Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3829 129 7e-24
seq3103 127 2e-23
seq3494 96.9 4e-14
>seq3829
Length=1076
Score = 129 bits (142), Expect = 7e-24
Identities = 152/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| |||||| ||| | || | ||||| |||||| | ||| | | ||
Sbjct 946 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 887
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||||| | |||||| |||| || || || ||||||| | |||| || |||| |
Sbjct 886 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 827
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| ||||
Sbjct 826 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 767
Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548
| || || |||||||| |||||||||
Sbjct 766 GGACTTGTTTGAGCACTTTGTAGATG 741
>seq3103
Length=1060
Score = 127 bits (140), Expect = 2e-23
Identities = 153/207 (74%), Gaps = 1/207 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| |||||| |||||| ||| | || | ||||| |||||| | ||| | | ||
Sbjct 322 GCTTGGCCAACTCGCCGGGCAACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGA 263
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
||||| | |||||| |||| || || || ||||||| | |||| || |||| |
Sbjct 262 TCGTGGACCTCTTGTTGTAGTGGGCGAGTCGCGACGCCTCGGCGGCGATACGCTCGAAAA 203
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||||||| || ||||||||||||| ||||||| |||| ||||||| || ||| ||||
Sbjct 202 TGTCGTTCACGAACGAGTTCATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGT 143
Query 1254523 GCACCTGCTTGAGCACC-TTGTAGATG 1254548
| || || ||||||||| |||||||||
Sbjct 142 GGACTTGTTTGAGCACCTTTGTAGATG 116
>seq3494
Length=1266558
Score = 96.9 bits (106), Expect = 4e-14
Identities = 142/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407
|| || |||||| | | || || || |||| |||||| | || | || ||||||
Sbjct 401917 GCGAGCTCGCCGGGAAGGAGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTT 401976
Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467
| |||||| |||||||||| ||| ||||||| |||| || || | || |||
Sbjct 401977 GACCTCTTGTTGTAGTGCGCCAGGCGGGACGCCTCGGCCGCGATACGTTCAAAAATATCG 402036
Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527
|||||||| || ||||| | ||||| | ||| | ||||| || ||| ||||| |||
Sbjct 402037 TTGACAAAGGAATTCATTATAGACATAGCCTTACTCGAGATCCCAGTGTCCGGGTGAACC 402096
Query 1254528 TGCTTGAGCACCTTGTAGATG 1254548
||||| | ||| ||||| |||
Sbjct 402097 TGCTTCAACACTTTGTAAATG 402117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106785583280953
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