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| ||| || ||||| | |||||| | ||||| || ||||| |||
Sbjct 40767 CAACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAAT 40826
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTG 156032
|| |||||| | || || || ||||||
Sbjct 40827 ATTCAGAAAGAGTCAACCCTGCACTTAGTG 40856
Score = 118 bits (130), Expect = 2e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||||||| | |||||| | ||||||||||| || || || ||||| || ||
Sbjct 40874 AATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATC 40933
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| || ||| ||| || |||||||| ||||| || |||||||| ||
Sbjct 40934 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 40993
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||| | | || | || ||||| || || |||||| | | || | || || || ||
Sbjct 40994 ACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 41053
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGT 156031
||| |||||| |||| ||||| || ||
Sbjct 41054 TATCCAGAAAGAGTCGACCCTTCACTTGGT 41083
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || ||| |||| || |||||||| ||||||||||| ||| ||
Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||| || ||| || || ||||| ||||| || || || ||||| |||
Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | |||| || || |||||||| || ||| | ||| | || || || |||
Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTACAAT 41282
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| |||||| | || | || ||||| ||| | ||| |||| |||
Sbjct 41283 ATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGGT 41330
Score = 104 bits (114), Expect = 3e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
|||||| || ||| |||| || | || |||||||| || || ||||| || || ||
Sbjct 39734 AATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTC 39793
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|| | ||| ||| ||||| || || ||||| ||||| || || || ||||| ||
Sbjct 39794 CGACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCA 39853
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||| || | |||| ||| || || || || |||||| | | || ||||| ||||||||
Sbjct 39854 ACAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAA 39913
Query 156002 TATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034
||| || ||| || | || || |||||||| ||
Sbjct 39914 TAT-TCAAAAGGAATCTACCCTACATTTAGTATT 39946
Score = 93.3 bits (102), Expect = 6e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||||||| | || ||| | || || || ||||| || | || || || |||
Sbjct 40419 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGAGCCATCT 40478
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | ||| ||| || || ||| || ||||||||||| || || || ||||| |||
Sbjct 40479 GACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCAA 40538
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| | | || | ||| || |||||||| |||||| | || | || || || ||
Sbjct 40539 CAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAAC 40598
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGT 156031
|| |||||| | || |||||||||||
Sbjct 40599 ATCCAAAAAGAGTCTACCCTTCATTTAGT 40627
>seq1351
Length=825266
Score = 125 bits (138), Expect = 1e-23
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 18413 TCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTT 18472
|| || | ||| ||||||| ||||| ||||| ||||| ||||| || ||||| | ||
Sbjct 602212 TCCTTAGGATCCCTTATATATGTGTCAATTAATAAAGAGTACATCTCTGAATGAACATTT 602271
Query 18473 TCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAA 18532
|||||||| || ||||||| ||| || | || || || | ||||| ||| ||
Sbjct 602272 TCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGTGAA 602331
Query 18533 AATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACA 18592
|| | || ||||| ||||||||||| ||||| |||| || || || ||||| ||||||
Sbjct 602332 AAACGCTCCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAAACA 602391
Query 18593 TATTTAATGAAATGTTTTTCATTATCCTT 18621
| || || |||||||| ||| ||| ||
Sbjct 602392 TGCTTGATAAAATGTTTCTCACAATCTTT 602420
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 17869 GTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCAT 17928
||||||||| ||||| ||||| ||||||||||| || ||||||||||| || | ||||||
Sbjct 599464 GTATTCTCCAACTTTCTTCTCAAAGAAATTTGTTTTGCCTTCCAATGAGATGAGATTCAT 599523
Query 17929 AAAATCAAATGGATT 17943
|||||| ||||||||
Sbjct 599524 AAAATCGAATGGATT 599538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731832579544400
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