Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq2787 159 5e-34
seq3424 123 4e-23
seq1305 107 3e-18
>seq2787
Length=76071
Score = 159 bits (176), Expect = 5e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | |||||| | || ||||||||||||||| | || || ||| | |
Sbjct 39964 TGCAAATCTTTGTTAAAACACTCACTGGAAAAACAATTACTTTAGAAGTTGAAGCTTCTG 40023
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| ||||||| ||| |||||| ||| |||||||||||||| || |||||||
Sbjct 40024 ACACAATTGAAAATGTGAAAGCTAAAATCCAAGACAAAGAAGGCATTCCTCCGGATCAAC 40083
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || |||||||| || || |||||||| ||| | | || | | || || || |
Sbjct 40084 AACGTCTTATTTTTGCGGGCAAGCAATTAGAAGATGGTCGTACACTGTCTGACTACAACA 40143
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||||||||| ||| | || |||||| | || |||||||| ||||
Sbjct 40144 TCCAAAAAGAATCTACTTTGCACTTAGTACTTCGTTTAAGAGGTGGTA 40191
Score = 129 bits (142), Expect = 9e-25
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | |||||| | || || ||||| |||||| | || || |||| | ||
Sbjct 39508 TGCAGATCTTTGTGAAAACACTTACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 39567
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||||||| ||||| ||| || ||||||||||| || |||||||
Sbjct 39568 ATACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 39627
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | ||||| || || || ||||| || || | || | | || |||||||
Sbjct 39628 AACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGACGCACTCTTTCTGACTATAATA 39687
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||||||||| ||| | || || ||||| ||
Sbjct 39688 TTCAAAAAGAATCTACTCTTCACTTGGTATTGCG 39721
Score = 125 bits (138), Expect = 1e-23
Identities = 156/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || | ||||||||||| || ||| | || ||||| | ||
Sbjct 39736 TGCAGATCTTTGTTAAGACTCTTACAGGAAAAACCATCACTTTAGAGGTAGAGCCGTCCG 39795
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| ||||| ||||||| || || || ||| ||||| || ||||| || |||||||
Sbjct 39796 ACACTATCGAAAATGTGAAGGCAAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAAC 39855
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || |||||||| || |||||| |||| ||| | || ||| | ||||||||||
Sbjct 39856 AGAGGCTTATTTTTGCTGGAAAACAACTAGAAGATGGCCGTACATTATCTGATTATAATA 39915
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||| ||||| || | ||||||||||| ||
Sbjct 39916 TTCAAAAGGAATCTACCCTACATTTAGTATTGCG 39949
Score = 118 bits (130), Expect = 2e-21
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||||||||| | |||||||| || ||||| || ||||| | || ||||||| |
Sbjct 40648 TGCAAATATTTGTCAAAACATTGACTGGAAAGACCATTACCCTGGAAGTAGAACCATCTG 40707
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || | ||||| ||| ||||||||| ||| || ||||| || || || ||||
Sbjct 40708 ACACAATCGAGAATGTCAAAGCTAAAATACAGGATAAGGAGGGCATCCCCCCAGACCAAC 40767
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | ||||||||||| || || ||||| || ||| | | || || | ||||| ||||
Sbjct 40768 AACGTCTCATTTTTGCTGGAAAGCAATTGGAAGATGGTCGCACTTTGTCTGATTACAATA 40827
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| || ||||| || || | || |||||
Sbjct 40828 TTCAGAAAGAGTCAACCCTGCACTTAGT 40855
Score = 118 bits (130), Expect = 2e-21
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGA-ACATAAC 146090
|||||||||| | |||||| | || ||||||||||| ||| | || || || ||| |
Sbjct 40876 TGCAAATATTTGTCAAAACACTTACTGGAAAAACAATAACTTTGGAAGTTGAGCCATCA- 40934
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| || ||| ||||||| ||| ||| || ||| ||| ||||| ||||| || ||||||
Sbjct 40935 GACACCATTGAAAATGTTAAAGCTAAGATTCAAGATAAGGAAGGAATTCCTCCAGATCAA 40994
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
||| | || || || || ||||||||| | || ||| | || | | || || |||
Sbjct 40995 CAACGTCTTATCTTCGCTGGTAAACAACTGGAAGATGGCCGCACCCTGTCTGACTACAAT 41054
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
|| || ||||| ||||| | || || ||| | || | |||||||||
Sbjct 41055 ATCCAGAAAGAGTCGACCCTTCACTTGGTACTCCGTCTCCGAGGAGGTA 41103
