Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3463 215 5e-51
seq2787 102 8e-17
seq3345 96.9 3e-15
seq3424 95.1 1e-14
seq2299 82.4 7e-11
>seq3463
Length=282612
Score = 215 bits (238), Expect = 5e-51
Identities = 775/1199 (65%), Gaps = 25/1199 (2%)
Strand=Plus/Minus
Query 24794 GTGGCGGCGTACTTTGTCGAGTGGGGTGTGTACCCGCGCCAGTTTCCCGTCGACAAGGTG 24853
|||| || ||||| || || |||||||| || || | | || ||||| || |
Sbjct 183015 GTGGGTGCCTACTTCGTAGAATGGGGTGTCTATCCTAGGAAATTCCCCGTGGATCGTATA 182956
Query 24854 CCCGCGCCCAACCTCTCGCACTTGCTCTACGGCTTTGTGCCCATCTGCGGCGGCGCGGGC 24913
|| || || || | || ||||||||||||||| | || || |||||||| | |||
Sbjct 182955 CCTATACCTAATCTTACTCATTTGCTCTACGGCTTTATCCCAATTTGCGGCGGTGACGGC 182896
Query 24914 ATCAACGATGCGCTAAAAACTGTGCCGGGCAGCTTCGAGGCGCTGCAACGATCGTGCGCC 24973
||||| ||| ||||| | ||||| ||| | || || || || || || |
Sbjct 182895 ATCAATGATAGTTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTACAGCGGTCCTGTAGC 182836
Query 24974 GGCCGCGCCGACTTCAAGGTGGCCATCCACGATCCGTGGGCGGCCATACAGAAACCGCAG 25033
||||| | |||||||| || | ||||||||||| ||||| || |||| ||||| ||
Sbjct 182835 GGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAA 182776
Query 25034 AAAGGCGTGTCCGCGTGGAACGAGCCGTACAAGGGCAACTTTGGCCAGCTGATGGCGCTG 25093
||||| |||| | ||||||||||| ||||| |||||||||||||| | ||| | ||
Sbjct 182775 AAAGGATTGTCTTCATGGAACGAGCCTTACAAAGGCAACTTTGGCCAATTAATGTCACTA 182716
Query 25094 AAGCGCGCCTACCCGCACCTCAAAGTGCTGCCCTCGATCGGCGGCTGGACGCTGTCCGAC 25153
|| | ||| ||| | | || | || ||||| || || || |||||||| ||||
Sbjct 182715 AAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCTATTGGTGGGTGGACGCTTGCCGAT 182656
Query 25154 CCGTTCTTCCACATGCACGACAAGGCGGCGCGCCAGACG-TTTATCGACTCGGTGCAAGA 25212
|| |||||| | ||||| | | | | ||| ||| | | || || | ||
Sbjct 182655 CCTTTCTTCTTTTTAGTTGACAAATCTAAGAG-AACACGATTTGTGCAGTCAGTAAAGGA 182597
Query 25213 GTACCTCGTCACCTGGAAGTTCTTTGACGGCGTCGACCTCGATTGGGAGTTTCCCGGCGG 25272
|| || | || ||||| ||||| || || || || ||||||||||||| || || ||
Sbjct 182596 GTTTCTTCTAACATGGAAATTCTTCGATGGTGTTGATATCGATTGGGAGTTCCCTGGTGG 182537
Query 25273 CAAGGGCGCCAACCCGGACGTGGGCAACGCCGAGCGCGATCGCGCCACCTACACTACCCT 25332
||| || || ||||| ||| | || | ||| || ||| | | || | |
Sbjct 182536 CAAAGGTGCTAACCCTGACCTCGGTA--GCCCAG-AAGATGGTGATTGTTATGTAAGTTT 182480
Query 25333 GTTGGCGGAGCTGCGCGCGATGCTCGACGCGCTCGGTGCCCACCAAAACCGCCACTACCT 25392
| || || | || | ||||||||||| |||| || | | | |||
Sbjct 182479 GATGAAAGAATTACGTGAGATGCTCGACGAGCTCTCAGCTAAGAATGGTAAGAAATACGA 182420
Query 25393 GCTCACTAGCGCGATTAGCGCGGGCAACGACAAGATCGCCGTCGTCGACTACACTGAGGC 25452
| ||| || |||||||| || || || ||| || || ||||| ||||
Sbjct 182419 ATTAACTTCTGCTATTAGCGCTGGATGGGATAAAATCCAAGTTGTAGACTATGGCAAGGC 182360
Query 25453 GCAAAAGTATCTCGATCTGATATTCCTCATGTCGTACGATTTTAAGGGCGGCTGGTCGCT 25512
||||| ||| | |||| || ||| | ||| ||||| || ||||| | ||||||
Sbjct 182359 TCAAAATTATATGGATCATATTTTCTTGATGAGTTACGACTTCAAGGGAGCCTGGTCAAA 182300
Query 25513 CAACGAGCTCGGTCATCAGACGGCGCTTTACGCGCCCCCGTGGCGGCCCGACGAACCGTA 25572
|| || || ||||| ||| | | |||||||| ||||| ||| | ||| | ||
Sbjct 182299 TGACACTCTTGGACATCAAACGCCATTGTACGCGCCAGCGTGGAATCCCAAGGAAACTTA 182240
Query 25573 CTGCGCGGACCGCGCGGTCGAGGCGCTGCTCGCGCAACACGTG---CCCAAGAACAAGAT 25629
| | ||| || || | |||| ||||| ||| || ||| |||||
Sbjct 182239 CACATCTGACTTCGGAGTAAAATACTTGCTGGCGCAGGGAGTGAATCCTAAG---AAGAT 182183
Query 25630 TGTGCTGGGCGTTGCCATGTACGGCCGCGGCTGGACGGGCGT---AGCGAGCGACGACAG 25686
||| | || ||||| ||||| || || || ||||| ||||| | | | ||||
Sbjct 182182 TGTAGTAGGTGTTGCTATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACAAAGACA- 182124
