Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq3366 167 7e-36
seq3345 134 4e-26
seq2167 129 2e-24
>seq3366
Length=221407
Score = 167 bits (184), Expect = 7e-36
Identities = 340/497 (68%), Gaps = 10/497 (2%)
Strand=Plus/Minus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||||||||| ||||||| | ||| ||| |||||| || || ||||||| || ||
Sbjct 83557 CCTATCAAATCTACCAGGCCTTAATAAGGCTTTGTCTAAAATGTCCACTCTGTTAGTAGC 83498
Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966
|| ||||| |||| | || | | ||| || || |||||||| || || |||
Sbjct 83497 AGCTAATACTACAACA--TTGGTTGTTGTATTGAAACCATCCATTTCCACTAGAAGCTGA 83440
Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttt 289026
||||| || | ||| ||| || ||||| || | | | || ||| |||||
Sbjct 83439 TTAAGAGTATTTTCTTGTTCTGAATG---ACCTCCAAAA-CTTCTGCCTC-CTC-TTTTT 83386
Query 289027 ttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATT 289086
||||||||||||| ||||| ||||| || | | ||| |||| || || | || ||
Sbjct 83385 CTACCAACAGCATCTATTTCATCAATAAATAATATACAGGGAGCATGTTTCCGTGCCATA 83326
Query 289087 GCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAA 289146
| || | || || || | || | |||| ||||||| ||||||||| ||| || |||
Sbjct 83325 GAGAACATATCCCTGACCCTAGAGGGACCAACACCAACAAACATTTCTAAAAACTCTGAA 83266
Query 289147 GCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206
| |||||| ||| || | ||||| || || || ||| ||| | || ||||| ||
Sbjct 83265 CCTGATACTGTAATAAAGGGAACATTAGCCTCTCCAGCTGTTGCTTTAGCTAGAAGAGTT 83206
Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGAC 289266
||||| |||||||| ||||| ||||| ||||||| || | ||| || || |
Sbjct 83205 TTACCAGTTCCAGGGGGTCCTGTTAATAAGGCTCCCTTAGGAATTTTAGCTCCTAAATCA 83146
Query 289267 TTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCA 289326
|||||| || |||| |||| || || | |||| |||| || |||| ||| || ||
Sbjct 83145 ATATATTGCTGAGGGTTCTTCAAGAAATTGACAAATTCCATAATTTCAATTTTAGCTTCC 83086
Query 289327 TCACATCCTGCTACATC 289343
||||| || || |||||
Sbjct 83085 TCACAACCAGCAACATC 83069
>seq3345
Length=207354
Score = 134 bits (148), Expect = 4e-26
Identities = 579/900 (64%), Gaps = 38/900 (4%)
Strand=Plus/Minus
Query 155475 GGGTAAAAATTCACATCAATAATGTTATTTAAATTT---GTAACCAATACCTTGGTTACG 155531
|| |||||||| |||||||||| || ||||||||| || || ||| ||| || |
Sbjct 112585 GGATAAAAATTAACATCAATAACTTTGTTTAAATTTTGAGTTAC-AAT--CTTTGTGATT 112529
Query 155532 TCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACATACCAAGACCAATA 155591
||| |||||| | | | |||| | |||| ||| |||||||| ||| | ||
Sbjct 112528 TCTTTTAATTTTTTAAAATTAAATCTATTATTTTCA---ACAAACATGTTAAGTGCTATG 112472
Query 155592 GACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCAC 155651
|| || || || || || || || | || |||||| |||| |||| |||
Sbjct 112471 GAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAA 112412
Query 155652 AGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCC 155711
|| || || || || ||||| | ||| || || ||| || |||||||||||||||
Sbjct 112411 AGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTACAAGCATCC 112352
Query 155712 TTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAAT---CTTTAGCCAG 155768
|| || | |||||||| || || ||||| | || || || | ||| ||| |||
Sbjct 112351 TTATACAACATGTATGGTGTACCAGTCTCTACTTGGGCTTCTATAATTGACTT---CCAT 112295
Query 155769 AGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTT--CATATACA 155826
| || | || | | ||| || | ||| ||| |||||||| ||||||
