Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20 2012-03-01] 4,309 sequences; 273,786,188 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3424 217 3e-51 seq2787 206 5e-48 seq1305 122 2e-22 seq4254 91.5 3e-13 seq3341 91.5 3e-13 >seq3424 Length=494560 Score = 217 bits (240), Expect = 3e-51 Identities = 185/228 (81%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| || || |||| ||||| ||||||||||||||| || || ||||||||| Sbjct 289065 CCACCTCTCAGCCGTAGTACTAGGTGCAAAGTAGATTCTTTCTGAATGTTGTAATCAGAT 289006 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || ||||||||||| || |||||||| |||||||| || Sbjct 289005 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 288946 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||| || ||||| ||||| || ||||| ||||||||||| |||||| ||| || ||| Sbjct 288945 ATTCCCTCTTTATCCTGAATTTTCGCTTTAACATTTTCAATTGTATCAGAAGGCTCAACT 288886 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || |||||||| |||| |||||||| || || |||||| Sbjct 288885 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACGAAAATTTGCATT 288838 Score = 208 bits (230), Expect = 1e-48 Identities = 183/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||||| |||||| |||| |||||| || ||||| |||||||| || || Sbjct 290433 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 290374 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || ||||| ||||| ||||| || || || |||||||||||||||||||| Sbjct 290373 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290314 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||||||||||||||| || |||||||| || |||||| || ||| || Sbjct 290313 ATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCACC 290254 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || || || || |||| ||||||||||| || |||||| Sbjct 290253 TCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCATT 290206 Score = 208 bits (230), Expect = 1e-48 Identities = 183/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| | | ||||| | ||| || |||||||||||||| |||||||| || || Sbjct 290662 ACCACCTCTAAGTCTGAGAACAAGGTGAAGGGTAGATTCTTTCTGGATATTATAGTCTGA 290603 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| ||||| ||||| || || || |||||||||||||||||||| Sbjct 290602 TAATGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGG 290543 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || ||||||||||||||||||||||| || |||||||| || |||||| || ||| || Sbjct 290542 AATGCCTTCCTTATCTTGAATCTTTGCCTTAACATTTTCTATTGTATCAGAAGCTTCCAC 290483 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || || || || |||| ||||||||||| || ||||| Sbjct 290482 TTCCAAAGTGATAGTTTTCCCAGTCAGTGTCTTTACAAAAATTTGCAT 290435 Score = 205 bits (226), Expect = 2e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| ||||| || | ||||| ||| ||||| ||||| ||||| || |||||| Sbjct 289521 CCACCTCTCAGCCGCAGTACCAGGTGCAAAGTTGATTCCTTCTGAATATTGTAGTCAGAT 289462 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || ||||||||||| || |||||||| |||||||| || Sbjct 289461 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 289402 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || ||||| ||||| || || || ||||||||||| |||||| || ||| ||| Sbjct 289401 ATACCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 289342 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||||||| || |||||||| |||| ||||||||||| || |||||| Sbjct 289341 TCCAAAGTGATAGTCTTGCCAGTCAGTGTCTTTACAAAAATTTGCATT 289294 Score = 205 bits (226), Expect = 2e-47 Identities = 182/228 (80%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| ||||| || | |||| ||||||||| ||||| ||||| || |||||| Sbjct 289749 CCACCTCTCAGCCGCAGTACCAGATGCAAAGTAGATTCCTTCTGAATATTGTAGTCAGAT 289690 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| || || ||||||||||| || |||||||| |||||||| || Sbjct 289689 AGTGTGCGTCCATCTTCAAGCTGCTTTCCAGCAAAAATAAGTCTTTGCTGATCTGGGGGA 289630 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || || || ||||| ||||| || || || ||||||||||| |||||| || ||| ||| Sbjct 289629 ATGCCCTCTTTATCCTGAATTTTCGCCTTAACATTTTCAATTGTATCAGAAGCTTCCACT 289570 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||| || || |||||||| |||| |||||||||||||| |||||| Sbjct 289569 TCCAATGTGATAGTCTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289522 Score = 199 bits (220), Expect = 8e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || || | ||| | ||||||||||| ||||||||| ||||| |||||||| || || Sbjct 288837 CCACCCCTTAGACGTAAAACTAAGTGCAAAGTAGATTCCTTCTGGATATTATAGTCTGAG 288778 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || ||||| | ||| ||||| || || ||||||||||||||||||||||| Sbjct 288777 AGTGTGCGCCCATCTTCCAATTGCTTTCCGGCGAAAATTAGTCTTTGTTGATCTGGAGGG 288718 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| |||||||||||||| ||||| ||||| || |||||| || ||| ||| Sbjct 288717 ATGCCTTCCTTGTCTTGAATCTTTGCCTTTACGTTTTCGATTGTATCAGAAGCTTCCACT 288658 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTAT 82813 ||||| || || || || || || || || ||||| || || ||||| || Sbjct 288657 TCCAATGTGATGGTTTTCCCAGTTAAAGTTTTTACGAAGATTTGCATGAT 288608 Score = 199 bits (220), Expect = 8e-46 Identities = 181/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||||| ||| || ||||| || | ||||||||||||||| ||||| || || ||| Sbjct 289977 CCACCTCTCAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTGAT 289918 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 || | | || || || ||||| ||||||||||| || || |||||||| |||||||| Sbjct 289917 AGTGTACGTCCATCCTCAAGTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGA 289858 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||||||||| || || || |||||||| || || ||| || || ||| Sbjct 289857 ATGCCTTCCTTATCTTGAATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACT 289798 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || |||||||| |||| ||||| |||||||| |||||| Sbjct 289797 TCCAGTGTGATAGTCTTGCCAGTCAGTGTCTTCACAAATATTTGCATT 289750 Score = 194 bits (214), Expect = 3e-44 Identities = 179/227 (79%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || ||||| | ||||| |||||| |||| |||||| || ||||| |||||||| || || Sbjct 290205 CCACCTCTTAGACGCAAAACTAAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGAC 290146 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 | | | || ||||| ||||| ||||| || || || |||||||||||||||||||| Sbjct 290145 AATGTGCGTCCATCTTCCAGTTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGA 290086 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || |||||||| |||||||||||||| || |||||||| || || ||| || || ||| Sbjct 290085 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCACT 290026 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || || ||||| ||||| || || ||||| || ||||| Sbjct 290025 TCCAAGGTAATAGTTTTGCCAGTCAATGTTTTCACAAAAATTTGCAT 289979 Score = 187 bits (206), Expect = 5e-42 Identities = 171/216 (79%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 ||||| || ||||||| ||||||||| || || ||||||||||| || || | | || Sbjct 289281 CGCAGCACCAAGTGCAAAGTAGATTCCTTTTGAATATTATAATCTGACAGTGTACGTCCA 289222 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || |||||||| ||||| || || || ||||| || ||||| || ||||| || Sbjct 289221 TCTTCCAGCTGTTTTCCTGCAAAAATAAGCCTCTGTTGGTCAGGAGGAATGCCTTCTTTG 289162 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 |||||||| ||||| || |||||||| || |||||| || || |||||||| || || Sbjct 289161 TCTTGAATTTTTGCCTTAACATTTTCTATTGTATCAGAAGCCTCCACTTCCAATGTGATA 289102 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || ||||| |||| |||||||||||||| |||||| Sbjct 289101 GTTTTGCCAGTCAGTGTCTTTACAAATATTTGCATT 289066 >seq2787 Length=76071 Score = 206 bits (228), Expect = 5e-48 Identities = 180/224 (80%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||||| || ||||| |||||||||||||| || |||||||| ||||| ||| | | || Sbjct 39722 ACGCAATACCAAGTGAAGAGTAGATTCTTTTTGAATATTATAGTCAGAAAGAGTGCGTCC 39663 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| | ||| |||||||| || || | | ||||||||||||||| || |||||||| Sbjct 39662 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 39603 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||||| || ||||||||||||||||| ||||| |||||| ||||||||||| || Sbjct 39602 GTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGAAGGTTCAACTTCCAAAGTAAT 39543 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATAT 82818 || || || || | || || ||||| ||||||||| | |||| Sbjct 39542 GGTTTTACCCGTAAGTGTTTTCACAAAGATCTGCATTTTGATAT 39499 Score = 203 bits (224), Expect = 6e-47 Identities = 183/230 (80%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||| | ||| || || ||||| || || || |||||||| ||||| || |||| Sbjct 41103 TACCTCCTCGGAGACGGAGTACCAAGTGAAGGGTCGACTCTTTCTGGATATTGTAGTCAG 41044 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| |||||||| ||||| ||||| || | |||||||||||||| Sbjct 41043 ACAGGGTGCGGCCATCTTCCAGTTGTTTACCAGCGAAGATAAGACGTTGTTGATCTGGAG 40984 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||||||||||||||| ||||| ||||||||||| || || || || | Sbjct 40983 GAATTCCTTCCTTATCTTGAATCTTAGCTTTAACATTTTCAATGGTGTCTGATGGCTCAA 40924 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||||||||||| || || || || | || || |||||||| |||||| Sbjct 40923 CTTCCAAAGTTATTGTTTTTCCAGTAAGTGTTTTGACAAATATTTGCATT 40874 Score = 201 bits (222), Expect = 2e-46 Identities = 182/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || |||||| ||||| || || ||||| ||||| || || || || |||| Sbjct 40647 TACCACCTCGCAGACGCAGTACTAAATGAAGGGTAGACTCTTTTTGGATGTTGTAGTCAG 40588 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| |||||||| || || ||||||||||| || | |||||||||||| | Sbjct 40587 ACAGGGTGCGACCATCTTCTAGCTGCTTGCCAGCAAAGATAAGACGTTGTTGATCTGGGG 40528 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || |||||||||||||| || |||||||||||||| || ||| || || | Sbjct 40527 GAATACCCTCTTTATCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCAGATGGCTCCA 40468 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| |||||| ||||||||||| | ||||| |||||||| ||||| Sbjct 40467 CCTCCAGAGTTATAGTCTTGCCTGTTAGTGTCTTGACAAATATTTGCAT 40419 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| ||||| ||||| || |||||||||| |||||||||||| || || || || |||| Sbjct 40191 TACCACCTCTTAAACGAAGTACTAAGTGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 40132 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||||| ||| || || ||||| || || | ||||||||| |||| Sbjct 40131 ACAGTGTACGACCATCTTCTAATTGCTTGCCCGCAAAAATAAGACGTTGTTGATCCGGAG 40072 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||| || ||||| || || ||||| ||||||||||| || ||| || ||| | Sbjct 40071 GAATGCCTTCTTTGTCTTGGATTTTAGCTTTCACATTTTCAATTGTGTCAGAAGCTTCAA 40012 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| ||||| || || || || || | || || ||||| || ||||| Sbjct 40011 CTTCTAAAGTAATTGTTTTTCCAGTGAGTGTTTTAACAAAGATTTGCAT 39963 Score = 179 bits (198), Expect = 7e-40 Identities = 177/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||||| ||||| | |||||||||| ||| || |||||||| ||||| || |||| Sbjct 41331 TACCTCCTCGTAAACGTAATACTAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAG 41272 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || || || || ||||| || || || | |||||||||||| | Sbjct 41271 AAAGAGTACGCCCATCCTCCAGCTGCTTGCCAGCGAAAATGAGACGTTGTTGATCTGGGG 41212 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || ||||| ||||| ||||| ||||||||||| || || ||||| | Sbjct 41211 GAATACCCTCTTTGTCTTGGATCTTGGCTTTAACATTTTCAATAGTGTCTGAGGGTTCAA 41152 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || || || ||||||| ||||||||||| |||||||| Sbjct 41151 CTTCTAATGTGATAGTTTTCCCTGTCAGTGTCTTTACAAAGATCTGCAT 41103 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 |||| ||||| || || |||||||| || || |||||||||||||||| | | || Sbjct 39949 CGCAATACTAAATGTAGGGTAGATTCCTTTTGAATATTATAATCAGATAATGTACGGCCA 39890 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||||||||||||||||||||| || || || ||||||||||| || || || || || Sbjct 39889 TCTTCTAGTTGTTTTCCAGCAAAAATAAGCCTCTGTTGATCTGGGGGAATACCCTCTTTG 39830 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| |||||||| || |||||||| || || || || ||||| || ||||| || Sbjct 39829 TCTTGGATCTTTGCCTTCACATTTTCGATAGTGTCGGACGGCTCTACCTCTAAAGTGATG 39770 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 || || ||||| | ||||| ||||| ||||||||| Sbjct 39769 GTTTTTCCTGTAAGAGTCTTAACAAAGATCTGCATT 39734 Score = 178 bits (196), Expect = 3e-39 Identities = 169/216 (78%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || ||||||||||| || || |||||||| ||||| |||||||| | | | | ||| Sbjct 40862 ACGAAGCACTAAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACC 40803 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| | ||| ||||||||||| || || | |||||| ||||| || || || ||||| Sbjct 40802 ATCTTCCAATTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTT 40743 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || || || ||||| ||||| || || || ||| ||||||||||||| || || Sbjct 40742 ATCCTGTATTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAAT 40683 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || ||||| || || |||||||| ||||| Sbjct 40682 GGTCTTTCCAGTCAATGTTTTGACAAATATTTGCAT 40647 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||| || |||||| |||| || || ||||| || ||||| || || || |||| Sbjct 40419 TACCACCTCGCAGACGCAGTACTAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 40360 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||| ||||| | ||| || ||||||||||| || | || ||||| || | Sbjct 40359 ACAGGGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTG 40300 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || || || ||||| || || ||||||||||||||||| |||||| ||||| | Sbjct 40299 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 40240 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||||| || || ||||| || || | || || ||||| |||||||| Sbjct 40239 CTTCCAGGGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 40191 Score = 159 bits (176), Expect = 7e-34 Identities = 165/216 (76%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || ||||| |||| |||||||||||| || || ||||| || || ||| | | || Sbjct 41546 ACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTATAGTCCGACAGAGTGCGGCC 41487 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || |||| ||||| ||||||||||| || | ||||| ||||| || || || ||||| Sbjct 41486 ATCCTCTAACTGTTTACCAGCAAAGATGAGACGCTGTTGGTCTGGGGGAATGCCCTCCTT 41427 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 |||||| ||||| || || |||||||| || || || || || || |||||||| || Sbjct 41426 ATCTTGGATCTTAGCCTTAACATTTTCGATAGTGTCGGATGGCTCCACCTCCAAAGTGAT 41367 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || | ||||| ||||| |||||||| Sbjct 41366 GGTCTTCCCAGTAAGAGTCTTAACAAAGATCTGCAT 41331 >seq1305 Length=286731 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 ||||||| | | || || || | |||| || ||||| || || || || || |||| Sbjct 24756 TACCTCCGCGAAGTCGAAGCACAAGATGCAATGTGGATTCCTTTTGAATGTTGTAGTCAG 24815 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | || |||||||||||||| ||||||||||| | | ||| || ||||| | Sbjct 24816 ACAATGTACGTCCATCTTCTAGTTGTTTACCAGCAAAGATCAAACGTTGCTGGTCTGGTG 24875 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||||||||| || || |||||||||||||| || ||||| | || | Sbjct 24876 GAATACCTTCCTTATCTTGGATTTTAGCTTTTACATTTTCTATAGTATCGGAGGCCTCCA 24935 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | || | || || || || || || | ||||| || || || |||||| Sbjct 24936 CCTCGAGGGTAATGGTTTTACCCGTAAGGGTCTTGACGAAAATTTGCATT 24985 >seq4254 Length=614577 Score = 91.5 bits (100), Expect = 3e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 197736 CAAGTAGACGCTCATAATATAGTACCTTGTTGGGAAGCTTCTTACAAAGAAGAATACGGT 197795 || ||||| ||||| ||| | || || ||||||| |||||| | ||| | ||||| Sbjct 227669 CAGGTAGATGCTCACAATGTGGTGCCATGTTGGGTGGCTTCTGATAAACAGGAATATTCA 227728 Query 197796 GCAAGAACTTTAAGAAAAAAGATATTTGATAAATTATATGAATATATGACAGAATTTCCT 197855 |||||||| ||||||| || || | ||||||| |||||||| | |||||||||||| Sbjct 227729 GCAAGAACAATAAGAAATAAAATCAATTCTAAATTAGATGAATATCTCACAGAATTTCCT 227788 Query 197856 GTTGTACGTAAACATCCATA 197875 || ||||||||| || Sbjct 227789 CCAGTTATTAAACATCCTTA 227808 >seq3341 Length=242222 Score = 91.5 bits (100), Expect = 3e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 144075 GGTATATGCGATAATTTACTAACATCTATAGTAAGAGCCTGGGATATAAATAAACCTCTT 144134 |||||||| || |||||| | |||| || ||| |||| ||||| | || || ||| Sbjct 79007 GGTATATGTGACAATTTATTGACATGTACAGTCCGAGCGTGGGACTTCTCAAAGCCACTT 79066 Query 144135 ATTTTTTGCCCCGCTATGAATACCCTTATGTGGGAACATCCTATTACAGAAAAACATATA 144194 | || || || || ||||| || ||||||||||||||||||||| ||||| ||| Sbjct 79067 GTATTCTGTCCTGCAATGAACACTAGAATGTGGGAACATCCTATTACATCTAAACAAATA 79126 Query 144195 GATACTTTAAAACATATGGG-TTTCATAGAAATAGAATGTATAGaaaaaaaaCTAGCCTG 144253 ||| |||||| || ||| ||||| |||||| ||| |||| || || Sbjct 79127 GATGTTTTAAAGGATTGGGGCTTTCA-AGAAATTCCTCCAATAAGTAAAACTTTAATGTG 79185 Query 144254 TGGAGACGTAGGAAATGGTGCTATGGCAGAAGTT 144287 |||||| ||| ||||| |||||||||||| Sbjct 79186 TGGAGATACAGGTGTTGGTGGAATGGCAGAAGTT 79219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981772994240751