Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq3463 248 7e-61 seq2787 156 3e-33 seq3424 141 7e-29 seq1305 123 2e-23 seq2396 111 1e-19 >seq3463 Length=282612 Score = 248 bits (274), Expect = 7e-61 Identities = 642/969 (66%), Gaps = 27/969 (3%) Strand=Plus/Minus Query 45112 GCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGTGCCAGTG 45171 || || ||||| |||||||| || ||| | || || || || | || | || | Sbjct 183009 GCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATACCTATA 182950 Query 45172 CCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGGCATTAAT 45231 || || ||||| |||||| | ||||| ||||| || || ||||| || || ||||| ||| Sbjct 182949 CCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGTGACGGCATCAAT 182890 Query 45232 GACAGTCTTAAAACGATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCGCCGGCCGC 45291 || ||| | ||| ||| ||||||||| |||| | || || || |||||| Sbjct 182889 GATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGCGGCCGT 182830 Query 45292 TCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCACAAAAAGGC 45351 || |||||||| || ||||| |||||||| || | ||||||||||||||||| Sbjct 182829 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 182770 Query 45352 GTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTGTAAAACGG 45411 | ||| | |||||||| || || |||||||| ||||| ||| | ||| | |||||| Sbjct 182769 TTGTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 182710 Query 45412 GCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCGATCCGTTT 45471 || ||| | || || | | || || ||||| || |||||||| ||||||| || Sbjct 182709 GCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGATCCTTTC 182650 Query 45472 TACCATT---TGCACGATGCGGAGA-AACGCGCTTTGTTTGTGGAATCCGTGCGCGAATT 45527 | | || | || | | ||| ||| || |||||| | || || || || Sbjct 182649 TTCTTTTTAGTTGACAAATCTAAGAGAACACG----ATTTGTGCAGTCAGTAAAGGAGTT 182594 Query 45528 TTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCCGGCGGCAA 45587 | | || |||||||| || || || || ||||| ||||||||||| || || ||||| Sbjct 182593 TCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGGCAA 182534 Query 45588 TGGCGCCAATC----CATCGGTGGGCGATCCAGAACGCGACGGTCTCACTTATGTAGCAC 45643 || || || | | ||||| | |||||| || ||| ||||||| Sbjct 182533 AGGTGCTAACCCTGACCTCGGTAG----CCCAGAA---GATGGTGATTGTTATGTAAGTT 182481 Query 45644 TGCTGCGCGATTTGCGCGACATGCTCGATCAATTGGCGCA-CGAA-ACCGGTCGGCGCTA 45701 || || || || || || |||||||| | | | || | || | ||| | || Sbjct 182480 TGATGAAAGAATTACGTGAGATGCTCGACGAGCT--CTCAGCTAAGAATGGTAAGAAATA 182423 Query 45702 CGAACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCGCTTTGGTAGATTAT--CAA 45759 |||| | ||| | ||||| ||||| || || |||||| | ||||| ||| ||| Sbjct 182422 CGAATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTAGACTATGGCAA 182363 Query 45760 GACGCGCAAACTTATCTCGATCGAATCTTTTTAATGACGTATGATTTTAAAGGCGCTTGG 45819 | || |||| |||| | |||| || || || |||| || || || || || || ||| Sbjct 182362 G--GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGG 182305 Query 45820 TCGAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCCAGAATGGAATCGCGACGAG 45879 || || | | || ||||||||| | |||||||||||| ||||||| | | || Sbjct 182304 TCAAATGACACTCTTGGACATCAAACGCCATTGTACGCGCCAGCGTGGAATCCCAAGGAA 182245 Query 45880 CGTTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAAACGGGTAAAGCCTCAAAAA 45939 ||||||| |||| || || | ||||| | | | || || ||| | || Sbjct 182244 ACTTACACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAGAAG 182185 Query 45940 ATCGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGGAGTAATTAACTATCAAGAC 45999 || || | || || || ||||| ||||| || ||||| || || | | || ||||| Sbjct 182184 ATTGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGAC 182125 Query 46000 GACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGGCACTTGGGAAGACGGTGTG 46059 ||| || || || |||| ||| || || || || || |||||| ||||||| ||| Sbjct 182124 AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGTG 182065 Query 46060 ATCGATTAT 46068 | || ||| Sbjct 182064 GTTGACTAT 182056 >seq2787 Length=76071 Score = 156 bits (172), Expect = 3e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || |||||||| || || |||||||| ||||| || || | Sbjct 40645 CCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAGAC 40586 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || || || ||||||||| | || | | ||| ||||| || ||| Sbjct 40585 AGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGGGA 40526 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||||||||||| ||||| ||| || | || ||| |||| | |||||||| | || || Sbjct 40525 ATACCCTCTTTATCTTG-AATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCAC 40467 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||||||||| ||||| |||| || || |||||||| ||||| Sbjct 40466 CTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419 Score = 150 bits (166), Expect = 1e-31 Identities = 167/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||| ||||| || |||||||||||||| ||||| || | || ||||| Sbjct 39722 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCC 39663 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| || ||||| | ||||| | ||| ||||| || ||||| || || || Sbjct 39662 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 39603 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||| ||| |||| | ||| || ||| |||| ||||| | ||| | Sbjct 39602 GTCTTG-AATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAA 39544 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | ||||| || || | ||||| ||||| ||||||||||| Sbjct 39543 TGGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTT 39504 Score = 149 bits (164), Expect = 5e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || | || |||||| || | |||||| || || || || || ||||| || || | Sbjct 40417 CCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 40358 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||||| ||| || | ||| || |||||| | || | | |||||||| || || Sbjct 40357 AGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGG 40298 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||||||||||||| | ||| ||| ||| |||| | ||| ||||| |||| ||| Sbjct 40297 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 40238 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || || ||||||| |||||||||||| |||||||| Sbjct 40237 TCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 |||| || ||||| || || ||||| |||||||| |||||||| | | || || | Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || |||||||| |||||| | || | || || ||||| || ||||||||||||||| Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 ||||| | ||| || ||| |||| | |||||| || | ||||| || | ||| || Sbjct 39829 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 39770 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || | || |||||||| ||||||||| Sbjct 39769 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || ||||| || || || || | || ||||||||||| ||||| || || | Sbjct 40189 CCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAC 40130 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || ||| ||| || | ||| ||||| ||| | || | | ||| |||||||| ||| Sbjct 40129 AGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAGGA 40070 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || || ||||||||||| | ||| ||| ||| |||| | ||||||||| ||| ||| Sbjct 40069 ATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAACT 40010 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | ||| || ||||| ||||| | ||||||||||| || ||||| Sbjct 40009 TCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||| | ||||| | || || || | ||||| ||||| ||||| || || || | | Sbjct 41329 CCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAA 41270 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || || || |||||||| | || | | ||| ||||| || ||| Sbjct 41269 AGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGGGA 41210 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||||||||||||||| | || ||| ||| |||| | |||||| || |||| ||| Sbjct 41209 ATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAACT 41150 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || |||||||| || || | || || ||||| |||||||| Sbjct 41149 TCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103 Score = 105 bits (116), Expect = 5e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || ||||| | || ||||||||||| |||||||| |||| | ||||| Sbjct 41546 ACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCC 41487 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||||| |||||| | || | | || || || || ||||| ||||| || Sbjct 41486 ATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTT 41427 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || || ||| |||| | |||||| || | || || || | ||| || Sbjct 41426 ATCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGAT 41367 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| | || |||||||| |||||||| Sbjct 41366 GGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 41331 >seq3424 Length=494560 Score = 141 bits (156), Expect = 7e-29 Identities = 171/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | ||||||||||| || | || ||||| |||||||| |||||||| | Sbjct 289294 TCCACCCCTAAGGCGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGA 289235 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || || ||| || || ||||| || ||| | || | || || || || || || Sbjct 289234 CAGTGTACGTCCATCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGG 289175 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || ||||||||||| |||||||| || ||| |||||| || |||||| || | Sbjct 289174 AATGCCTTCTTTGTCTTG-AATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCA 289116 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | || |||||||||||||| | || || |||||||| |||||| Sbjct 289115 CTTCCAATGTGATAGTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289066 Score = 140 bits (154), Expect = 2e-28 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG- 