Sbjct 112294 AACTCTTGAGCTCTGACTTGTTTTATAAATCGTTTTTCTTCTTCATATTTGGCATATA-- 112237
Query 155827 GCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAA 155884
|||| || ||||| || | || ||| || ||||| || | || || || |
Sbjct 112236 --GTTCTTCAAATTCCTCTCCAAAGCAGTCAGCGAGGCCAGGACAATCATGAGGACACAT 112179
Query 155885 CAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATACATCACTCGCCCAAATA 155942
|| ||||| || || || || || || |||||| | ||| ||| |
Sbjct 112178 GAGACTCCAAACTTCAT--CCTTTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAG 112121
Query 155943 GCATAGAAAAGGTCCCTTGCCTTTGACTCCT--CATCGCCGTGATTCTTCCGTAGCTCTA 156000
||||| || || || || || | | | | || | | ||||| |||||| || || |
Sbjct 112120 GCATAAAACAGTTCTCTAGC-TCTCATTTCTTCCTTACCCGTG-TTCTTCTTTAAATCCA 112063
Query 156001 AGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCT 156060
||||||| || || | ||| ||||| | ||| || ||||| ||| | |
Sbjct 112062 AGAATTCAAATATGTCTGCATGCCAAGGCTCTAAATAAATCGCAAATGCACCGGGACGTT 112003
Query 156061 TG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAA 156117
|| ||||| ||||||||||| | ||||| || || | || | | ||| || | |
Sbjct 112002 TGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTATACACTCTCAACATTGGCACTA 111943
Query 156118 TACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATT--ATG 156175
|||||| || ||||| || || || | ||||| ||||| || |||
Sbjct 111942 GACCATTCGAGACCCCATTAGTGCCAGCTATGTAAGAACCC--TGAGCTCTGATGCAATG 111885
Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235
|||||| || || ||||| | ||||||||||| || |||| |||| |||||
Sbjct 111884 TGTATGTAAACCTATGCCACCAGCAGATTTAGAAATTAATGCACATTGTTTTAAAGTATC 111825
Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295
|||||||||||||| ||| |||| ||| | || || |||| || | || ||
Sbjct 111824 AAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGGAGGAAAGCTGCGG 111765
Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| ||||| | || |||||||||||| ||||||| ||||||| || | |||||
Sbjct 111764 CCGCGGTGTGGCTGCTGAGAATAGTGTAGGGCTTGCATGTGTAAAATATTTCTCTGACAT 111705
>seq2167
Length=747338
Score = 129 bits (142), Expect = 2e-24
Identities = 209/295 (71%), Gaps = 8/295 (3%)
Strand=Plus/Plus
Query 302553 ATCATAACCAATCATAA-TGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAG 302611
||||||| | ||||| || || ||||| ||| ||||||||||||||||| |||||||
Sbjct 219234 ATCATAATGTACCATAACTGACT-CCATAGCCTTTATTAAACGACGCTGAATGTAACCAG 219292
Query 302612 TTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGA 302671
|| || ||||||||||| |||||||| ||||| ||||||| ||||| || |||||
Sbjct 219293 TTTCAGCAGTTTTTACAGCGGTATCAATGAGACCTTCACGACCTCCCATGGCGTGGAAAT 219352
Query 302672 ATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGG 302731
| | ||| ||| | || ||| | || | || |||||||| | | || |
Sbjct 219353 AAAACTCAGAGGGTGTCAAGCCGGCAAGGTATGAATTTTCGACGAAACCTCTAGATTCTG 219412
Query 302732 G--CG-AATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGA 302788
| || ||||||| ||| | || ||||||| || || || | | ||| | || |
Sbjct 219413 GACCGTAATCGTC---TTTGATGAAATGTGGCAATGTTCTTTTACGAAAACCGAACGGAA 219469
Query 302789 TACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
|||||||||| ||||||||||| || || | || | ||| | ||| || || ||
Sbjct 219470 TACGCTTTCCTTCAACGTTCTGTTGCCCTACACAAGCAATAACCTGTGAGATGTT 219524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471736342330133
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |