Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3829 163 4e-34
seq3103 158 2e-32
seq3494 114 2e-19
seq3852 91.5 2e-12
>seq3829
Length=1076
Score = 163 bits (180), Expect = 4e-34
Identities = 183/243 (75%), Gaps = 4/243 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||| ||||| || || |||||||||| |||||| |||||| |||
Sbjct 985 TGTACTTGGTGACGGCTTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 926
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
| || | ||||| |||||| | ||| | || ||||||| | |||||| |||
Sbjct 925 ACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGATCGTGGACCTCTTGTTGTAGT 866
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| ||| | ||||||| | |||| || |||| |||||||| || ||||||||
Sbjct 865 GGGCGAGTCGCGAC--GCCTCGGCGGCGATACGCTCGAAAATGTCGTTCACGAACGAGTT 808
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||||| ||| ||||||| || ||| ||||| || || |||||||| ||
Sbjct 807 CATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGTGGACTTGTTTGAGCACTTT 748
Query 1485708 GTA 1485710
|||
Sbjct 747 GTA 745
>seq3103
Length=1060
Score = 158 bits (174), Expect = 2e-32
Identities = 181/240 (75%), Gaps = 5/240 (2%)
Strand=Plus/Minus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||| ||||| || || |||||||||| |||||| |||||| |||
Sbjct 360 TGTACTTGGTGACGGC-TTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 302
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTT--AGT 1485587
| || | ||||| |||||| | ||| | || ||||||| | |||||| |||
Sbjct 301 ACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGATCGTGGACCTCTTGTTGTAGT 242
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647
| ||| ||| | ||||||| | |||| || |||| |||||||| || ||||||||
Sbjct 241 GGGCGAGTCGCGAC--GCCTCGGCGGCGATACGCTCGAAAATGTCGTTCACGAACGAGTT 184
Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTT 1485707
|||||| ||||||| ||| ||||||| || ||| ||||| || || |||||||||||
Sbjct 183 CATGATGGACATCGCCTTGCTGGAGATTCCGGTGTCCGGGTGGACTTGTTTGAGCACCTT 124
>seq3494
Length=1266558
Score = 114 bits (126), Expect = 2e-19
Identities = 170/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531
|| || ||||||||||| || ||||| ||| ||||| | || || |||||| | | |
Sbjct 401875 TATTTAGTGACGGCCTTCGTTCCCTCGCTGACAGCGTGTTTCGCGAGCTCGCCGGGAAGG 401934
Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591
| || || |||| |||||| | || | | |||||| | |||||| | ||
Sbjct 401935 AGGAGACGGACGGAGGTCTGCACTTCCCTCGACGTGATCGTTGACCTCTTGTTGTAGTGC 401994
Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651
||||||||| ||||||| |||| || || | || ||||||||||| || |||||
Sbjct 401995 GCCAGGCGGGACGCCTCGGCCGCGATACGTTCAAAAATATCGTTGACAAAGGAATTCATT 402054
Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAA 1485711
|| ||||| | || | ||||| || ||| ||||| |||||||| | ||| ||||||
Sbjct 402055 ATAGACATAGCCTTACTCGAGATCCCAGTGTCCGGGTGAACCTGCTTCAACACTTTGTAA 402114
Query 1485712 A 1485712
|
Sbjct 402115 A 402115
>seq3852
Length=1179
Score = 91.5 bits (100), Expect = 2e-12
Identities = 121/166 (73%), Gaps = 4/166 (2%)
Strand=Plus/Plus
Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529
|||||||||||||||| ||||| || || |||||||||| |||||| |||||| |||
Sbjct 1016 TGTACTTGGTGACGGCTTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAACTCGCCGGGCA 1075
Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGT--TAGT 1485587
| || | ||||| |||||| | ||| | || ||||||| | ||||| ||||
Sbjct 1076 ACAGGAGCCTCACGGAGGTCTGCACCTCCCTGGACGTGATCGTGGACCTCTTGTTGTAGT 1135
Query 1485588 GCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1485633
| ||| || || ||||||| | |||| || |||| ||||||
Sbjct 1136 GGGCG--AGTCGCGACGCCTCGGCGGCGATACGCTCGAAAATGTCG 1179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915788032016651
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