Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3345 343 1e-89 seq3463 241 1e-58 seq1305 152 5e-32 seq2787 147 2e-30 seq3424 143 2e-29 >seq3345 Length=207354 Score = 343 bits (380), Expect = 1e-89 Identities = 1163/1799 (65%), Gaps = 38/1799 (2%) Strand=Plus/Minus Query 138153 TTTATCTACAGTAAACTTTATGGCATCAGCGGCTGGTTTCGTTCTCAGATAATACATTCC 138212 ||| ||||||||||||| || |||| || |||||||| || | | || |||||||| Sbjct 113387 TTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAGTACATTCC 113328 Query 138213 CGTTTTT-AACCCATTTTCCCAGGCGTACATGTGTATCGAAGTGAGTAACGCGTAAGTCG 138271 |||||| |||||||||| ||| |||| | || ||||| || ||| | || | | Sbjct 113327 TGTTTTTAAACCCATTTT-CCAAGCGTGGAAATGAATCGACGTAAGTTTTCCATAGTTAG 113269 Query 138272 GTTTCGCCAGAAATATGTTAAACGATTGACTCTGATCGATGAAAGCGCCTCGATCAATGG 138331 |||| || | | ||||||||| |||||||| || || || ||||| |||| |||| | Sbjct 113268 GTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAAAGCTCCTCTATCAGCTG 113209 Query 138332 CCATGTTAATTAAATTTTTACTTTTCATCTCCCACACGGTCTTGTATAGATCACGAATAT 138391 |||| | || | |||| | |||||||| ||||| ||||| | ||| | || | Sbjct 113208 CCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTT 113149 Query 138392 GTCGCGGTATTGTTGCAATATTTTGAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCA 138451 | || ||| || |||| | ||| || || ||| || || ||||| ||| Sbjct 113148 CTTTAGGAATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAGATTTTTCA 113089 Query 138452 TGTCATCGTTGTACAGATTCAACTTGA-TCAAGTCGTTTATCAGATATCTGTTTATGACC 138510 | || || | ||| | ||| | || |||| || | | |||| ||| | || Sbjct 113088 TATCTTCATCCCACA-AATCAGCCCGAGTCAAATCAGTCAGAAGATGATGGTTCACTACA 113030 Query 138511 TGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAACGAT 138570 ||||||| || | || |||| | |||||| || || || || ||||| ||| Sbjct 113029 GGAAATTCTCCAGATAAGACTCTTCTTTGGTAAATATTTGATGTAAAGGGTTCAAAAGAT 112970 Query 138571 TCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAA 138630 || |||| || ||||| || || || | || |||||||| || | ||| |||||| Sbjct 112969 TCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATTGGAGCTATCAATAGAGAA 112910 Query 138631 TTCCGTAAACC--GTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATCGC 138688 || || ||||| || ||| || ||| ||||| | | ||||||||| | || Sbjct 112909 TTGCGCAAACCATGTTTTGCT--ATCTTTTCTTTGAGGGCAGCCCAGTCCCAAAGGTCTG 112852 Query 138689 TAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTCGT 138748 |||| |||||| ||||||||| ||||| | || || ||||| ||||| |||| | Sbjct 112851 TAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTTGCTGGACTCCCTTGAT 112792 Query 138749 ACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCATAGT 138808 | | |||| |||| | || || || || || || || | |||||||| | Sbjct 112791 ATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCTTCTAATGCACCATAAT 112732 Query 138809 AAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCATGC 138868 |||| ||||| || || |||||||| | | || | | || ||||| | || | Sbjct 112731 AAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCACTTTCGTAAGAAATTC 112672 Query 138869 GGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGCGCA 138928 | || | ||||| || |||| || || || || | || | ||| | ||| | || Sbjct 112671 TCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCAATAGGTCTATGTCTCA 112612 Query 138929 GATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988 |||||| | |||||| | || ||||||| | || ||||| || | ||||||||||| Sbjct 112611 TATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAATTAACATCAATAACTTTGTTTAAAT 112552 Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGTGCCCCCGTTGT 139048 || | || | ||| || | | |||||| || ||||| || | || | Sbjct 112551 TTTGAGTTACAATCTTTGTGATTTCTTTTAATTTTTTAAAATTAAAT------CTATTAT 112498 Query 139049 CGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTT 139108 || ||||| |||| | || || || | ||||||||| ||||||| Sbjct 112497 ---------TTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTT 112447 Query 139109 CGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTA 139168 | || |||||| |||| || | || | ||| ||||| || || || || | Sbjct 112446 CATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAA 112387 Query 139169 AATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAG 139228 ||||| |||||| || |||| |||||||||||| || || | ||| || ||||| |||| Sbjct 112386 GATTTTTTTGATTACTCTTTCTGTTACAAGCATCCTTATACAACATGTATGGTGTACCAG 112327 Query 139229 TTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGT 139288 | || ||||| | |||||||| | || | || || |||| | ||| | | Sbjct 112326 TCTCTACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTCTGACTTGTTTTA--T 112269 Query 139289 AAA--GTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTC 139346 ||| ||| || || || || | || ||||| || ||| || || || ||| Sbjct 112268 AAATCGTTTTTCTTCTTCATATTTGGCATATAGTTCTTCAAATTCCTCTCCAAAGCAGTC 112209 Query 139347 AGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCG 139406 || || | |||| | | |||||||||||| ||| || | | | | || | Sbjct 112208 AGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAAACTTCATCCTTTTCTACTCT 112149 Query 139407 CCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTC 139466 |||| |||||||| || ||||| || || | | || || | || || | ||||| Sbjct 112148 TTTCATAAACAGATCTGGTATCCATAAGGCATAAAACAGTTCTCTAGCTCTCATTTCTTC 112089 Query 139467 CGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAG 139526 | |||| |||| || | | | ||| ||||| | ||| || ||||| || || | Sbjct 112088 CTTACCCGTGTTCTTCTTTAAATCCAAGAATTCAAATATGTCTGCATGCCAAGGCTCTAA 112029 Query 139527 ATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATT 139583 ||| || || | ||| || |||||| ||||||||||| || | || ||| ||| Sbjct 112028 ATAAATCGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATT 111969 Query 139584 ATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG-- 139641 || | || | |||||| ||| | ||||| ||| || || |||| | ||| Sbjct 111968 GTTATACACTCTCAACATTGGCACTAGACCATTCGAGACCCCATTAGTGCCAGCTATGTA 111909 Query 139642 -GGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGA 139700 | || | |||||| || | |||| || | || || || || || |||| || Sbjct 111908 AGAACCCT---GAGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCAGATTTAGA 111852 Query 139701 TATTAAAACGCAATCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGT 139760 ||||| | || | ||| || || | |||||| ||||| ||||| | ||| | Sbjct 111851 AATTAATGCACATTGTTTTAAAGTATCAAAAATACCTTCAATGCTATCGTCTTTCATAGC 111792 Query 139761 GACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACT 139820 | || ||||| || ||||| ||||| | ||| | |||| || || ||||| || Sbjct 111791 TATAAGGAAGCAGGAGGAAAGCTGCGGCCGCGGTGTGGCTGCTGAGAATAGTGTAGGGCT 111732 Query 139821 CGCGTGCGT-GAACATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATAT 139879 || || || || |||| | | ||||||| | || || | ||| || || |||| | Sbjct 111731 TGCATGTGTAAAATATTTCTCT-GACATCATATTATAAGTATTGATTGCACTATCAATGT 111673 Query 139880 CCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACC 139938 | || || || || | ||||||| ||| ||||| ||||| || ||| || ||| Sbjct 111672 CTTCACCATGAATGCCTATGGAGACTCTCATAAGCATGTGTTGAGGCCTTTCAGCTACC 111614 >seq3463 Length=282612 Score = 241 bits (266), Expect = 1e-58 Identities = 487/716 (68%), Gaps = 9/716 (1%) Strand=Plus/Plus Query 56458 TTGGACCAAGCGCCTTTGAAATCGTAATTCATCAAAAATATTTTGTCAAGATACGTTTGC 56517 || ||||| || || ||||| |||||| ||||||| || || | || | ||| |||| Sbjct 182300 TTTGACCAGGCTCCCTTGAAGTCGTAACTCATCAAGAAAATATGATCCATATAATTTTGA 182359 Query 56518 GCCTCGTCGTAATCGACGACGGCTATCTTATCGTATCCCGCGCTTATCGCGCTCGTGAGT 56577 |||| | | || || || || || ||||| |||| ||||| || || || | | Sbjct 182360 GCCTTGCCATAGTCTACAACTTGGATTTTATCCCATCCAGCGCTAATAGCAGAAGTTAAT 182419 Query 56578 TGGAATTTACGACCCGTTTCGATCTCCAA-CTGGTCGAGCATATGTCTCAACTCCTTCAA 56636 | | |||| ||| | | | || | || ||||||||| | | || || |||| Sbjct 182420 TCGTATTTCTTACCATTCTT-AGCTGAGAGCTCGTCGAGCATCTCACGTAATTCTTTCAT 182478 Query 56637 CAGAATCACATAAGTCGACCCGTCGTGTGCTGGATCACCTAA--CAGGGGATTGGCGCCT 56694 || | | |||||| || || | || || | ||| | ||||| || || ||| Sbjct 182479 CAAACTTACATAACAATCACCATCTTCTG--GGCT-ACCGAGGTCAGGG--TTAGCACCT 182533 Query 56695 TTGCCACCCGGAAACTCCCAGTCGATGTCGACTCCATCGAAGAATTTCCACGTTAGTAGA 56754 |||||||| || |||||||| ||||| || || ||||||||||||||||| ||||| ||| Sbjct 182534 TTGCCACCAGGGAACTCCCAATCGATATCAACACCATCGAAGAATTTCCATGTTAGAAGA 182593 Query 56755 AACTCACGAACGGAATCGATGAATATTTGACGTTTCGTGTTGTCGTGTAAAAAGTAAAAC 56814 ||||| || || | | ||| | | || | ||||| ||||||| | || Sbjct 182594 AACTCCTTTACTGACTGCACAAATCGTGTTCTCTTAGATTTGTCAACTAAAAAGAAGAAA 182653 Query 56815 GGATCCGAGAGTGTCCAACCGCCTATCGACGGGAGCACTTTCAGATGCGGGTTCGCCTTT 56874 ||||| | || ||||| || || || || || || | |||| | ||| || | | Sbjct 182654 GGATCGGCAAGCGTCCACCCACCAATAGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGT 182713 Query 56875 TTGATAGCCATTATCTGCCCGAAATTGCCCTTGTACGGTTCGTTCCAAGCGGACACTCCT 56934 || | | ||||| || || || ||||| ||||| || |||||||| | |||| |||| Sbjct 182714 TTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAAGGCTCGTTCCATGAAGACAATCCT 182773 Query 56935 TTTTGTGGTTTCTGTAGTGCGGCCCACGGATCGTGTATGGACACCTTGAAATCAGCACGA 56994 ||||||||||| |||| ||| ||||| |||||||| || || || ||||| || |||| Sbjct 182774 TTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGG 182833 Query 56995 TTCGAACACGAGCGTTGCAACGCTTCGAAACTACCCGTGATCGTTTTGAGACTATCGTTG 57054 ||| || || || | |||| |||||| || |||| ||| | |||||| ||| Sbjct 182834 CCGCTACAGGACCGCTGTAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAACTATCATTG 182893 Query 57055 ATGCCGTCGCCGCCACAGATCGGTATGAAACCGTATAAGAGATGCGACAGATTGGGCACT 57114 |||||||| ||||| || || || || || ||||| | | ||| | ||||| || | Sbjct 182894 ATGCCGTCACCGCCGCAAATTGGGATAAAGCCGTAGAGCAAATGAGTAAGATTAGGTATA 182953 Query 57115 GGCACCTTGTCGGCTGCAAAATTCCTACCGTATACGCCCCATTCGACGAAATATGC 57170 || | || | | || |||||| || || |||||||| ||||| || || Sbjct 182954 GGTATACGATCCACGGGGAATTTCCTAGGATAGACACCCCATTCTACGAAGTAGGC 183009 >seq1305 Length=286731 Score = 152 bits (168), Expect = 5e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||| || || | || || || || |||||||| ||||| ||||| || || ||| Sbjct 24987 ACAATGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCC 24928 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 |||| || |||||| |||||| || |||||||| || ||||| || || || || Sbjct 24927 TCCGATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGAC 24868 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACAT-GTCAGATTA 24879 || ||||||||||||||||| || ||||| || || ||| || |||| ||| || || Sbjct 24867 CAGCAACGTTTGATCTTTGCTGGTAAACAACTAGAAGATG-GACGTACATTGTCTGACTA 24809 Query 24880 TAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||||||||||||| ||| | || | ||| | ||| | |||||||| Sbjct 24808 CAACATTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGG 24758 >seq2787 Length=76071 Score = 147 bits (162), Expect = 2e-30 Identities = 165/218 (76%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || |||||||| ||||| | ||||| ||| | || Sbjct 39507 ATGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCC 39566 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| || || |||||||| ||||| || ||||| |||||| Sbjct 39567 GATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAA 39626 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 ||||||||||| || || || || || |||| || || || || | || || ||| Sbjct 39627 CAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGA--CG-GACGCACTCTTTCTGACTAT 39683 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || |||||||| ||||| || || |||||||| ||||| Sbjct 39684 AATATTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 39721 Score = 136 bits (150), Expect = 4e-27 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| ||||||| || || || ||||| ||||| | ||||| ||||| | Sbjct 39963 ATGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCT 40022 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || ||| || ||||||||||||||||| || ||||| |||||| Sbjct 40023 GACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAA 40082 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 |||||| | || ||||| || || || | || ||| ||| | || |||| || || | Sbjct 40083 CAACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCG-TACAC-TGTCTGACTACA 40140 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGT 24912 |||| ||||| ||||| || | ||||| || Sbjct 40141 ACATCCAAAAAGAATCTACTTTGCACTTAGT 40171 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || |||||||| || | ||||| ||| || | Sbjct 41103 ATGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCA 41162 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||||||||||||||| || || || || |||||| Sbjct 41163 GACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 41222 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || || || || |||||||||||| | | | | || || || || Sbjct 41223 CAACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTACAAT 41282 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || || || || | ||||| || || || || || ||||| Sbjct 41283 ATTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGG 41329 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| |||| || || || || ||||| || || | || ||||| | || Sbjct 39735 ATGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCC 39794 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||||||||||||| || || || || |||||| Sbjct 39795 GACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAA 39854 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | | || ||||| || ||||| || || ||| | | | || |||||||| Sbjct 39855 CAGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAAT 39914 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||||||||| || ||||| || || ||||| Sbjct 39915 ATTCAAAAGGAATCTACCCTACATTTAGTATTGCG 39949 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| ||||||| ||||| || || || ||||| || ||||| ||| || | Sbjct 40191 ATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCT 40250 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| |||||| || |||||||||||||| || || || || ||||| Sbjct 40251 GATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAG 40310 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| || || || |||| ||| | | | |||| || || ||| Sbjct 40311 CAGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAAC 40370 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || ||||| || || || || | || |||| |||| || || Sbjct 40371 ATCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGG 40417 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || || || ||||| || || | ||||| || |||| | Sbjct 40875 ATGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGA-GCCATC 40933 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| || ||| ||||| ||||| || |||||||| ||||| ||||| Sbjct 40934 AGACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCA 40993 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | ||||| || || ||||| ||||| ||| | | | |||| || || || Sbjct 40994 ACAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAA 41053 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || || ||||| || |||||||| | || | || ||||| Sbjct 41054 TATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGG 41101 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || ||||| || || ||||| || || || || || |||| | Sbjct 40419 ATGCAAATATTTGTCAAGACACTAACAGGCAAGACTATAACTCTGGAGGTGGA-GCCATC 40477 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | |||| ||||| ||||| ||||| ||||| || || || || ||||| Sbjct 40478 TGACACCATTGAAAATGTAAAGGCTAAGATTCAAGATAAAGAGGGTATTCCCCCAGATCA 40537 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | |||||||| || || ||||| || ||| | | | |||| || || || Sbjct 40538 ACAACGTCTTATCTTTGCTGGCAAGCAGCTAGAAGATGGTCGCACCCTGTCTGACTACAA 40597 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||| || || || || || || || |||| |||| || || Sbjct 40598 CATCCAAAAAGAGTCTACCCTTCATTTAGTACTGCGTCTGCGAGGTGG 40645 Score = 107 bits (118), Expect = 2e-18 Identities = 144/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| |||| || || || || || || || || | || || | ||||| | Sbjct 41331 ATGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGT-GGAGCCATC 41389 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| | |||| || || ||||||||||| || || || || || || || || Sbjct 41390 CGACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCA 41449 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| ||| | |||||||| || |||||| | |||||| | | |||| || ||||| Sbjct 41450 ACAGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAA 41509 Query 24883 CATTCAAAAGGAATCGAC 24900 ||| ||||| ||||| || Sbjct 41510 CATCCAAAAAGAATCTAC 41527 >seq3424 Length=494560 Score = 143 bits (158), Expect = 2e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || |||||||| || | ||||| || || | Sbjct 289067 ATGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTCT 289126 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| || || ||| || |||||||||||||| || ||||| || ||| Sbjct 289127 GATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAA 289186 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 || | | || ||||| || ||||||||||| || | || ||| ||||||||||||| Sbjct 289187 CAGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGA-TGGACGTACACTGTCAGATTATAA 289245 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 |||||||||||||| || | ||||||||| |||| Sbjct 289246 TATTCAAAAGGAATCTACTTTGCACTTGGTGCTGCG 289281 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || ||| | ||||| | || || ||||||||||| | ||||| || || | Sbjct 289978 GATGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACCTTGGAAGTGGAGGCTTC 290037 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 |||||| |||||| || || |||||| |||||||| ||||| || ||||| ||||| Sbjct 290038 TGACACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCA 290097 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATA 24881 |||| | |||| || ||||| || || ||||| || | || ||| |||| || |||| Sbjct 290098 ACAAAGACTGATTTTCGCCGGAAAGCAACTGGAAGA-TGGACGCACATTGTCGGACTATA 290156 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | || || ||||| || || | || || || ||||| Sbjct 290157 ATATCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCG 290193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449873367390520