Query 25687 CGACAATCCATTCTTGGGCACCGCCACCGGTCCCGTCCCCGGCACCTGGGAGGACGGCGT 25746
||| ||| ||| |||| ||| || || || ||| || || ||| | ||||| ||
Sbjct 182123 --ACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGAACTTGGCAAGACGGAGT 182066
Query 25747 CGTCGACTATCGACAGATTGC---TCACAAC-CTCACG--CAGTACACGTACGCGTACGA 25800
|| |||||| | ||||||| | | | | |||| | ||| || | |||||
Sbjct 182065 GGTTGACTATAGGGAGATTGCGAATGAAATCGCTCAAGGCAAGTGGGAGTTCCATTACGA 182006
Query 25801 CGACGTTGCCAAGGCGGCGTACATTTATCGCGCATCCGACGG-CAACTTGATTAGCTACG 25859
| | || ||| | || | ||| | | | |||| || | |||| | | ||| |
Sbjct 182005 CAATGTCGCCCAAGCCCCTTACGTCTTCAGACCATCAACTGGAGATCTTG-TAACCTATG 181947
Query 25860 ACGACGCTGCCTCGGTCACCGCCAAGGCCAAATATGTATTGGACCACGAGCTGGCCGGTC 25919
| | ||| ||||| | | |||| ||||||||| | || |||| | ||||
Sbjct 181946 ATAATGCTAGATCGGTTATTGAAAAGGGTAAATATGTAAGAAATAACAAGCTAGGTGGTC 181887
Query 25920 TGTTTGCCTGGGAAATTGACGCCGACAACGGTGACCTGCTCAACGCCATGAACAAGGGT 25978
| ||||| |||||| | ||||| || ||||||||||| || || |||||||||| ||||
Sbjct 181886 TCTTTGCTTGGGAAGTGGACGCTGATAACGGTGACCTACTGAATGCCATGAACATGGGT 181828
>seq2787
Length=76071
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523
|||||||||||||| |||||||| || | || | ||||| |||||||||||
Sbjct 41299 GTGGACTCTTTCTGAATATTGTAGTCAGAAAGAGTACGCCCATCCTCCAGCTGCTTGCCA 41240
Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583
||| ||||||| || || || || || || || || || ||||| |||| || ||||
Sbjct 41239 GCGAAAATGAGACGTTGTTGATCTGGGGGAATACCCTCTTTGTCTTGGATC-TTGGCTTT 41181
Query 133584 AGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | | |||| ||||| | ||| || || || | |||| ||||| || ||||| ||
Sbjct 41180 AACATTTTCAATAGTGTCTGAGGGTTCAACTTCTAATGTGATAGTTTTCCCTGTCAGTGT 41121
Query 133643 TTTTACGAAAATCTGCAT 133660
||||| || ||||||||
Sbjct 41120 CTTTACAAAGATCTGCAT 41103
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||||||||| ||||||||||| || ||| ||| | || || |
Sbjct 40852 AAGTGCAGGGTTGACTCTTTCTGAATATTGTAATCAGACAAAGTGCGACCA-TCTTCCAA 40794
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || || ||||||| || || ||||| || |||||||| ||||| || ||
Sbjct 40793 TTGCTTTCCAGCAAAAATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTATC-CTGTA 40735
Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| || |||| | ||| | ||||| | || || || || | ||| | ||| || |
Sbjct 40734 TTTTAGCTTTGACATTCTCGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTC 40675
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| |||| ||||| || || || |||||
Sbjct 40674 CAGTCAATGTTTTGACAAATATTTGCAT 40647
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| ||||| || ||||| || || ||| ||| | || || | |
Sbjct 40394 ATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCA-TCTTCCAATT 40336
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | || || |||||||| || || |||||||| || ||||| ||| |
Sbjct 40335 GCTTACCAGCAAAGATAAGACGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGAT-T 40277
Query 133576 TTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| |||| | | |||| || || | ||| ||||| || | ||| | ||| || ||
Sbjct 40276 TTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGGGTAATGGTCTTTCCA 40217
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| || ||||| || |||||||||||
Sbjct 40216 GTTAGGGTTTTAACAAAAATCTGCAT 40191
>seq3345
Length=207354
Score = 96.9 bits (106), Expect = 3e-15
Identities = 251/383 (66%), Gaps = 0/383 (0%)
Strand=Plus/Minus
Query 148311 GTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATG 148370
||||| |||||||| || || ||||||| | ||| || || || | || || |||||
Sbjct 112987 GTAAAGGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATT 112928
Query 148371 TACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCC 148430
|||| || || || ||||||||||| | ||| ||| || || || || |||
Sbjct 112927 GGAGCTATCAATAGAGAATTGCGCAAACCATGTTTTGCTATCTTTTCTTTGAGGGCAGCC 112868
Query 148431 CAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTA 148490
|||||||| || | || || || |||||| || ||||| || || || ||||
Sbjct 112867 CAGTCCCAAAGGTCTGTAGGAGTTTTGTCCCACATATCATACTGGAGGATACCTTGGCTT 112808
Query 148491 GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCC 148550
|| || || || | || | |||||| | || | | || | ||| || || ||
Sbjct 112807 GCTGGACTCCCTTGATATGTGCTGTATGCACCTTCTTTTTCAGCTAATTCACAACTAGCT 112748
Query 148551 TCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCG 148610
|| | || || || ||||| || || ||||| ||||| || || |||
Sbjct 112747 TCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTGAGAAGTATTGCTTTCTCA 112688
Query 148611 CTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCA 148670
|||||||| | || | || | ||||||||| || || | |||||| || || | |||
Sbjct 112687 CTTTCGTAAGAAATTCTCATCAACACAAACGCATCTGCCATGCCCTGAACACCAATACCA 112628
Query 148671 ATGGGCCGGTGTTTAATGTTGGA 148693
|| || | ||| | || || ||
Sbjct 112627 ATAGGTCTATGTCTCATATTTGA 112605
>seq3424
Length=494560
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAG--TCCTCGA 133512
||||||| || || |||||||| |||||||| || || ||| ||| ||||| |
Sbjct 289956 AAATGTAAAGTAGATTCTTTCTGAATATTGTAGTCTG--ATAGTGTACGTCCATCCTCAA 289899
Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572
| ||||| || || |||| |||| || ||||| ||||| ||||||||||| || |||
Sbjct 289898 GTTGCTTTCCAGCAAAAATAAGCCTTTGTTGGTCTGGAGGAATGCCTTCCTTATC-TTGA 289840
Query 133573 TCTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631
||| | ||| | | || | ||||| | |||||| || || | |||| || |||
Sbjct 289839 ATTTTGGCCTTAACATTTTCGATTGTGTCAGAGGGCTCAACTTCCAGTGTGATAGTCTTG 289780
Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || || || || |||||
Sbjct 289779 CCAGTCAGTGTCTTCACAAATATTTGCAT 289751
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/207 (71%), Gaps = 2/207 (1%)
Strand=Plus/Minus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || ||||| ||||| ||||| || || || ||| | | | || || ||
Sbjct 290184 AAATGCAAAGTAGACTCCTTCTGGATATTATAGTCCGACAATGTGCGTCCA-TCTTCCAG 290126
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || ||| |||| || | || || || ||||| |||||||||||||| ||
Sbjct 290125 TTGCTTTCCGGCGAAAATCAGTCTTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAAT 290066
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
|||| ||| | | || | ||||| | | |||||| || | ||| | ||||||||
Sbjct 290065 CTTTGCCTTAACATTTTCTATTGTGTCAGAAGCCTCCACTTCCAAGGTAATAGTTTTGCC 290006
Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660
|||| ||||| || ||||| |||||
Sbjct 290005 AGTCAATGTTTTCACAAAAATTTGCAT 289979
>seq2299
Length=578019
Score = 82.4 bits (90), Expect = 7e-11
Identities = 102/140 (73%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 116473 CACGGCTTCCACGTGCACGAGTTTGGCGACACCAGCAACGGCTGCACCTCCGCCGGCGAA 116532
|| ||||| ||||||||||||||||| |||| || || ||||||||||| || ||
Sbjct 369294 CATGGCTTTCACGTGCACGAGTTTGGTGACAACACAAATGGCTGCACCTCAGCTGGTCCT 369353
Query 116533 CACTTCAACCCCACCGGCCAGGACCACGGCGCGCCCAACGCCGCCGTTCGTCACGTCGGT 116592
|||||||| || ||||||| || | ||| || | | || | || || |||
Sbjct 369354 CACTTCAATCCTCTAAAAAAGGACCATGGAGGTCCCGACTCGTCGGTCAGACATGTTGGT 369413
Query 116593 GACCTGGGCAACATTGAGGC 116612
||| |||| |||||||||||
Sbjct 369414 GACTTGGGAAACATTGAGGC 369433
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483394761747160
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