Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq1590 96.9 5e-15
seq3499 95.1 2e-14
seq3441 95.1 2e-14
seq2916 95.1 2e-14
seq2630 95.1 2e-14
seq2566 95.1 2e-14
seq2201 95.1 2e-14
seq835 95.1 2e-14
seq1915 91.5 2e-13
seq3467 87.8 2e-12
seq2205 87.8 2e-12
seq2666 86.0 8e-12
seq2649 86.0 8e-12
seq2288 86.0 8e-12
seq1517 86.0 8e-12
seq1367 86.0 8e-12
seq1326 86.0 8e-12
seq1176 86.0 8e-12
seq905 86.0 8e-12
seq462 86.0 8e-12
seq4044 84.2 3e-11
>seq1590
Length=469570
Score = 96.9 bits (106), Expect = 5e-15
Identities = 68/78 (87%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 8652 CCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTT 8711
|| || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||
Sbjct 295136 CCATAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTT 295077
Query 8712 CGATTCCCCGACGAGGAG 8729
|||||||||| || ||||
Sbjct 295076 CGATTCCCCGCCGGGGAG 295059
Score = 93.3 bits (102), Expect = 6e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 295059 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 295118
Query 139413 TACTAACGAGGATTTTGGT 139431
||||| |||||||| ||||
Sbjct 295119 TACTACCGAGGATTATGGT 295137
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 295130 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 295071
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 295070 CCCGCCGGGGAG 295059
>seq3499
Length=972244
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 130624 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 130565
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 130564 CCCGCCGGGGAG 130553
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 130624 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 130565
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 130564 CCCGCCGGGGAGG 130552
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 130553 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 130612
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 130613 TACTACCGAGGAT 130625
>seq3441
Length=658075
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 269771 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 269712
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 269711 CCCGCCGGGGAG 269700
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 269774 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 269715
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 269714 TTCCCCGCCGGGGAG 269700
Score = 89.7 bits (98), Expect = 7e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 269700 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 269759
Query 139413 TACTAACGAGGATT 139426
||||| ||||||||
Sbjct 269760 TACTACCGAGGATT 269773
>seq2916
Length=227238
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 155374 TAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 155433
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 155434 TTCCCCGCCGGGGAG 155448
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 155377 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 155436
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 155437 CCCGCCGGGGAG 155448
Score = 89.7 bits (98), Expect = 7e-13
Identities = 66/77 (86%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 155448 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 155389
Query 139413 TACTAACGAGGATTTTG 139429
||||| |||||||| ||
Sbjct 155388 TACTACCGAGGATTATG 155372
>seq2630
Length=1043321
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 95161 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 95220
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 95221 CCCGCCGGGGAG 95232
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 95161 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 95220
Query 11789 CCCGACGAGGAGGGA 11803
|||| || |||| ||
Sbjct 95221 CCCGCCGGGGAGAGA 95235
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 95232 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 95173
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 95172 TACTACCGAGGAT 95160
>seq2566
Length=974290
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 870352 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 870411
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 870412 CCCGCCGGGGAG 870423
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 870349 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 870408
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 870409 TTCCCCGCCGGGGAG 870423
Score = 89.7 bits (98), Expect = 7e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 870423 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 870364
Query 139413 TACTAACGAGGATT 139426
||||| ||||||||
Sbjct 870363 TACTACCGAGGATT 870350
>seq2201
Length=540919
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 310289 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 310230
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 310229 CCCGCCGTGGAG 310218
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 310289 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 310230
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 310229 CCCGCCGTGGAG 310218
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 310218 CTCCACGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 310277
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 310278 TACTACCGAGGAT 310290
>seq835
Length=305099
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 198185 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 198126
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 198125 CCCGCCGGGGAG 198114
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 198185 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 198126
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 198125 CCCGCCGGGGAG 198114
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 198114 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 198173
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 198174 TACTACCGAGGAT 198186
>seq1915
Length=142511
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11728 AGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786
|||| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||
Sbjct 94572 AGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 94631
Query 11787 TCCCCGACGAGGAGG 11801
|||||| || |||||
Sbjct 94632 TCCCCGCCGGGGAGG 94646
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 94574 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 94633
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 94634 CCCGCCGGGGAG 94645
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 94645 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 94586
Query 139413 TACTAACGAGGATTT 139427
||||| ||| || ||
Sbjct 94585 TACTACCGAAGACTT 94571
>seq3467
Length=704531
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/70 (89%), Gaps = 1/70 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 7618 CAGTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 7677
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 7678 TTCCCCGCCG 7687
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 7621 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 7680
Query 8718 CCCGACG 8724
|||| ||
Sbjct 7681 CCCGCCG 7687
>seq2205
Length=65158
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/70 (89%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
||||| ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 16148 CAGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 16089
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 16088 TTCCCCGCCG 16079
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 3810 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3751
Query 8718 CCCGACG 8724
|||| ||
Sbjct 3750 CCCGCCG 3744
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 16145 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 16086
Query 8718 CCCGACG 8724
|||| ||
Sbjct 16085 CCCGCCG 16079
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||
Sbjct 3737 AACTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 3796
Query 139411 TATACTAACGAGGAT 139425
||||||| ||| |||
Sbjct 3797 TATACTACCGAAGAT 3811
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 3810 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3751
Query 11789 CCCGACG 11795
|||| ||
Sbjct 3750 CCCGCCG 3744
>seq2666
Length=173588
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 101108 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 101049
Query 8718 CCCGACG 8724
|||| ||
Sbjct 101048 CCCGCCG 101042
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 106868 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 106809
Query 8718 CCCGACG 8724
|||| ||
Sbjct 106808 CCCGCCG 106802
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||
Sbjct 101035 AACTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 101094
Query 139411 TATACTAACGAGGAT 139425
||||||| ||| |||
Sbjct 101095 TATACTACCGAAGAT 101109
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 101108 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 101049
Query 11789 CCCGACG 11795
|||| ||
Sbjct 101048 CCCGCCG 101042
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||
Sbjct 106795 AACTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 106854
Query 139411 TATACTAACGAGGAT 139425
||||||| ||| |||
Sbjct 106855 TATACTACCGAAGAT 106869
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 106868 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 106809
Query 11789 CCCGACG 11795
|||| ||
Sbjct 106808 CCCGCCG 106802
>seq2649
Length=242434
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 103003 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 103062
Query 8718 CCCGACG 8724
|||| ||
Sbjct 103063 CCCGCCG 103069
Score = 82.4 bits (90), Expect = 1e-10
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 139358 CGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATACTA 139417
|| |||||| |||||||||||||||||| | |||| |||||||| | ||||||||||||
Sbjct 103069 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 103010
Query 139418 ACGAGGATTTTGGTA 139432
||| |||| || ||
Sbjct 103009 CCGAAGATTGTGATA 102995
Score = 82.4 bits (90), Expect = 1e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 103000 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 103059
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 103060 TTCCCCGCCG 103069
>seq2288
Length=132835
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 13644 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13703
Query 8718 CCCGACG 8724
|||| ||
Sbjct 13704 CCCGCCG 13710
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 13644 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 13703
Query 11789 CCCGACG 11795
|||| ||
Sbjct 13704 CCCGCCG 13710
>seq1517
Length=35327
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 21858 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 21799
Query 8718 CCCGACG 8724
|||| ||
Sbjct 21798 CCCGCCG 21792
Score = 82.4 bits (90), Expect = 1e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 21861 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 21802
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 21801 TTCCCCGCCG 21792
>seq1367
Length=102154
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 50700 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 50759
Query 8718 CCCGACG 8724
|||| ||
Sbjct 50760 CCCGCCG 50766
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 51380 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 51321
Query 8718 CCCGACG 8724
|||| ||
Sbjct 51320 CCCGCCG 51314
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 53318 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 53259
Query 8718 CCCGACG 8724
|||| ||
Sbjct 53258 CCCGCCG 53252
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 50700 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 50759
Query 11789 CCCGACG 11795
|||| ||
Sbjct 50760 CCCGCCG 50766
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 51380 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 51321
Query 11789 CCCGACG 11795
|||| ||
Sbjct 51320 CCCGCCG 51314
Score = 82.4 bits (90), Expect = 1e-10
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 139358 CGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTATACTA 139417
|| |||||| |||||||||||||||||| | |||| |||||||| | ||||||||||||
Sbjct 53252 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 53311
Query 139418 ACGAGGATTTTGGTACA 139434
||| || | |||||||
Sbjct 53312 CCGAAGA-TGTGGTACA 53327
Score = 82.4 bits (90), Expect = 1e-10
Identities = 66/77 (86%), Gaps = 2/77 (3%)
Strand=Plus/Minus
Query 11720 TGTAACCCAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGG 11778
|||| | || || ||| ||||||||||||| |||| |||| ||||| | |||||||||||
Sbjct 53327 TGTACCACA-TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGG 53269
Query 11779 GGTTCGATTCCCCGACG 11795
|||||||||||||| ||
Sbjct 53268 GGTTCGATTCCCCGCCG 53252
>seq1326
Length=586218
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||| ||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 400527 GTCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 400586
Query 11788 CCCCGACGAGGAGG 11801
||||| || ||||
Sbjct 400587 CCCCGCCGGAGAGG 400600
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 400528 TCTTCGGTAGTATAGTGGTCAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 400587
Query 8718 CCCGACG 8724
|||| ||
Sbjct 400588 CCCGCCG 400594
>seq1176
Length=33059
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 27307 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27248
Query 8718 CCCGACG 8724
|||| ||
Sbjct 27247 CCCGCCG 27241
Score = 84.2 bits (92), Expect = 3e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410
||||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||
Sbjct 27234 AACTCTCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 27293
Query 139411 TATACTAACGAGGATT 139426
||||||| ||| ||||
Sbjct 27294 TATACTACCGAAGATT 27309
Score = 82.4 bits (90), Expect = 1e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 27310 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 27251
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 27250 TTCCCCGCCG 27241
>seq905
Length=23872
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 2119 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 2060
Query 8718 CCCGACG 8724
|||| ||
Sbjct 2059 CCCGCCG 2053
Score = 82.4 bits (90), Expect = 1e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 2122 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 2063
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 2062 TTCCCCGCCG 2053
>seq462
Length=121246
Score = 86.0 bits (94), Expect = 8e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 88125 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 88066
Query 8718 CCCGACG 8724
|||| ||
Sbjct 88065 CCCGCCG 88059
Score = 82.4 bits (90), Expect = 1e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 88128 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 88069
Query 11786 TTCCCCGACG 11795
||||||| ||
Sbjct 88068 TTCCCCGCCG 88059
>seq4044
Length=174331
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|| ||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 168723 TCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 168664
Query 8718 CCCG 8721
||||
Sbjct 168663 CCCG 168660
Score = 82.4 bits (90), Expect = 1e-10
Identities = 59/67 (88%), Gaps = 1/67 (1%)
Strand=Plus/Minus
Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| || ||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||
Sbjct 168726 CAATCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 168667
Query 11786 TTCCCCG 11792
|||||||
Sbjct 168666 TTCCCCG 168660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652809636146960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |