Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 118 7e-22
seq3424 114 8e-21
seq1305 102 5e-17
>seq2787
Length=76071
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| || || |||| ||| ||||||||| ||||| ||||| || ||| |||| ||||
Sbjct 40403 CAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCATC 40344
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|||| |||||| || || ||||| || || ||||| || | || | ||||| |||||
Sbjct 40343 TTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTC 40284
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| ||||| ||| || | | || | ||| || || || || | ||| |||||
Sbjct 40283 TTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGT 40224
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || ||||| || ||||| ||||||||
Sbjct 40223 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191
Score = 93.3 bits (102), Expect = 3e-14
Identities = 138/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| |||||||| || || || || | |||| |||| |||| ||||||||| || ||
Sbjct 40838 CTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCATCTTCCAATTGCTTTCCAGCAAA 40779
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || ||||| |||||| | || | |||||||| || | |||||| |||||| |
Sbjct 40778 AATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGTATTTTAGCTTTGAC--A 40721
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | ||| | || || || | ||| ||||||||||| || | || ||
Sbjct 40720 TTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCAGTCAATGTTTTG 40661
Query 34964 ACAAAGATCTGCAT 34977
||||| || |||||
Sbjct 40660 ACAAATATTTGCAT 40647
Score = 89.7 bits (98), Expect = 3e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| || || || ||||| |||||||| || || |||| | || |||
Sbjct 39715 ACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCCGTCTTCC 39656
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
| ||||||||| ||||| |||| ||||| || ||| | || | || |||||||| |
Sbjct 39655 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 39596
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
||||| ||| || | | || | || | || || || | || ||||| ||
Sbjct 39595 ATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 39536
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||||| || || || ||||||||||||||
Sbjct 39535 CCCGTAAGTGTTTTCACAAAGATCTGCAT 39507
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| |||||||| || ||||| || || | ||| |||| ||||| ||||| || |||||
Sbjct 41294 CTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAA 41235
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
|| || ||||| || ||| | || | ||||| ||||| | || || ||| ||
Sbjct 41234 AATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATT 41175
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | || | || || || || || | || || || || || || || ||||||||
Sbjct 41174 TTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTAC 41115
Query 34966 AAAGATCTGCAT 34977
||||||||||||
Sbjct 41114 AAAGATCTGCAT 41103
>seq3424
Length=494560
Score = 114 bits (126), Expect = 8e-21
Identities = 155/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| || || ||||||| ||| || ||||| || |||||||| |||| ||||| ||
Sbjct 290649 CTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGATAATGTGCGCCCA 290590
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||||||||| ||||||| ||| || ||| | || | || |||||
Sbjct 290589 TCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTA 290530
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || ||| || || | |||| | ||| || || || || | || ||
Sbjct 290529 TCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACTTCCAAAGTGATA 290470
Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || || || || ||||||||||| || ||||||
Sbjct 290469 GTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATG 290434
Score = 111 bits (122), Expect = 1e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTG-AATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807
|||| || |||| || ||| |||||||| || | || | ||||||||||| || |||||
Sbjct 289523 TTCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGAT-TCCTTCTGAATATTGTAGTCA 289465
Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867
||||| |||| |||| || || |||||||| || || || |||| |||||| ||| |
Sbjct 289464 GATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGG 289405
Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927
|| | ||||| || || | ||||| || || | | || | ||| || ||
Sbjct 289404 GGAATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCC 289345
Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || || ||||| || || || ||||||||||| || |||||
Sbjct 289344 ACTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCAT 289295
Score = 107 bits (118), Expect = 1e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|||||||| || |||||||| || || ||||| |||| |||| |||||||||||||||
Sbjct 288801 TCCTTCTGGATATTATAGTCTGAGAGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAA 288742
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| |||| ||| || ||| | || | || |||||||| | || ||| || ||| |
Sbjct 288741 ATTAGTCTTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTT 288682
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| || || || || | || ||||| || || || | || |||||
Sbjct 288681 TCGATTGTATCAGAAGCTTCCACTTCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACG 288622
Query 34967 AAGATCTGCATGAT 34980
||||| ||||||||
Sbjct 288621 AAGATTTGCATGAT 288608
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || ||||||||||| | |||| |||| ||||||||||||||||||||
Sbjct 290170 CTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAA 290111
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||||| ||| || ||| | || | || |||||||| | || ||| || ||
Sbjct 290110 AATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATT 290051
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| | ||| ||||| || || | ||| || || || || || | || || ||
Sbjct 290050 TTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCAC 289991
Query 34966 AAAGATCTGCAT 34977
||| || |||||
Sbjct 289990 AAAAATTTGCAT 289979
Score = 107 bits (118), Expect = 1e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || ||||||||||| | |||| |||| ||||||||||||||||||||
Sbjct 290398 CTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAA 290339
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||||| ||| || ||| | || | || ||||| || | || ||| || ||
Sbjct 290338 AATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTATCTTGAATCTTTGCCTTAACATT 290279
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| |||| | ||| || || || || | || || || || || || || ||||||||
Sbjct 290278 TTCTATTGTATCAGAAGCTTCCACCTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTAC 290219
Query 34966 AAAGATCTGCAT 34977
||| || |||||
Sbjct 290218 AAAAATTTGCAT 290207
Score = 102 bits (112), Expect = 5e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || |||| || ||| ||||| || | || ||||||||||| || ||||| |
Sbjct 289751 TTCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAG 289692
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
|||| |||| |||| || || |||||||| || || || |||| |||||| ||| | |
Sbjct 289691 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 289632
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||| || || | ||||| || || | | || | ||| || || |
Sbjct 289631 GAATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 289572
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || ||||| || || || ||||||||||| || |||||
Sbjct 289571 CTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCAT 289523
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
|||| || |||| || || || ||||| | || || ||||||||||| || || |
Sbjct 289067 TTCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAG 289008
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
|||| |||| |||| || || |||||||| || || || |||| |||||| ||| | |
Sbjct 289007 ATAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGG 288948
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGA 34928
| | ||||| || || | ||||| ||| || | | || | ||| | ||| |
Sbjct 288947 GAATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 288888
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
| || | || || ||||| || || || |||||||| || || |||||
Sbjct 288887 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCAT 288839
Score = 84.2 bits (92), Expect = 1e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| |||||||| || ||||| ||||| | || |||| || ||||||||||| || ||
Sbjct 289941 TCTTTCTGAATATTGTAGTCTGATAGTGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAA 289882
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || | ||| |||||| | || | || ||||| || | ||||| || || |
Sbjct 289881 ATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATCTTGAATTTTGGCCTTAACATTT 289822
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| || ||| || || | || || ||||| || || || ||||| |||
Sbjct 289821 TCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCACA 289762
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 289761 AATATTTGCAT 289751
>seq1305
Length=286731
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| |||||||| ||||| || | | || |||| || ||||| || || || |||
Sbjct 24794 TCCTTTTGAATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAG 24853
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| |||||||||||| | || | || ||||| || | ||||| ||| || |
Sbjct 24854 ATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTT 24913
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
|||| | || |||||| || || | ||| ||||| || ||||| |||||||| ||
Sbjct 24914 TCTATAGTATCGGAGGCCTCCACCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACG 24973
Query 34967 AAGATCTGCAT 34977
|| || |||||
Sbjct 24974 AAAATTTGCAT 24984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325675695937271
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |