Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20melpomene_20melpomene_20[genbank_20GCA_5F000313835.2_20
2012-03-01] 4,309 sequences; 273,786,188 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq3345 194 4e-44
seq2167 114 3e-20
>seq3345
Length=207354
Score = 194 bits (214), Expect = 4e-44
Identities = 434/645 (67%), Gaps = 15/645 (2%)
Strand=Plus/Plus
Query 110520 TCTTGCTTTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAA 110579
|| ||||| ||| ||| || || || ||| ||||||||||||| |||| || | |||
Sbjct 111777 TCCTGCTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTTGATACTTTAAAA 111836
Query 110580 GAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGT----ATTCACGTT-CATGATA 110634
|| ||| | ||||||||| |||| || || ||| || ||| || ||| | |
Sbjct 111837 CAATGTGCATTAATTTCTAAATCTGCTGGTGGCATAGGTTTACATACACATTGCATCAGA 111896
Query 110635 TTCGCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAA 110694
||||| || | | || || | || || | || | ||| || || ||||
Sbjct 111897 ---GCTCAG--GGTTCTTACATAGCTGGCACTAATGGGGTCTCGAATGGTCTAGTGCCAA 111951
Query 110695 TGTTAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGGTAAGAGAAAT---G 110751
|||| ||||| | ||| | ||||| | |||||| |||||||||| || | | | |
Sbjct 111952 TGTTGAGAGTGTATAACAATACTGCCAGATATGTAGATCAAGGTGGAAACAAACGTCCCG 112011
Query 110752 GCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTC 110811
| ||||||| || ||| | || ||||||||| |||| |||||||||||||| || |
Sbjct 112012 GTGCATTTGCGATTTATTTAGAGCCTTGGCATGCAGACATATTTGAATTCTTGGATTTAA 112071
Query 110812 GTAAAAATCAAGGATTTG-AAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATT 110870
|| || || || | | ||||| ||||| | || | |||||||| | |||||
Sbjct 112072 AGAAGAA-CACGGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCCTTATGGATA 112130
Query 110871 TCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCAT 110930
||||| | || |||||| | || || | ||| | ||| ||| ||||||||||||
Sbjct 112131 CCAGATCTGTTTATGAAAAGAGTAGAAAAGGATGAAGTTTGGAGTCTCATGTGTCCTCAT 112190
Query 110931 CGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATAT 110990
|| |||||| || |||| | |||| | || |||||||| || || | ||||||
Sbjct 112191 GATTGTCCTGGCCTCGCTGACTGCTTTGGAGAGGAATTTGAAGAACTATATGCCAAATAT 112250
Query 110991 GAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTT 111050
||| ||||| ||| |||||| | ||||||||| | ||| ||| |
Sbjct 112251 GAAGAAGAAAAACGATTTATAAAACAAGTCAGAGCTCAAGAGTTATGGAAGTCAATTATA 112310
Query 111051 GAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAA 111110
||| | ||||| || ||||| || || || || |||||||| ||| | ||| | ||
Sbjct 112311 GAAGCCCAAGTAGAGACTGGTACACCATACATGTTGTATAAGGATGCTTGTAACAGAAAG 112370
Query 111111 TCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
|||||||| ||| | || || ||||| | ||| ||| | |||
Sbjct 112371 AGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 112415
>seq2167
Length=747338
Score = 114 bits (126), Expect = 3e-20
Identities = 340/510 (67%), Gaps = 26/510 (5%)
Strand=Plus/Minus
Query 304988 AAAGGTAAAGAGGGTCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCA 305047
||||||||||| || | || |||| ||||| |||||||| || ||||| ||| |||
Sbjct 220832 AAAGGTAAAGAAGGGAGAATCAGAGGAAATCTTATGGGAAAGCGAGTTGACTTTTCTGCC 220773
Query 305048 AGAAGTGTAATCACACCTGATTCTCAAATTA-GTCTTCATGAATTAGGAGTTCCAATTGA 305106
|||| |||||||| |||||| || || ||| || || || || ||||||| ||
Sbjct 220772 AGAACCGTAATCACTCCTGATCCT-AATTTACGTATTGATCAAGTAGGAGTGCCTCGCTC 220714
Query 305107 AATTGCTTTAAAACTAACATTTCCAGAGAAAGTTA-ACGAGAAAAATATTAAACATTTG- 305164
|||||| ||| ||||||| ||||| ||| | || | || ||| | | ||
Sbjct 220713 TATTGCTCAAAATTTAACATTCCCAGAACTAGTAACACCATTTAA-TATAGACCGAATGC 220655
Query 305165 AGACGTTGTGTTCTTAATGGAAATAGCAAGTATCCAGGTGCTCGTGCTGTTATAAAACAC 305224
|| |||| |||| || |||||| ||||||||||||| |||| | |
Sbjct 220654 AGGAGTTG-GTTCGTAGGGGAAATGCGCAGTATCCAGGTGCAAAG-----TATATAGTCC 220601
Query 305225 AAGCAAAAGAAGACA----ATATCTTTGAACCATATCGATTTAAAACAATTCAGTAAAAT 305280
|| || | ||| | | ||||| | | || || ||| | || ||| | |
Sbjct 220600 GAGATAATGGAGAAAGAATAGATCTTAGG----TTTC-ATCCAAAGCCAT-CAG--ATTT 220549
Query 305281 GC-TTGAAATTAATGATATT--GTTATCAGACATTTGAATGACAATGATTGGGTTCTGTT 305337
|| || | | || |||| || | || |||| ||| | |||| |||| | ||
Sbjct 220548 GCATTTACAATATGGATACAAAGTGGAGCGTCACTTGAGAGACGACGATTTGGTTATTTT 220489
Query 305338 CAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATC 305397
|||| | || ||| | |||| |||||| |||||||| ||| | || |||||||| |
Sbjct 220488 CAATCGACAGCCAACTTTGCACAAAATGAGTATGATGGGTCACAGGGTGAAAGTATTGCC 220429
Query 305398 TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGG 305457
| | |||||||| | ||| | ||| | |||| || ||||| |||||||| ||
Sbjct 220428 GTGGTCTACATTTCGTATGAATTTGAGTTGCACTTCGCCATACAATGCTGATTTTGACGG 220369
Query 305458 AGATGAAATGAATATGCATGTACCTCAATC 305487
|| ||||||||| | ||||||||||||||
Sbjct 220368 CGACGAAATGAATTTACATGTACCTCAATC 220339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186747277177949
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |