Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_022266.1
Length=31967
Score E
Sequences producing significant alignments: (Bits) Value
seq3063 444 1e-120
>seq3063
Length=7092
Score = 444 bits (492), Expect = 1e-120
Identities = 351/421 (83%), Gaps = 0/421 (0%)
Strand=Plus/Plus
Query 11204 GGTGACCGCGTACGAGCAGACGGTGAACGAGGAGCGGAGCTTTCAGAAAAGCTTCAACAA 11263
||| |||||||||||||||||||||||| ||||| | |||||| |||||||| |||||
Sbjct 6672 GGTTACCGCGTACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 6731
Query 11264 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCATCGGCCTGATGCATCTGTGGGA 11323
|||||||||||| || | ||||||||||||||||| || || |||||||||||||||||
Sbjct 6732 CCACGTGCGCACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 6791
Query 11324 CTTTGTGGAGGCGTACGTGCAGAACCCGTCGAGCAAGCCGCTGACGGCGCAGTTGTTCCT 11383
|||||| ||| | ||| ||||| ||||||||||| | ||||||| |||||||
Sbjct 6792 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 6851
Query 11384 GATCGTGCAGCACAGTCGGGACAACGAGACGTTCCGCGAGGCGATGCTGAACATCGCGGA 11443
|| ||||||||||| ||||||||||| | ||| | || ||| |||| ||||| | ||
Sbjct 6852 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 6911
Query 11444 GCCCGAGGGCCGCTGGCTCTTGGACCTGATTAACATCCTGCAGAGCATCGTGGTGCAGGA 11503
|||||||||||||||||| | || |||| ||||| ||||||||||| |||||||||||
Sbjct 6912 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 6971
Query 11504 GCGCAGCCTGAGCCTGGCCGACAAGGTGGCGGCCATCAACTACAGCATGTTGAGCCTGGG 11563
||||||| |||||||||| ||||||||||| ||||| ||||| |||| | || |||||
Sbjct 6972 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 7031
Query 11564 CAAGTTTTACGCCCGCAAGATCTACAAGAGCCCCTACGTGCCCATAGACAAGGAGGTGAA 11623
||||||||||||||||||||| ||| | | ||| ||||| ||||||||||||||||| ||
Sbjct 7032 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 7091
Query 11624 G 11624
|
Sbjct 7092 G 7092
Score = 120 bits (132), Expect = 6e-23
Identities = 108/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 15385 ATGTACGGCGGCGCCAAGCGGCGCTCCAGCGAGCACCCCGTCCGCGTCCGCGGCCACTAC 15444
|||| ||||| || ||| ||||||| | | ||||| || ||||| ||||| ||||||
Sbjct 12 ATGTTTGGCGGGGCAAAGAAGCGCTCCGACCAACACCCAGTGCGCGTGCGCGGGCACTAC 71
Query 15445 CGGGCCCCCTGGGGCGCCCACAAGCGCGGCGTCTCCACGCGCACCACCGTCGACGACGCC 15504
|| || ||||||||||| ||||| |||||| | | ||||||||||||||| ||||||
Sbjct 72 CGCGCGCCCTGGGGCGCGCACAAACGCGGCCGCACTGGGCGCACCACCGTCGATGACGCC 131
Query 15505 ATCGACGCCGTCGTGG 15520
|| ||||| || ||||
Sbjct 132 ATTGACGCGGTGGTGG 147
Score = 114 bits (126), Expect = 3e-21
Identities = 356/554 (64%), Gaps = 65/554 (12%)
Strand=Plus/Plus
Query 15796 CGCCGGGGAAACGTGTACTGGGTGCGAGACGCG---TCGGGCGTGCGCGTGCCGGTGCGC 15852
||| |||| ||||||||||||||||| ||| || | ||| |||||||||| ||||||
Sbjct 468 CGCAGGGGCAACGTGTACTGGGTGCGCGACTCGGAATTCGGCCTGCGCGTGCCCGTGCGC 527
Query 15853 ACCCGCCCCCCTCGGAGTTAGA-----AGACAAAAAGACG--GACGAAGACTGA-----G 15900
||||||||||| || | |||| ||| |||| || ||| |||| |
Sbjct 528 ACCCGCCCCCCGCGCAACTAGATTGCAAGAAAAAACTACTTAGACTCGTACTGTTGTATG 587
Query 15901 TTTCCCT----GTCGTTGCC------AGC-ATGAGCAAGCGCAAGTTCAAAGAAGAGCTG 15949
| ||| | || || ||| ||| ||||||||| ||||||||||| ||
Sbjct 588 TATCCAGCGGCGGCGGCGCGCAACGAAGCTATGTCCAAGCGCAAAATCAAAGAAGAGATG 647
Query 15950 CTGGAGGCCCTCGTGCCCGAGATCTACGGCCCGGCCNNNNNNNNNNNNNNNNNNNNNGAC 16009
|| ||| | ||| ||| |||||||| ||||| || ||
Sbjct 648 CTCCAGGTCATCGCGCCGGAGATCTATGGCCC--CCCGAAGAAG-------------GAA 692
Query 16010 GTCAAGCCCGAAGTTAAGCCCCGCGCGCTGAAGCGGGTTAAAAAGCGGGAAAAGAAAGAG 16069
| ||| || |||||||| ||| |||||||| |||||| ||||||||||
Sbjct 693 G---AGCAGGATTACAAGCCCCGAAAGCTAAAGCGGGTCAAAAAGA---AAAAGAAAGAT 746
Query 16070 GAGAAGCAGGAAGCAGGGTTGCTAGACGTCGACGACGGCGTGGAGTTCGTGCGGTCCTTC 16129
|| | | ||| | ||||||| ||||| | ||| | |
Sbjct 747 GATGATGATGAAC---------------TTGACGACGAGGTGGAACTGCTGCACGCAACC 791
Query 16130 GCGCCCCGTCGCCGGGTGCAGTGGCGGGGTCGCCGCGTCAAGCTCGTCCCGCGGCCGGGC 16189
|||||| | || ||||| |||||| ||||| ||||| | | || ||| || |||
Sbjct 792 GCGCCCAGGCGGCGGGTACAGTGGAAAGGTCGACGCGTAAGACGTGTTTTGCGACCCGGC 851
Query 16190 ACCGTGGTGTCTTTCACCCCCGGCCTGCGTTCGGCCACGCGCGGCCTGAAGCGCGAGTAC 16249
||| || ||| || ||||| ||| || ||| ||| | ||||||| |||
Sbjct 852 ACCACCGTAGTTTTTACGCCCGGTGAGCGCTC---CACCCGCACCTACAAGCGCGTGTAT 908
Query 16250 GACGAGGTCTATGGCGACGAAGACATCCTGGAGCAGGCCGCCCAGCAGCTCGGGGAGTTT 16309
|| ||||| || |||||||| ||| | || ||||||||| | ||| ||||||||||||
Sbjct 909 GATGAGGTGTACGGCGACGAGGACCTGCTTGAGCAGGCCAACGAGCGCCTCGGGGAGTTT 968
Query 16310 GCTTACGGCAAGCG 16323
|| ||||| |||||
Sbjct 969 GCCTACGGAAAGCG 982
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 102167571881682
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