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || |||| ||| | ||||| ||||| || || | || || |||| |
Sbjct 41104 TGCAGATCTTTGTAAAGACACTGACAGGGAAAACTATCACATTAGAAGTTGAACCCTCAG 41163
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| ||||||| ||| || || ||| ||||| || ||||| || |||||||
Sbjct 41164 ACACTATTGAAAATGTTAAAGCCAAGATCCAAGACAAAGAGGGTATTCCCCCAGATCAAC 41223
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | |||||||| || || || || | || ||| | || | | || || ||||
Sbjct 41224 AACGTCTCATTTTCGCTGGCAAGCAGCTGGAGGATGGGCGTACTCTTTCTGACTACAATA 41283
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || ||||| || ||| | || ||||||||||| ||| |||||||||
Sbjct 41284 TTCAGAAAGAGTCCACTTTGCACTTAGTATTACGTTTACGAGGAGGTA 41331
Score = 109 bits (120), Expect = 9e-19
Identities = 167/238 (70%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| |||| ||||| || ||||| | || || |||| |
Sbjct 40192 TGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACCCTGGAAGTGGAACCCTCTG 40251
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||||||| |||||| ||| ||||| ||||| ||||| ||||| |
Sbjct 40252 ATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGC 40311
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || || ||||| ||||| ||||| || ||| | | || | | || || || |
Sbjct 40312 AGCGTCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACCCTGTCTGACTACAACA 40371
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATT 146269
| || || || || || | ||| ||||| | || | |||| |||| |||||||
Sbjct 40372 TCCAGAAGGAGTCTACCCTTCATCTAGTACTGCGTCTGCGAGGTGGTATGCAAATATT 40429
Score = 98.7 bits (108), Expect = 2e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | || || | || || || || || ||| | || || || | ||
Sbjct 41332 TGCAGATCTTTGTTAAGACTCTTACTGGGAAGACCATCACTTTGGAGGTGGAGCCATCCG 41391
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| ||||| ||||||| || ||| || ||| ||| || |||||||| || || ||||
Sbjct 41392 ACACTATCGAAAATGTTAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCAAC 41451
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | ||||| ||||| |||||||| ||||| ||| | || | | || ||||| |
Sbjct 41452 AGCGTCTCATCTTTGCTGGTAAACAGTTAGAGGATGGCCGCACTCTGTCGGACTATAACA 41511
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTA 146240
| ||||||||||| ||| | |||||||||
Sbjct 41512 TCCAAAAAGAATCTACTTTGCATTTAGTA 41540
>seq3424
Length=494560
Score = 123 bits (136), Expect = 4e-23
Identities = 163/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| ||||||| ||||| || ||||| || || | || || ||| | |
Sbjct 288612 TGCAAATCTTCGTAAAAACTTTAACTGGGAAAACCATCACATTGGAAGTGGAAGCTTCTG 288671
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || |||| ||||| || || ||| || |||||||| || || |||||||
Sbjct 288672 ATACAATCGAAAACGTAAAGGCAAAGATTCAAGACAAGGAAGGCATCCCTCCAGATCAAC 288731
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| ||||| || || || ||||| || ||| | || | |||| |||||||
Sbjct 288732 AAAGACTAATTTTCGCCGGAAAGCAATTGGAAGATGGGCGCACACTCTCAGACTATAATA 288791
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || ||||| ||| | || ||||| ||||| |||| || ||
Sbjct 288792 TCCAGAAGGAATCTACTTTGCACTTAGTTTTACGTCTAAGGGGTGG 288837
Score = 120 bits (132), Expect = 5e-22
Identities = 162/226 (72%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || |||| ||| | || || ||||| || ||| | || || ||| | |
Sbjct 290208 TGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAGGTGGAAGCTTCTG 290267
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| || || || ||| ||| ||||||||||| || |||||||
Sbjct 290268 ATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAAC 290327
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| ||||| || || || ||| | || ||| | || || | || |||||||
Sbjct 290328 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAATA 290387
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || || || ||| | |||||||| || || ||||||| ||
Sbjct 290388 TCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 290433
Score = 114 bits (126), Expect = 2e-20
Identities = 143/196 (73%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || |||| ||| | || || ||||| || ||| | || || ||| | |
Sbjct 290436 TGCAAATTTTTGTAAAGACACTGACTGGGAAAACTATCACTTTGGAAGTGGAAGCTTCTG 290495
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| || || || ||| ||| ||||||||||| || |||||||
Sbjct 290496 ATACAATAGAAAATGTTAAGGCAAAGATTCAAGATAAGGAAGGCATTCCTCCAGATCAAC 290555
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| ||||| || || || ||| | || ||| | || ||| |||| |||||||
Sbjct 290556 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACATTATCAGACTATAATA 290615
Query 146212 TACAAAAAGAATCGAC 146227
| || |||||||| ||
Sbjct 290616 TCCAGAAAGAATCTAC 290631
Score = 111 bits (122), Expect = 2e-19
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | |||||||| || || ||||| ||||| | || || || | |
Sbjct 289980 TGCAAATTTTTGTGAAAACATTGACTGGCAAAACTATTACCTTGGAAGTGGAGGCTTCTG 290039
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| || || || ||| || ||||||||||| || |||||||
Sbjct 290040 ACACAATAGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 290099
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| ||||| || || || ||| | || ||| | || || | || |||||||
Sbjct 290100 AAAGACTGATTTTCGCCGGAAAGCAACTGGAAGATGGACGCACATTGTCGGACTATAATA 290159
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || || || ||| | |||||||| || || ||||||| ||
Sbjct 290160 TCCAGAAGGAGTCTACTTTGCATTTAGTTTTGCGTCTAAGAGGTGG 290205
Score = 109 bits (120), Expect = 9e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||||||||| |||| ||| | || || ||||| || || | || || || | |
Sbjct 289068 TGCAAATATTTGTAAAGACACTGACTGGCAAAACTATCACATTGGAAGTGGAGGCTTCTG 289127
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| || ||||| ||| |||||||||||||| || || ||||
Sbjct 289128 ATACAATAGAAAATGTTAAGGCAAAAATTCAAGACAAAGAAGGCATTCCTCCTGACCAAC 289187
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || ||||||||||| ||||| | || ||| | || | ||||||||||||
Sbjct 289188 AGAGGCTTATTTTTGCAGGAAAACAGCTGGAAGATGGACGTACACTGTCAGATTATAATA 289247
Query 146212 TACAAAAAGAATCGACTATCCATTTAGT 146239
| ||||| ||||| ||| | || || ||
Sbjct 289248 TTCAAAAGGAATCTACTTTGCACTTGGT 289275
Score = 105 bits (116), Expect = 1e-17
Identities = 159/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||||||||| | || ||| | || || || || || || | || || || | |
Sbjct 289752 TGCAAATATTTGTGAAGACACTGACTGGCAAGACTATCACACTGGAAGTTGAGCCCTCTG 289811
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || || ||||||| || ||||| ||| ||| ||||||||||| || || ||||
Sbjct 289812 ACACAATCGAAAATGTTAAGGCCAAAATTCAAGATAAGGAAGGCATTCCTCCAGACCAAC 289871
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|||| || |||||||| || || ||| | || ||| | || || |||| || ||||
Sbjct 289872 AAAGGCTTATTTTTGCTGGAAAGCAACTTGAGGATGGACGTACACTATCAGACTACAATA 289931
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || |||||||| ||| | ||||||||| | || | ||||| ||
Sbjct 289932 TTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTGAGAGGTGG 289977
>seq1305
Length=286731
Score = 107 bits (118), Expect = 3e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || | || || ||||| ||||| | || || || ||
Sbjct 24983 TGCAAATTTTCGTCAAGACCCTTACGGGTAAAACCATTACCCTCGAGGTGGAGGCCTCCG 24924
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
||||||| ||||||||||| |||||| ||| ||| ||||| |||||||| || || |
Sbjct 24923 ATACTATAGAAAATGTAAAAGCTAAAATCCAAGATAAGGAAGGTATTCCACCAGACCAGC 24864
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | || ||||| ||||||||| |||| ||| | || || | || || || |
Sbjct 24863 AACGTTTGATCTTTGCTGGTAAACAACTAGAAGATGGACGTACATTGTCTGACTACAACA 24804
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATA 146263
| ||||| ||||| || | ||| | || | ||| | | |||||||| ||
Sbjct 24803 TTCAAAAGGAATCCACATTGCATCTTGTGCTTCGACTTCGCGGAGGTAACTA 24752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786124055112280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |