Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq3482 87.8 2e-12 >seq3482 Length=277542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 171/244 (70%), Gaps = 13/244 (5%) Strand=Plus/Minus Query 192433 CTATGGTTAAACAAGCCATTGG-GTTTA--TTCCTTGCCACAACTTAAAAACGGAAACAG 192489 |||||| ||||||||| || || || || || || | | | | | || ||| ||| Sbjct 267071 CTATGGGTAAACAAGCTATGGGCGTCTACATTACTAACTTCCATGTTAGAATGGATACAT 267012 Query 192490 TCTCTCATACATTAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAAATT 192547 | | ||| | | |||||||||| || || || || || ||| ||| | || || ||| Sbjct 267011 TAGCCCATGTACTCTATTATCCACATAAGCCCCTGGTCACAACACGATCTATGGAATATT 266952 Query 192548 TAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATAC 192607 || | ||||| || | || |||||| ||| |||||||||| || || || || Sbjct 266951 TACGAT-TTAGA-GAGTTGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACAC 266894 Query 192608 TGGCTATAACCAAGAAGACAGTATTATTTTAAATAAAGCTTC---TATTGAAAGAGGATT 192664 ||| || || |||||||| ||| | ||||||||| ||||| | ||||||||||||| Sbjct 266893 TGGATACAATCAAGAAGATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATT 266837 Query 192665 ATTT 192668 ||| Sbjct 266836 CTTT 266833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628497345738240