29617 ||| || || | ||||| || ||||| | || || || || || || ||||| |||| Sbjct 290206 TCCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGA 290147 Query 29618 CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCG 29677 ||||| |||| ||| || ||||| || || || | |||| |||||| ||||| || | Sbjct 290146 CAATG-TGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAG 290088 Query 29678 GAATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 |||| || || |||||||| ||| |||| || ||| |||||| ||||||||| || Sbjct 290087 GAATGCCTTCCTTGTCTTG-AATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCC 290029 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| | || |||||||||||||| || ||||| ||||| || ||||| Sbjct 290028 ACTTCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| || || || | || | || |||||||| |||||||| ||||| | Sbjct 289066 TCCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGA 289007 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || |||||| | || | |||||||||||| || || Sbjct 289006 TAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 288947 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||| || || |||||| | ||| ||| |||| | || |||||| | || | Sbjct 288946 AATTCCCTCTTTATCCTG-AATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAA 288888 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | ||| ||||| |||||||| | || || || || || |||||| Sbjct 288887 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 288838 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| ||||| |||| || | || ||||| || ||||| || || || | Sbjct 289522 TCCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGA 289463 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || |||||| | || | |||||||||||| || || Sbjct 289462 TAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 289403 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 |||||||||||| || || |||||| | || ||| |||| | || |||||| ||| | Sbjct 289402 AATACCCTCTTTATCCTG-AATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 289344 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | ||| ||||| |||||||| | || || ||||| || |||||| Sbjct 289343 CTTCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 289294 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || |||| ||||| |||| ||| | || ||||| || ||||| || || || | Sbjct 289750 TCCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGA 289691 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || || || || |||||| | || | |||||||||||| || || Sbjct 289690 TAGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGG 289631 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| |||||||| || || |||||| | || ||| |||| | || |||||| ||| | Sbjct 289630 AATGCCCTCTTTATCCTG-AATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCA 289572 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | || ||||| |||||||| | || || |||||||| |||||| Sbjct 289571 CTTCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522 >seq1305 Length=286731 Score = 123 bits (136), Expect = 2e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGA 29630 || ||||| | ||| | |||||||| ||||||||||| || || | |||| || || Sbjct 24770 CGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAGACAAT-GTACGTCC 24828 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | ||||| | |||||| || || |||||||| || || Sbjct 24829 ATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTT 24888 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | ||| ||| ||| |||||| ||| || || || || || || || || Sbjct 24889 ATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCACCTCGAGGGTAAT 24948 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||||| || || | ||| || || || || |||||| Sbjct 24949 GGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 24985 >seq2396 Length=191974 Score = 111 bits (122), Expect = 1e-19 Identities = 169/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 89727 GCAACTGGCCTTGCGCTTTGAAACAAAAACCTGAGCAGTTGGCGGATGCCGGtttttttt 89786 || |||||||| || | |||| || || |||||| | | || || || || || || | Sbjct 136566 GCGACTGGCCTCGCAGTATGAAGCAGAAGCCTGAGGAACTCGCCGAAGCGGGATTCTTCT 136625 Query 89787 ACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTTGCAACGGGGGCCTTAAGGATTGGG 89846 |||| ||||| || ||||| || | || |||| || |||| || || ||||| |||| Sbjct 136626 ACACCGGCCAGGGTGACAAAACTAAGTGCTTCTACTGTGACGGCGGACTCAAGGACTGGG 136685 Query 89847 AAGATGGCGATGAACCTTGGGAACAACATGCGCGCTGGTTTGATAATTGCATCTATGTTC 89906 | | | ||| | || ||||| || || ||||||||||| || ||| ||| || | Sbjct 136686 AGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGGTGCGCCTACGTGC 136745 Query 89907 AACTAGTAAAAGGACGCGATTACGTGCAAAATGTTATTTCGAACGCTTGCGTTATACCCG 89966 | || || ||||| || || ||||| || || || || || | || |||| | | |||| Sbjct 136746 AGCTGGTCAAAGGCCGAGAGTACGTCCAGAAGGTGATCACGGAAGCGTGCGCTCTCCCCG 136805 Query 89967 C 89967 | Sbjct 136806 C 136806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385198969852569